RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 GNA14O95837 355 aa16.84■□□□□ 0.29
SMG6-207ENST00000570756 ZNF34Q8IZ26 560 aa16.84■□□□□ 0.29
SMG6-207ENST00000570756 GJD4Q96KN9 370 aaPredicted RBP16.84■□□□□ 0.29
SMG6-207ENST00000570756 AP1M1Q9BXS5 423 aa16.84■□□□□ 0.29
SMG6-207ENST00000570756 PACSIN1Q9BY11 444 aa16.84■□□□□ 0.29
SMG6-207ENST00000570756 CRNKL1Q9BZJ0 848 aaKnown RBP16.84■□□□□ 0.29
SMG6-207ENST00000570756 DDX47Q9H0S4 455 aaKnown RBP16.84■□□□□ 0.29
SMG6-207ENST00000570756 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.84■□□□□ 0.29
SMG6-207ENST00000570756 SHANK3Q9BYB0 1731 aa16.84■□□□□ 0.29
SMG6-207ENST00000570756 CCDC88AQ3V6T2 1871 aa16.84■□□□□ 0.29
SMG6-207ENST00000570756 FRMD3A2A2Y4 597 aa16.84■□□□□ 0.29
SMG6-207ENST00000570756 DCDC2CA8MYV0 355 aa16.84■□□□□ 0.29
SMG6-207ENST00000570756 ARID5AQ03989 594 aa16.84■□□□□ 0.29
SMG6-207ENST00000570756 CHRNDQ07001 517 aa16.84■□□□□ 0.29
SMG6-207ENST00000570756 NEK8Q86SG6 692 aa16.84■□□□□ 0.29
SMG6-207ENST00000570756 SEC14L1Q92503 715 aa16.84■□□□□ 0.29
SMG6-207ENST00000570756 SAMD15Q9P1V8 674 aa16.84■□□□□ 0.29
SMG6-207ENST00000570756 RGS17Q9UGC6 210 aaPredicted RBP16.84■□□□□ 0.29
SMG6-207ENST00000570756 DYMQ7RTS9 669 aa16.83■□□□□ 0.28
SMG6-207ENST00000570756 MYOCDQ8IZQ8 938 aa16.83■□□□□ 0.28
SMG6-207ENST00000570756 FAM133AQ8N9E0 248 aa16.83■□□□□ 0.28
SMG6-207ENST00000570756 LMBR1Q8WVP7 490 aa16.83■□□□□ 0.28
SMG6-207ENST00000570756 CEP63Q96MT8 703 aa16.83■□□□□ 0.28
SMG6-207ENST00000570756 ATP8A2Q9NTI2 1148 aa16.83■□□□□ 0.28
SMG6-207ENST00000570756 FLT3P36888 993 aa16.82■□□□□ 0.28
SMG6-207ENST00000570756 DZIP3Q86Y13 1208 aaKnown RBP16.82■□□□□ 0.28
SMG6-207ENST00000570756 NSMCE1Q8WV22 266 aa16.82■□□□□ 0.28
SMG6-207ENST00000570756 ZNF317Q96PQ6 595 aaPredicted RBP16.82■□□□□ 0.28
SMG6-207ENST00000570756 DCP1AQ9NPI6 582 aaPredicted RBP16.82■□□□□ 0.28
SMG6-207ENST00000570756 BLOC1S4Q9NUP1 217 aa16.82■□□□□ 0.28
SMG6-207ENST00000570756 TRAF5O00463 557 aa16.82■□□□□ 0.28
SMG6-207ENST00000570756 ECM2O94769 699 aaPredicted RBP16.82■□□□□ 0.28
SMG6-207ENST00000570756 MMEP08473 750 aa16.82■□□□□ 0.28
SMG6-207ENST00000570756 EPS15P42566 896 aa16.82■□□□□ 0.28
SMG6-207ENST00000570756 MYO1EQ12965 1108 aa16.82■□□□□ 0.28
SMG6-207ENST00000570756 GRB10Q13322 594 aa16.82■□□□□ 0.28
SMG6-207ENST00000570756 LRRC57Q8N9N7 239 aa16.82■□□□□ 0.28
SMG6-207ENST00000570756 TCP11Q8WWU5 503 aa16.82■□□□□ 0.28
SMG6-207ENST00000570756 ZMYND12Q9H0C1 365 aa16.82■□□□□ 0.28
SMG6-207ENST00000570756 AMACRQ9UHK6 382 aa16.82■□□□□ 0.28
SMG6-207ENST00000570756 C15orf41Q9Y2V0 281 aa16.82■□□□□ 0.28
SMG6-207ENST00000570756 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.82■□□□□ 0.28
SMG6-207ENST00000570756 BZW2Q9Y6E2 419 aaKnown RBP16.82■□□□□ 0.28
SMG6-207ENST00000570756 TOGARAM1Q9Y4F4 1720 aa16.82■□□□□ 0.28
SMG6-207ENST00000570756 WNK3Q9BYP7 1800 aa16.82■□□□□ 0.28
SMG6-207ENST00000570756 PPFIA2O75334 1257 aa16.81■□□□□ 0.28
SMG6-207ENST00000570756 CLTAP09496 248 aa16.81■□□□□ 0.28
SMG6-207ENST00000570756 GNA11P29992 359 aa16.81■□□□□ 0.28
SMG6-207ENST00000570756 TMEM266Q2M3C6 531 aa16.81■□□□□ 0.28
SMG6-207ENST00000570756 ACCSLQ4AC99 568 aa16.81■□□□□ 0.28
SMG6-207ENST00000570756 SBK1Q52WX2 424 aa16.81■□□□□ 0.28
SMG6-207ENST00000570756 PNMA8AQ86V59 439 aaPredicted RBP16.81■□□□□ 0.28
SMG6-207ENST00000570756 METTL13Q8N6R0 699 aa16.81■□□□□ 0.28
SMG6-207ENST00000570756 FMO2Q99518 471 aa16.81■□□□□ 0.28
SMG6-207ENST00000570756 RAB34Q9BZG1 259 aa16.81■□□□□ 0.28
SMG6-207ENST00000570756 NSRP1Q9H0G5 558 aaKnown RBP16.81■□□□□ 0.28
SMG6-207ENST00000570756 RAB17Q9H0T7 212 aa16.81■□□□□ 0.28
SMG6-207ENST00000570756 MAD2L2Q9UI95 211 aa16.81■□□□□ 0.28
SMG6-207ENST00000570756 TRPC5Q9UL62 973 aaPredicted RBP16.81■□□□□ 0.28
SMG6-207ENST00000570756 ENOX2Q16206 610 aaKnown RBP16.81■□□□□ 0.28
SMG6-207ENST00000570756 DDB1Q16531 1140 aa16.81■□□□□ 0.28
SMG6-207ENST00000570756 PEX26Q7Z412 305 aa16.81■□□□□ 0.28
SMG6-207ENST00000570756 PIGWQ7Z7B1 504 aa16.81■□□□□ 0.28
SMG6-207ENST00000570756 SYCE1Q8N0S2 351 aa16.81■□□□□ 0.28
SMG6-207ENST00000570756 RASGEF1CQ8N431 466 aa16.81■□□□□ 0.28
SMG6-207ENST00000570756 MDM1Q8TC05 714 aa16.81■□□□□ 0.28
SMG6-207ENST00000570756 PIGBQ92521 554 aa16.81■□□□□ 0.28
SMG6-207ENST00000570756 STAMBPL1Q96FJ0 436 aa16.81■□□□□ 0.28
SMG6-207ENST00000570756 LZTS2Q9BRK4 669 aa16.81■□□□□ 0.28
SMG6-207ENST00000570756 SLC24A3Q9HC58 644 aa16.81■□□□□ 0.28
SMG6-207ENST00000570756 C6orf50Q9HD87 102 aa16.81■□□□□ 0.28
SMG6-207ENST00000570756 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.81■□□□□ 0.28
SMG6-207ENST00000570756 CYP19A1P11511 503 aaPredicted RBP16.8■□□□□ 0.28
SMG6-207ENST00000570756 CHN1P15882 459 aa16.8■□□□□ 0.28
SMG6-207ENST00000570756 NAPAP54920 295 aa16.8■□□□□ 0.28
SMG6-207ENST00000570756 ZCWPW2Q504Y3 356 aa16.8■□□□□ 0.28
SMG6-207ENST00000570756 CAVIN4Q5BKX8 364 aa16.8■□□□□ 0.28
SMG6-207ENST00000570756 NOP53Q9NZM5 478 aaKnown RBP16.8■□□□□ 0.28
SMG6-207ENST00000570756 PNMA2Q9UL42 364 aa16.8■□□□□ 0.28
SMG6-207ENST00000570756 ATP8B3O60423 1300 aa16.8■□□□□ 0.28
SMG6-207ENST00000570756 GOLGA6L10A0A0M3HER8 536 aa16.8■□□□□ 0.28
SMG6-207ENST00000570756 CCDC169A6NNP5 214 aa16.8■□□□□ 0.28
SMG6-207ENST00000570756 TTI1O43156 1089 aa16.8■□□□□ 0.28
SMG6-207ENST00000570756 GYG1P46976 350 aa16.8■□□□□ 0.28
SMG6-207ENST00000570756 SEPT2Q15019 361 aa16.8■□□□□ 0.28
SMG6-207ENST00000570756 TRPM8Q7Z2W7 1104 aa16.8■□□□□ 0.28
SMG6-207ENST00000570756 CROCCP2Q86T23 111 aa16.8■□□□□ 0.28
SMG6-207ENST00000570756 RAD54LQ92698 747 aa16.8■□□□□ 0.28
SMG6-207ENST00000570756 DDX12PQ92771 950 aa16.8■□□□□ 0.28
SMG6-207ENST00000570756 PGM2Q96G03 612 aa16.8■□□□□ 0.28
SMG6-207ENST00000570756 SPAG5Q96R06 1193 aa16.8■□□□□ 0.28
SMG6-207ENST00000570756 SUCLA2Q9P2R7 463 aaPredicted RBP16.8■□□□□ 0.28
SMG6-207ENST00000570756 ZBTB1Q9Y2K1 713 aa16.8■□□□□ 0.28
SMG6-207ENST00000570756 ATP8A1Q9Y2Q0 1164 aa16.8■□□□□ 0.28
SMG6-207ENST00000570756 ANP32DO95626 131 aa16.79■□□□□ 0.28
SMG6-207ENST00000570756 NUDT17P0C025 328 aa16.79■□□□□ 0.28
SMG6-207ENST00000570756 ANXA13P27216 316 aa16.79■□□□□ 0.28
SMG6-207ENST00000570756 TXKP42681 527 aa16.79■□□□□ 0.28
SMG6-207ENST00000570756 MMP13P45452 471 aa16.79■□□□□ 0.28
SMG6-207ENST00000570756 MARSP56192 900 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms