RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 CRYGNQ8WXF5 182 aa10.64□□□□□ -0.71
UBR1-210ENST00000569337 CTAGE1Q96RT6 745 aa10.64□□□□□ -0.71
UBR1-210ENST00000569337 SDF4Q9BRK5 362 aa10.64□□□□□ -0.71
UBR1-210ENST00000569337 FTOQ9C0B1 505 aaKnown RBP eCLIP10.64□□□□□ -0.71
UBR1-210ENST00000569337 RNPEPQ9H4A4 650 aa10.64□□□□□ -0.71
UBR1-210ENST00000569337 CIZ1Q9ULV3 898 aaPredicted RBP10.64□□□□□ -0.71
UBR1-210ENST00000569337 TELO2Q9Y4R8 837 aa10.64□□□□□ -0.71
UBR1-210ENST00000569337 DOCK5Q9H7D0 1870 aa10.64□□□□□ -0.71
UBR1-210ENST00000569337 GSTTP1A0A1W2PQM5 241 aa10.63□□□□□ -0.71
UBR1-210ENST00000569337 ZBBXA8MT70 800 aa10.63□□□□□ -0.71
UBR1-210ENST00000569337 PARNO95453 639 aaKnown RBP10.63□□□□□ -0.71
UBR1-210ENST00000569337 CYP3A4P08684 503 aa10.63□□□□□ -0.71
UBR1-210ENST00000569337 CKBP12277 381 aa10.63□□□□□ -0.71
UBR1-210ENST00000569337 ACTN1P12814 892 aa10.63□□□□□ -0.71
UBR1-210ENST00000569337 SELPP16109 830 aa10.63□□□□□ -0.71
UBR1-210ENST00000569337 INF2Q27J81 1249 aa10.63□□□□□ -0.71
UBR1-210ENST00000569337 RASIP1Q5U651 963 aa10.63□□□□□ -0.71
UBR1-210ENST00000569337 LRRC8DQ7L1W4 858 aa10.63□□□□□ -0.71
UBR1-210ENST00000569337 NIPA1Q7RTP0 329 aa10.63□□□□□ -0.71
UBR1-210ENST00000569337 KRT25Q7Z3Z0 450 aa10.63□□□□□ -0.71
UBR1-210ENST00000569337 PLA2G4DQ86XP0 818 aa10.63□□□□□ -0.71
UBR1-210ENST00000569337 TBCKQ8TEA7 893 aa10.63□□□□□ -0.71
UBR1-210ENST00000569337 DHX38Q92620 1227 aaKnown RBP10.63□□□□□ -0.71
UBR1-210ENST00000569337 GLG1Q92896 1179 aa10.63□□□□□ -0.71
UBR1-210ENST00000569337 ATP6V0A1Q93050 837 aa10.63□□□□□ -0.71
UBR1-210ENST00000569337 FAM161BQ96MY7 647 aa10.63□□□□□ -0.71
UBR1-210ENST00000569337 BRMS1Q9HCU9 246 aa10.63□□□□□ -0.71
UBR1-210ENST00000569337 JPH1Q9HDC5 661 aaPredicted RBP10.63□□□□□ -0.71
UBR1-210ENST00000569337 SETD4Q9NVD3 440 aa10.63□□□□□ -0.71
UBR1-210ENST00000569337 MTMR10Q9NXD2 777 aa10.63□□□□□ -0.71
UBR1-210ENST00000569337 CXXC1Q9P0U4 656 aaPredicted RBP10.63□□□□□ -0.71
UBR1-210ENST00000569337 SLC9A2Q9UBY0 812 aa10.63□□□□□ -0.71
UBR1-210ENST00000569337 SLC4A7Q9Y6M7 1214 aa10.63□□□□□ -0.71
UBR1-210ENST00000569337 SZT2Q5T011 3432 aa10.62□□□□□ -0.71
UBR1-210ENST00000569337 NFASCO94856 1347 aa10.62□□□□□ -0.71
UBR1-210ENST00000569337 CCDC194A0A1B0GVG4 234 aa10.62□□□□□ -0.71
UBR1-210ENST00000569337 FAM86B1E9PN63 330 aa10.62□□□□□ -0.71
UBR1-210ENST00000569337 TREHO43280 583 aa10.62□□□□□ -0.71
UBR1-210ENST00000569337 FAM86B2P0C5J1 330 aa10.62□□□□□ -0.71
UBR1-210ENST00000569337 DNAJB2P25686 324 aa10.62□□□□□ -0.71
UBR1-210ENST00000569337 NUCB2P80303 420 aa10.62□□□□□ -0.71
UBR1-210ENST00000569337 RBL2Q08999 1139 aa10.62□□□□□ -0.71
UBR1-210ENST00000569337 HIC1Q14526 733 aa10.62□□□□□ -0.71
UBR1-210ENST00000569337 NBR1Q14596 966 aa10.62□□□□□ -0.71
UBR1-210ENST00000569337 NONOQ15233 471 aaKnown RBP eCLIP10.62□□□□□ -0.71
UBR1-210ENST00000569337 FOXD4L6Q3SYB3 417 aaPredicted RBP10.62□□□□□ -0.71
UBR1-210ENST00000569337 FOXD4L3Q6VB84 417 aaPredicted RBP10.62□□□□□ -0.71
UBR1-210ENST00000569337 VWCEQ96DN2 955 aa10.62□□□□□ -0.71
UBR1-210ENST00000569337 SMARCAD1Q9H4L7 1026 aa10.62□□□□□ -0.71
UBR1-210ENST00000569337 AZI2Q9H6S1 392 aa10.62□□□□□ -0.71
UBR1-210ENST00000569337 AGO4Q9HCK5 861 aaKnown RBP10.62□□□□□ -0.71
UBR1-210ENST00000569337 ERAP1Q9NZ08 941 aa10.62□□□□□ -0.71
UBR1-210ENST00000569337 CHMP5Q9NZZ3 219 aa10.62□□□□□ -0.71
UBR1-210ENST00000569337 NRCAMQ92823 1304 aa10.61□□□□□ -0.71
UBR1-210ENST00000569337 SCN10AQ9Y5Y9 1956 aa10.61□□□□□ -0.71
UBR1-210ENST00000569337 TMEM265A0A087WTH1 108 aa10.61□□□□□ -0.71
UBR1-210ENST00000569337 GRXCR1A8MXD5 290 aa10.61□□□□□ -0.71
UBR1-210ENST00000569337 DDX39AO00148 427 aaKnown RBP10.61□□□□□ -0.71
UBR1-210ENST00000569337 IPO5O00410 1097 aaKnown RBP10.61□□□□□ -0.71
UBR1-210ENST00000569337 PDIA4P13667 645 aaKnown RBP10.61□□□□□ -0.71
UBR1-210ENST00000569337 ATP2B1P20020 1258 aa10.61□□□□□ -0.71
UBR1-210ENST00000569337 MARK3P27448 753 aa10.61□□□□□ -0.71
UBR1-210ENST00000569337 HOXC8P31273 242 aa10.61□□□□□ -0.71
UBR1-210ENST00000569337 THPOP40225 353 aa10.61□□□□□ -0.71
UBR1-210ENST00000569337 ACTR2P61160 394 aa10.61□□□□□ -0.71
UBR1-210ENST00000569337 SETQ01105 290 aaPredicted RBP10.61□□□□□ -0.71
UBR1-210ENST00000569337 ITGB3BPQ13352 177 aaPredicted RBP10.61□□□□□ -0.71
UBR1-210ENST00000569337 GNL2Q13823 731 aaKnown RBP10.61□□□□□ -0.71
UBR1-210ENST00000569337 TRIM71Q2Q1W2 868 aaKnown RBP10.61□□□□□ -0.71
UBR1-210ENST00000569337 ZNF618Q5T7W0 954 aa10.61□□□□□ -0.71
UBR1-210ENST00000569337 BRAPQ7Z569 592 aa10.61□□□□□ -0.71
UBR1-210ENST00000569337 SERINC5Q86VE9 423 aa10.61□□□□□ -0.71
UBR1-210ENST00000569337 TNPO1Q92973 898 aaKnown RBP10.61□□□□□ -0.71
UBR1-210ENST00000569337 WNT8BQ93098 351 aa10.61□□□□□ -0.71
UBR1-210ENST00000569337 ZNF577Q9BSK1 485 aa10.61□□□□□ -0.71
UBR1-210ENST00000569337 SEMA6BQ9H3T3 888 aa10.61□□□□□ -0.71
UBR1-210ENST00000569337 ZSCAN16Q9H4T2 348 aaPredicted RBP10.61□□□□□ -0.71
UBR1-210ENST00000569337 TBC1D22BQ9NU19 505 aa10.61□□□□□ -0.71
UBR1-210ENST00000569337 MSRAQ9UJ68 235 aa10.61□□□□□ -0.71
UBR1-210ENST00000569337 PCDHB6Q9Y5E3 794 aa10.61□□□□□ -0.71
UBR1-210ENST00000569337 IGLV3-22A0A075B6J6 115 aa10.6□□□□□ -0.71
UBR1-210ENST00000569337 RSPH10B2B2RC85 870 aa10.6□□□□□ -0.71
UBR1-210ENST00000569337 LGR5O75473 907 aa10.6□□□□□ -0.71
UBR1-210ENST00000569337 TDP2O95551 362 aa10.6□□□□□ -0.71
UBR1-210ENST00000569337 RSPH10BP0C881 870 aa10.6□□□□□ -0.71
UBR1-210ENST00000569337 ATP2A2P16615 1042 aaKnown RBP10.6□□□□□ -0.71
UBR1-210ENST00000569337 CIITAP33076 1130 aa10.6□□□□□ -0.71
UBR1-210ENST00000569337 STAT5BP51692 787 aa10.6□□□□□ -0.71
UBR1-210ENST00000569337 USP11P51784 963 aa10.6□□□□□ -0.71
UBR1-210ENST00000569337 DNM1Q05193 864 aaKnown RBP10.6□□□□□ -0.71
UBR1-210ENST00000569337 PPFIA1Q13136 1202 aa10.6□□□□□ -0.71
UBR1-210ENST00000569337 RAB30Q15771 203 aa10.6□□□□□ -0.71
UBR1-210ENST00000569337 PRR16Q569H4 304 aa10.6□□□□□ -0.71
UBR1-210ENST00000569337 NEK8Q86SG6 692 aa10.6□□□□□ -0.71
UBR1-210ENST00000569337 LMBR1Q8WVP7 490 aa10.6□□□□□ -0.71
UBR1-210ENST00000569337 LENG9Q96B70 501 aa10.6□□□□□ -0.71
UBR1-210ENST00000569337 TIFAQ96CG3 184 aa10.6□□□□□ -0.71
UBR1-210ENST00000569337 UIMC1Q96RL1 719 aa10.6□□□□□ -0.71
UBR1-210ENST00000569337 USP28Q96RU2 1077 aa10.6□□□□□ -0.71
UBR1-210ENST00000569337 PBX4Q9BYU1 374 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms