RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 IWS1Q96ST2 819 aa12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 DUSP9Q99956 384 aaKnown RBP12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 SEMA6BQ9H3T3 888 aa12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 STXBP2Q15833 593 aa12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 FAM26FQ5R3K3 315 aa12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 ANKRD40Q6AI12 368 aa12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 SEPT14Q6ZU15 432 aa12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 TRMT1LQ7Z2T5 733 aaKnown RBP12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 IRF2BP1Q8IU81 584 aa12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 P2RX5Q93086 422 aa12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 MMP19Q99542 508 aa12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 SH2D3AQ9BRG2 576 aa12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 MYH11P35749 1972 aa12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 SPATA31C2B4DYI2 1134 aa12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 ZBTB48P10074 688 aaPredicted RBP12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 EDNRBP24530 442 aa12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 HERC4Q5GLZ8 1057 aaPredicted RBP12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 FILIP1Q7Z7B0 1213 aa12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 ANKRD23Q86SG2 305 aa12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 CCDC65Q8IXS2 484 aa12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 DHTKD1Q96HY7 919 aaPredicted RBP12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 TRIM47Q96LD4 638 aa12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 P4HBP07237 508 aaKnown RBP12.15□□□□□ -0.46
PDXDC1-216ENST00000569715 CCNE1P24864 410 aa12.15□□□□□ -0.46
PDXDC1-216ENST00000569715 COBLL1Q53SF7 1204 aa12.15□□□□□ -0.46
PDXDC1-216ENST00000569715 EEPD1Q7L9B9 569 aa12.15□□□□□ -0.46
PDXDC1-216ENST00000569715 TMC6Q7Z403 805 aa12.15□□□□□ -0.46
PDXDC1-216ENST00000569715 SFR1Q86XK3 245 aa12.15□□□□□ -0.46
PDXDC1-216ENST00000569715 NACC1Q96RE7 527 aa12.15□□□□□ -0.46
PDXDC1-216ENST00000569715 PLXNA1Q9UIW2 1896 aa12.15□□□□□ -0.46
PDXDC1-216ENST00000569715 ESPNB1AK53 854 aa12.15□□□□□ -0.46
PDXDC1-216ENST00000569715 CASP5P51878 434 aa12.15□□□□□ -0.46
PDXDC1-216ENST00000569715 KRT76Q01546 638 aa12.15□□□□□ -0.46
PDXDC1-216ENST00000569715 C1orf186Q6ZWK4 172 aa12.15□□□□□ -0.46
PDXDC1-216ENST00000569715 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.15□□□□□ -0.46
PDXDC1-216ENST00000569715 NEK9Q8TD19 979 aa12.15□□□□□ -0.46
PDXDC1-216ENST00000569715 DNAJC25-GNG10A0A024R161 153 aa12.15□□□□□ -0.47
PDXDC1-216ENST00000569715 SFI1A8K8P3 1242 aa12.15□□□□□ -0.47
PDXDC1-216ENST00000569715 WDR64B1ANS9 1081 aa12.15□□□□□ -0.47
PDXDC1-216ENST00000569715 EIF3JO75822 258 aaKnown RBP12.15□□□□□ -0.47
PDXDC1-216ENST00000569715 STAM2O75886 525 aa12.15□□□□□ -0.47
PDXDC1-216ENST00000569715 MUTP22033 750 aa12.15□□□□□ -0.47
PDXDC1-216ENST00000569715 KCTD2Q14681 263 aa12.15□□□□□ -0.47
PDXDC1-216ENST00000569715 GNPTABQ3T906 1256 aa12.15□□□□□ -0.47
PDXDC1-216ENST00000569715 RASAL3Q86YV0 1011 aa12.15□□□□□ -0.47
PDXDC1-216ENST00000569715 ZSWIM4Q9H7M6 989 aa12.15□□□□□ -0.47
PDXDC1-216ENST00000569715 RRAGDQ9NQL2 400 aaPredicted RBP12.15□□□□□ -0.47
PDXDC1-216ENST00000569715 SLC45A1Q9Y2W3 748 aa12.15□□□□□ -0.47
PDXDC1-216ENST00000569715 MAFGO15525 162 aa12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 QARSP47897 775 aaKnown RBP12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 LRMPQ12912 555 aa12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 PSMD2Q13200 908 aa12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 ZSCAN30Q86W11 494 aa12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 GUF1Q8N442 669 aaKnown RBP12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 GPRC5AQ8NFJ5 357 aa12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 SRRTQ9BXP5 876 aaKnown RBP12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 JPH1Q9HDC5 661 aaPredicted RBP12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 ADD3Q9UEY8 706 aaKnown RBP12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 ZKSCAN5Q9Y2L8 839 aa12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 PRKCSHP14314 528 aaPredicted RBP12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 JAK3P52333 1124 aa12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 KRT31Q15323 416 aa12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 ZNF746Q6NUN9 644 aaPredicted RBP12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 MROH8Q9H579 483 aa12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 TCEAL9Q9UHQ7 104 aa12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 ARID2Q68CP9 1835 aa12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 DCAF8L1A6NGE4 600 aa12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 GOLGA6L6A8MZA4 724 aa12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 KCNJ18B7U540 433 aa12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 NKRFO15226 690 aaKnown RBP eCLIP12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 TEX33O43247 280 aa12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 COPB2P35606 906 aa12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 KCNJ12Q14500 433 aa12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 UTP14CQ5TAP6 766 aaKnown RBP12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 CENPPQ6IPU0 288 aa12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 CREBRFQ8IUR6 639 aa12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 KCTD17Q8N5Z5 321 aa12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 CSGALNACT2Q8N6G5 542 aa12.14□□□□□ -0.47
PDXDC1-216ENST00000569715 NFASCO94856 1347 aa12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 A0A1B0GTH6 734 aa12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 CBFA2T2O43439 604 aa12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 ZNF157P51786 506 aaPredicted RBP12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 TCP11X2Q5H9J9 407 aa12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 PLA2G4FQ68DD2 849 aa12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 CYFIP1Q7L576 1253 aa12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 NELFCDQ8IXH7 590 aa12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 SCFD1Q8WVM8 642 aa12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 CDHR1Q96JP9 859 aa12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 TAB2Q9NYJ8 693 aa12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 SLC9A2Q9UBY0 812 aa12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 MYH9P35579 1960 aaKnown RBP12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 ARHGEF35A5YM69 484 aa12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 UBA1P22314 1058 aaKnown RBP12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 SFNP31947 248 aa12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 ICAM3P32942 547 aa12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 ACTR2P61160 394 aa12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 VSTM4Q8IW00 320 aa12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 MYOCDQ8IZQ8 938 aa12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 SHCBP1Q8NEM2 672 aa12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 CACTINQ8WUQ7 758 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms