RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 ATP2C1P98194 919 aaPredicted RBP18.03■□□□□ 0.48
USB1-215ENST00000569252 TLE2Q04725 743 aa18.03■□□□□ 0.48
USB1-215ENST00000569252 PDIA5Q14554 519 aa18.03■□□□□ 0.48
USB1-215ENST00000569252 SLC39A14Q15043 492 aa18.03■□□□□ 0.48
USB1-215ENST00000569252 TMEM63BQ5T3F8 832 aa18.03■□□□□ 0.48
USB1-215ENST00000569252 NCAPH2Q6IBW4 605 aa18.03■□□□□ 0.48
USB1-215ENST00000569252 MIER3Q7Z3K6 550 aa18.03■□□□□ 0.48
USB1-215ENST00000569252 C4orf32Q8N8J7 132 aa18.03■□□□□ 0.48
USB1-215ENST00000569252 KCNG4Q8TDN1 519 aa18.03■□□□□ 0.48
USB1-215ENST00000569252 AZI2Q9H6S1 392 aa18.03■□□□□ 0.48
USB1-215ENST00000569252 PCDHA10Q9Y5I2 948 aa18.03■□□□□ 0.48
USB1-215ENST00000569252 BACH1O14867 736 aa18.02■□□□□ 0.48
USB1-215ENST00000569252 DHX15O43143 795 aaKnown RBP18.02■□□□□ 0.48
USB1-215ENST00000569252 NASPP49321 788 aaPredicted RBP18.02■□□□□ 0.48
USB1-215ENST00000569252 ACTR2P61160 394 aa18.02■□□□□ 0.48
USB1-215ENST00000569252 FAM160B1Q5W0V3 765 aa18.02■□□□□ 0.48
USB1-215ENST00000569252 RDM1Q8NG50 284 aa18.02■□□□□ 0.48
USB1-215ENST00000569252 TNPO1Q92973 898 aaKnown RBP18.02■□□□□ 0.48
USB1-215ENST00000569252 GJA10Q969M2 543 aa18.02■□□□□ 0.48
USB1-215ENST00000569252 VTI1AQ96AJ9 217 aa18.02■□□□□ 0.48
USB1-215ENST00000569252 SPATA32Q96LK8 384 aa18.02■□□□□ 0.48
USB1-215ENST00000569252 DISC1Q9NRI5 854 aa18.02■□□□□ 0.48
USB1-215ENST00000569252 LRWD1Q9UFC0 647 aa18.02■□□□□ 0.48
USB1-215ENST00000569252 KIAA1217Q5T5P2 1943 aa18.02■□□□□ 0.47
USB1-215ENST00000569252 ELP1O95163 1332 aa18.01■□□□□ 0.47
USB1-215ENST00000569252 SYNRGQ9UMZ2 1314 aa18.01■□□□□ 0.47
USB1-215ENST00000569252 VWA3AA6NCI4 1184 aa18.01■□□□□ 0.47
USB1-215ENST00000569252 A6NJR5 290 aa18.01■□□□□ 0.47
USB1-215ENST00000569252 DKC1O60832 514 aaKnown RBP eCLIP18.01■□□□□ 0.471e-5■■■■□ 25.7
USB1-215ENST00000569252 MYL3P08590 195 aa18.01■□□□□ 0.47
USB1-215ENST00000569252 MARCKSP29966 332 aaPredicted RBP18.01■□□□□ 0.47
USB1-215ENST00000569252 ME1P48163 572 aa18.01■□□□□ 0.47
USB1-215ENST00000569252 PPP2R5CQ13362 524 aa18.01■□□□□ 0.47
USB1-215ENST00000569252 SNX17Q15036 470 aa18.01■□□□□ 0.47
USB1-215ENST00000569252 HSDL1Q3SXM5 330 aa18.01■□□□□ 0.47
USB1-215ENST00000569252 UTP14CQ5TAP6 766 aaKnown RBP18.01■□□□□ 0.47
USB1-215ENST00000569252 KRI1Q8N9T8 703 aaKnown RBP18.01■□□□□ 0.47
USB1-215ENST00000569252 USP38Q8NB14 1042 aa18.01■□□□□ 0.47
USB1-215ENST00000569252 LINC00301Q8NCQ3 95 aa18.01■□□□□ 0.47
USB1-215ENST00000569252 GLG1Q92896 1179 aa18.01■□□□□ 0.47
USB1-215ENST00000569252 GPR20Q99678 358 aa18.01■□□□□ 0.47
USB1-215ENST00000569252 FTOQ9C0B1 505 aaKnown RBP eCLIP18.01■□□□□ 0.47
USB1-215ENST00000569252 UPF3AQ9H1J1 476 aaKnown RBP18.01■□□□□ 0.47
USB1-215ENST00000569252 UNC45AQ9H3U1 944 aa18.01■□□□□ 0.47
USB1-215ENST00000569252 GOLGA6L4A6NEF3 574 aa18■□□□□ 0.47
USB1-215ENST00000569252 ADCY6O43306 1168 aa18■□□□□ 0.47
USB1-215ENST00000569252 PQBP1O60828 265 aaKnown RBP18■□□□□ 0.47
USB1-215ENST00000569252 PPP6R2O75170 966 aa18■□□□□ 0.47
USB1-215ENST00000569252 MMP3P08254 477 aa18■□□□□ 0.47
USB1-215ENST00000569252 TCF7P36402 384 aaPredicted RBP18■□□□□ 0.47
USB1-215ENST00000569252 FXR2P51116 673 aaKnown RBP eCLIP18■□□□□ 0.47
USB1-215ENST00000569252 BEX3Q00994 111 aa18■□□□□ 0.47
USB1-215ENST00000569252 KCNA10Q16322 511 aa18■□□□□ 0.47
USB1-215ENST00000569252 KRT79Q5XKE5 535 aa18■□□□□ 0.47
USB1-215ENST00000569252 AK8Q96MA6 479 aa18■□□□□ 0.47
USB1-215ENST00000569252 TSEN34Q9BSV6 310 aaKnown RBP18■□□□□ 0.47
USB1-215ENST00000569252 SMARCAD1Q9H4L7 1026 aa18■□□□□ 0.47
USB1-215ENST00000569252 BCAS3Q9H6U6 928 aa18■□□□□ 0.47
USB1-215ENST00000569252 PRDM6Q9NQX0 595 aa18■□□□□ 0.47
USB1-215ENST00000569252 RCOR1Q9UKL0 485 aa18■□□□□ 0.47
USB1-215ENST00000569252 ZNF215Q9UL58 517 aaPredicted RBP18■□□□□ 0.47
USB1-215ENST00000569252 SRPRBQ9Y5M8 271 aaKnown RBP18■□□□□ 0.47
USB1-215ENST00000569252 MUC3AQ02505 3323 aa18■□□□□ 0.47
USB1-215ENST00000569252 MOXD2PA6NHM9 499 aa17.99■□□□□ 0.47
USB1-215ENST00000569252 CABYRO75952 493 aa17.99■□□□□ 0.47
USB1-215ENST00000569252 SUPT20HL2P0C7V6 817 aa17.99■□□□□ 0.47
USB1-215ENST00000569252 LONP1P36776 959 aaKnown RBP17.99■□□□□ 0.47
USB1-215ENST00000569252 TXLNAP40222 546 aa17.99■□□□□ 0.47
USB1-215ENST00000569252 UBA7P41226 1012 aa17.99■□□□□ 0.47
USB1-215ENST00000569252 PTPAQ15257 358 aa17.99■□□□□ 0.47
USB1-215ENST00000569252 EPHA7Q15375 998 aa17.99■□□□□ 0.47
USB1-215ENST00000569252 HAUS3Q68CZ6 603 aa17.99■□□□□ 0.47
USB1-215ENST00000569252 SWSAP1Q6NVH7 229 aa17.99■□□□□ 0.47
USB1-215ENST00000569252 CKAP2LQ8IYA6 745 aa17.99■□□□□ 0.47
USB1-215ENST00000569252 KLHDC9Q8NEP7 349 aa17.99■□□□□ 0.47
USB1-215ENST00000569252 RASSF8Q8NHQ8 419 aa17.99■□□□□ 0.47
USB1-215ENST00000569252 MTG1Q9BT17 334 aaPredicted RBP17.99■□□□□ 0.47
USB1-215ENST00000569252 KATNAL1Q9BW62 490 aa17.99■□□□□ 0.47
USB1-215ENST00000569252 ZNF302Q9NR11 478 aa17.99■□□□□ 0.47
USB1-215ENST00000569252 VAV3Q9UKW4 847 aa17.99■□□□□ 0.47
USB1-215ENST00000569252 GSTTP1A0A1W2PQM5 241 aa17.98■□□□□ 0.47
USB1-215ENST00000569252 MYADML2A6NDP7 307 aa17.98■□□□□ 0.47
USB1-215ENST00000569252 ADAMTS4O75173 837 aa17.98■□□□□ 0.47
USB1-215ENST00000569252 ATG7O95352 703 aa17.98■□□□□ 0.47
USB1-215ENST00000569252 CCNE2O96020 404 aa17.98■□□□□ 0.47
USB1-215ENST00000569252 P4HBP07237 508 aaKnown RBP17.98■□□□□ 0.47
USB1-215ENST00000569252 FOSL2P15408 326 aa17.98■□□□□ 0.47
USB1-215ENST00000569252 CST5P28325 142 aaPredicted RBP17.98■□□□□ 0.47
USB1-215ENST00000569252 STAT5BP51692 787 aa17.98■□□□□ 0.47
USB1-215ENST00000569252 CHMP4BP1P59074 171 aa17.98■□□□□ 0.47
USB1-215ENST00000569252 NKX3-2P78367 333 aa17.98■□□□□ 0.47
USB1-215ENST00000569252 ABHD15Q6UXT9 468 aa17.98■□□□□ 0.47
USB1-215ENST00000569252 NEK9Q8TD19 979 aa17.98■□□□□ 0.47
USB1-215ENST00000569252 ATP6V0A1Q93050 837 aa17.98■□□□□ 0.47
USB1-215ENST00000569252 CDK5RAP3Q96JB5 506 aa17.98■□□□□ 0.47
USB1-215ENST00000569252 RNPC3Q96LT9 517 aaKnown RBP17.98■□□□□ 0.47
USB1-215ENST00000569252 GLT1D1Q96MS3 346 aa17.98■□□□□ 0.47
USB1-215ENST00000569252 GBP4Q96PP9 640 aa17.98■□□□□ 0.47
USB1-215ENST00000569252 MORC2Q9Y6X9 1032 aaPredicted RBP17.98■□□□□ 0.47
USB1-215ENST00000569252 LRRC37A2A6NM11 1700 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms