RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 NSUN6Q8TEA1 469 aaKnown RBP15.18■□□□□ 0.02
CCDC40-205ENST00000571028 DHX38Q92620 1227 aaKnown RBP15.18■□□□□ 0.02
CCDC40-205ENST00000571028 YME1L1Q96TA2 773 aa15.18■□□□□ 0.02
CCDC40-205ENST00000571028 NSUN3Q9H649 340 aaKnown RBP15.18■□□□□ 0.02
CCDC40-205ENST00000571028 RIC8AQ9NPQ8 531 aa15.18■□□□□ 0.02
CCDC40-205ENST00000571028 GTF2IRD1Q9UHL9 959 aa15.18■□□□□ 0.02
CCDC40-205ENST00000571028 SCN10AQ9Y5Y9 1956 aa15.18■□□□□ 0.02
CCDC40-205ENST00000571028 EMSYQ7Z589 1322 aa15.17■□□□□ 0.02
CCDC40-205ENST00000571028 SPDYE3A6NKU9 549 aa15.17■□□□□ 0.02
CCDC40-205ENST00000571028 LGR5O75473 907 aa15.17■□□□□ 0.02
CCDC40-205ENST00000571028 XBP1P17861 261 aa15.17■□□□□ 0.02
CCDC40-205ENST00000571028 EDNRBP24530 442 aa15.17■□□□□ 0.02
CCDC40-205ENST00000571028 PTPN5P54829 565 aa15.17■□□□□ 0.02
CCDC40-205ENST00000571028 GUCY1B3Q02153 619 aa15.17■□□□□ 0.02
CCDC40-205ENST00000571028 PTK7Q13308 1070 aa15.17■□□□□ 0.02
CCDC40-205ENST00000571028 GPM6BQ13491 265 aa15.17■□□□□ 0.02
CCDC40-205ENST00000571028 TRIM29Q14134 588 aa15.17■□□□□ 0.02
CCDC40-205ENST00000571028 DGKDQ16760 1214 aa15.17■□□□□ 0.02
CCDC40-205ENST00000571028 TCEAL5Q5H9L2 206 aa15.17■□□□□ 0.02
CCDC40-205ENST00000571028 SEPT14Q6ZU15 432 aa15.17■□□□□ 0.02
CCDC40-205ENST00000571028 DHX37Q8IY37 1157 aaKnown RBP15.17■□□□□ 0.02
CCDC40-205ENST00000571028 RASGRP4Q8TDF6 673 aa15.17■□□□□ 0.02
CCDC40-205ENST00000571028 LLPHQ9BRT6 129 aaKnown RBP15.17■□□□□ 0.02
CCDC40-205ENST00000571028 PCDHA6Q9UN73 950 aa15.17■□□□□ 0.02
CCDC40-205ENST00000571028 PCDHA8Q9Y5H6 950 aa15.17■□□□□ 0.02
CCDC40-205ENST00000571028 K7ELQ4 463 aaPredicted RBP15.16■□□□□ 0.02
CCDC40-205ENST00000571028 NCK2O43639 380 aa15.16■□□□□ 0.02
CCDC40-205ENST00000571028 ARIH2O95376 493 aa15.16■□□□□ 0.02
CCDC40-205ENST00000571028 NR3C2P08235 984 aa15.16■□□□□ 0.02
CCDC40-205ENST00000571028 GNA11P29992 359 aa15.16■□□□□ 0.02
CCDC40-205ENST00000571028 TCTN1Q2MV58 587 aa15.16■□□□□ 0.02
CCDC40-205ENST00000571028 ZNF618Q5T7W0 954 aa15.16■□□□□ 0.02
CCDC40-205ENST00000571028 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.16■□□□□ 0.02
CCDC40-205ENST00000571028 SAMD3Q8N6K7 520 aa15.16■□□□□ 0.02
CCDC40-205ENST00000571028 CTAGE1Q96RT6 745 aa15.16■□□□□ 0.02
CCDC40-205ENST00000571028 SH3GLB2Q9NR46 395 aa15.16■□□□□ 0.02
CCDC40-205ENST00000571028 PXMP2Q9NR77 195 aa15.16■□□□□ 0.02
CCDC40-205ENST00000571028 MAP3K20Q9NYL2 800 aaKnown RBP15.16■□□□□ 0.02
CCDC40-205ENST00000571028 HDAC6Q9UBN7 1215 aa15.16■□□□□ 0.02
CCDC40-205ENST00000571028 MUTYHQ9UIF7 546 aa15.16■□□□□ 0.02
CCDC40-205ENST00000571028 SMC3Q9UQE7 1217 aa15.16■□□□□ 0.02
CCDC40-205ENST00000571028 C19orf67A6NJJ6 358 aa15.15■□□□□ 0.02
CCDC40-205ENST00000571028 H3BNC9 293 aa15.15■□□□□ 0.02
CCDC40-205ENST00000571028 PIK3CDO00329 1044 aa15.15■□□□□ 0.02
CCDC40-205ENST00000571028 IRS1P35568 1242 aa15.15■□□□□ 0.02
CCDC40-205ENST00000571028 PSEN2P49810 448 aa15.15■□□□□ 0.02
CCDC40-205ENST00000571028 HMGN5P82970 282 aaKnown RBP15.15■□□□□ 0.02
CCDC40-205ENST00000571028 PGM5Q15124 567 aa15.15■□□□□ 0.02
CCDC40-205ENST00000571028 LY6KQ17RY6 165 aa15.15■□□□□ 0.02
CCDC40-205ENST00000571028 BLIDQ8IZY5 108 aa15.15■□□□□ 0.02
CCDC40-205ENST00000571028 SPRYD3Q8NCJ5 442 aa15.15■□□□□ 0.02
CCDC40-205ENST00000571028 IL31RAQ8NI17 732 aa15.15■□□□□ 0.02
CCDC40-205ENST00000571028 PRRX2Q99811 253 aa15.15■□□□□ 0.02
CCDC40-205ENST00000571028 PDCD2LQ9BRP1 358 aa15.15■□□□□ 0.02
CCDC40-205ENST00000571028 ZMYND12Q9H0C1 365 aa15.15■□□□□ 0.02
CCDC40-205ENST00000571028 RTEL1Q9NZ71 1219 aa15.15■□□□□ 0.02
CCDC40-205ENST00000571028 BRWD1Q9NSI6 2320 aa15.15■□□□□ 0.02
CCDC40-205ENST00000571028 ESYT2A0FGR8 921 aa15.14■□□□□ 0.01
CCDC40-205ENST00000571028 HSP90AA1P07900 732 aaKnown RBP15.14■□□□□ 0.01
CCDC40-205ENST00000571028 GJB2P29033 226 aa15.14■□□□□ 0.01
CCDC40-205ENST00000571028 HTRA4P83105 476 aaPredicted RBP15.14■□□□□ 0.01
CCDC40-205ENST00000571028 GHRHRQ02643 423 aa15.14■□□□□ 0.01
CCDC40-205ENST00000571028 ARHGAP1Q07960 439 aa15.14■□□□□ 0.01
CCDC40-205ENST00000571028 MFSD10Q14728 455 aa15.14■□□□□ 0.01
CCDC40-205ENST00000571028 CLUL1Q15846 466 aa15.14■□□□□ 0.01
CCDC40-205ENST00000571028 KIAA0753Q2KHM9 967 aa15.14■□□□□ 0.01
CCDC40-205ENST00000571028 RPAINQ86UA6 219 aa15.14■□□□□ 0.01
CCDC40-205ENST00000571028 SUGP1Q8IWZ8 645 aaKnown RBP15.14■□□□□ 0.01
CCDC40-205ENST00000571028 TMEM192Q8IY95 271 aa15.14■□□□□ 0.01
CCDC40-205ENST00000571028 REXO1Q8N1G1 1221 aaKnown RBP15.14■□□□□ 0.01
CCDC40-205ENST00000571028 DBF4BQ8NFT6 615 aa15.14■□□□□ 0.01
CCDC40-205ENST00000571028 BICD2Q8TD16 824 aa15.14■□□□□ 0.01
CCDC40-205ENST00000571028 SP7Q8TDD2 431 aaPredicted RBP15.14■□□□□ 0.01
CCDC40-205ENST00000571028 KAT2BQ92831 832 aa15.14■□□□□ 0.01
CCDC40-205ENST00000571028 SNX21Q969T3 373 aa15.14■□□□□ 0.01
CCDC40-205ENST00000571028 C8orf76Q96K31 380 aa15.14■□□□□ 0.01
CCDC40-205ENST00000571028 ANO3Q9BYT9 981 aa15.14■□□□□ 0.01
CCDC40-205ENST00000571028 MAF1Q9H063 256 aa15.14■□□□□ 0.01
CCDC40-205ENST00000571028 GLT8D2Q9H1C3 349 aa15.14■□□□□ 0.01
CCDC40-205ENST00000571028 EHMT1Q9H9B1 1298 aa15.14■□□□□ 0.01
CCDC40-205ENST00000571028 PCDHA4Q9UN74 947 aa15.14■□□□□ 0.01
CCDC40-205ENST00000571028 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.14■□□□□ 0.01
CCDC40-205ENST00000571028 SIP14410 1827 aa15.14■□□□□ 0.01
CCDC40-205ENST00000571028 PTPRSQ13332 1948 aa15.13■□□□□ 0.01
CCDC40-205ENST00000571028 TET1Q8NFU7 2136 aa15.13■□□□□ 0.01
CCDC40-205ENST00000571028 WDFY4Q6ZS81 3184 aa15.13■□□□□ 0.01
CCDC40-205ENST00000571028 RSPH10B2B2RC85 870 aa15.13■□□□□ 0.01
CCDC40-205ENST00000571028 UPP2O95045 317 aa15.13■□□□□ 0.01
CCDC40-205ENST00000571028 RSPH10BP0C881 870 aa15.13■□□□□ 0.01
CCDC40-205ENST00000571028 ZNF286BP0CG31 522 aa15.13■□□□□ 0.01
CCDC40-205ENST00000571028 CCND2P30279 289 aa15.13■□□□□ 0.01
CCDC40-205ENST00000571028 THPOP40225 353 aa15.13■□□□□ 0.01
CCDC40-205ENST00000571028 STXBP2Q15833 593 aa15.13■□□□□ 0.01
CCDC40-205ENST00000571028 HERC4Q5GLZ8 1057 aaPredicted RBP15.13■□□□□ 0.01
CCDC40-205ENST00000571028 CCDC62Q6P9F0 684 aa15.13■□□□□ 0.01
CCDC40-205ENST00000571028 IWS1Q96ST2 819 aa15.13■□□□□ 0.01
CCDC40-205ENST00000571028 PHOX2BQ99453 314 aa15.13■□□□□ 0.01
CCDC40-205ENST00000571028 PHF20Q9BVI0 1012 aa15.13■□□□□ 0.01
CCDC40-205ENST00000571028 LCTP09848 1927 aa15.13■□□□□ 0.01
CCDC40-205ENST00000571028 MBTPS1Q14703 1052 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms