RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 DEFB103AP81534 67 aa7.03□□□□□ -1.28
CDH13-212ENST00000569144 PURAQ00577 322 aaKnown RBP7.03□□□□□ -1.28
CDH13-212ENST00000569144 SRSF11Q05519 484 aaKnown RBP7.03□□□□□ -1.28
CDH13-212ENST00000569144 TNP2Q05952 138 aa7.03□□□□□ -1.28
CDH13-212ENST00000569144 PTPN11Q06124 597 aaPredicted RBP7.03□□□□□ -1.28
CDH13-212ENST00000569144 SLFN5Q08AF3 891 aa7.03□□□□□ -1.28
CDH13-212ENST00000569144 OS9Q13438 667 aaPredicted RBP7.03□□□□□ -1.28
CDH13-212ENST00000569144 COL19A1Q14993 1142 aa7.03□□□□□ -1.28
CDH13-212ENST00000569144 PTPROQ16827 1216 aa7.03□□□□□ -1.28
CDH13-212ENST00000569144 TIGD5Q53EQ6 642 aa7.03□□□□□ -1.28
CDH13-212ENST00000569144 TAPT1Q6NXT6 567 aa7.03□□□□□ -1.28
CDH13-212ENST00000569144 C16orf86Q6ZW13 317 aa7.03□□□□□ -1.28
CDH13-212ENST00000569144 TMCO2Q7Z6W1 182 aaPredicted RBP7.03□□□□□ -1.28
CDH13-212ENST00000569144 LCORLQ8N3X6 602 aa7.03□□□□□ -1.28
CDH13-212ENST00000569144 ZSCAN1Q8NBB4 408 aa7.03□□□□□ -1.28
CDH13-212ENST00000569144 PABPC5Q96DU9 382 aaKnown RBP7.03□□□□□ -1.28
CDH13-212ENST00000569144 MRPL38Q96DV4 380 aaKnown RBP7.03□□□□□ -1.28
CDH13-212ENST00000569144 POP1Q99575 1024 aaKnown RBP7.03□□□□□ -1.28
CDH13-212ENST00000569144 MTG1Q9BT17 334 aaPredicted RBP7.03□□□□□ -1.28
CDH13-212ENST00000569144 CCDC8Q9H0W5 538 aaPredicted RBP7.03□□□□□ -1.28
CDH13-212ENST00000569144 ACAD9Q9H845 621 aa7.03□□□□□ -1.28
CDH13-212ENST00000569144 VTA1Q9NP79 307 aa7.03□□□□□ -1.28
CDH13-212ENST00000569144 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.03□□□□□ -1.28
CDH13-212ENST00000569144 PDGFCQ9NRA1 345 aa7.03□□□□□ -1.28
CDH13-212ENST00000569144 ATP8A2Q9NTI2 1148 aa7.03□□□□□ -1.28
CDH13-212ENST00000569144 ZNF318Q5VUA4 2279 aa7.03□□□□□ -1.28
CDH13-212ENST00000569144 ZNF532Q9HCE3 1301 aa7.02□□□□□ -1.28
CDH13-212ENST00000569144 TANC1Q9C0D5 1861 aa7.02□□□□□ -1.28
CDH13-212ENST00000569144 F5H6K3 240 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 PARNO95453 639 aaKnown RBP7.02□□□□□ -1.29
CDH13-212ENST00000569144 NDUFB10O96000 172 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 CPT1AP50416 773 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 CTBSQ01459 385 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 KLRC3Q07444 240 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 TTF1Q15361 905 aaPredicted RBP7.02□□□□□ -1.29
CDH13-212ENST00000569144 SMAD2Q15796 467 aaKnown RBP7.02□□□□□ -1.29
CDH13-212ENST00000569144 HIF1AQ16665 826 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 DUSP28Q4G0W2 176 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 FAM47CQ5HY64 1035 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 TMEM63BQ5T3F8 832 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 SLC9C2Q5TAH2 1124 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 C12orf60Q5U649 245 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 NFRKBQ6P4R8 1299 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 CNKSR3Q6P9H4 555 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 CAPN12Q6ZSI9 719 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 KIAA1211Q6ZU35 1233 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 ERMP1Q7Z2K6 904 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 FBXO16Q8IX29 292 aaPredicted RBP7.02□□□□□ -1.29
CDH13-212ENST00000569144 AMOTL1Q8IY63 956 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 CAGE1Q8TC20 777 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 SSH3Q8TE77 659 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 AFAP1L1Q8TED9 768 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 ARHGAP45Q92619 1136 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 EDAQ92838 391 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 EAF2Q96CJ1 260 aaPredicted RBP7.02□□□□□ -1.29
CDH13-212ENST00000569144 CRBNQ96SW2 442 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 IRF2BPLQ9H1B7 796 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 A1CFQ9NQ94 594 aaKnown RBP7.02□□□□□ -1.29
CDH13-212ENST00000569144 KLK14Q9P0G3 267 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 NYAP2Q9P242 653 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 MUTYHQ9UIF7 546 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 FEM1BQ9UK73 627 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 CACNA1AO00555 2505 aa7.02□□□□□ -1.29
CDH13-212ENST00000569144 SCN5AQ14524 2016 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 CFAP54Q96N23 3096 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 ABHD14A-ACY1A0A1B0GW23 586 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 TCRBV5S4A2TA0A5A2 114 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 TMEM221A6NGB7 291 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 M0R296 226 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 EFCAB14O75071 495 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 SURF6O75683 361 aaKnown RBP7.01□□□□□ -1.29
CDH13-212ENST00000569144 CXCL10P02778 98 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 MYL3P08590 195 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 BMP4P12644 408 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 CD33P20138 364 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 LORP23490 312 aaPredicted RBP7.01□□□□□ -1.29
CDH13-212ENST00000569144 GPNMBQ14956 572 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 TKFCQ3LXA3 575 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 BRDTQ58F21 947 aaPredicted RBP7.01□□□□□ -1.29
CDH13-212ENST00000569144 TCEAL5Q5H9L2 206 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 EEPD1Q7L9B9 569 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 SUGP1Q8IWZ8 645 aaKnown RBP7.01□□□□□ -1.29
CDH13-212ENST00000569144 MORC4Q8TE76 937 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 CEP63Q96MT8 703 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 SAMD11Q96NU1 681 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 C17orf80Q9BSJ5 609 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 ARMT1Q9H993 441 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 ALG13Q9NP73 1137 aaKnown RBP7.01□□□□□ -1.29
CDH13-212ENST00000569144 HOMER2Q9NSB8 354 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 RNF146Q9NTX7 359 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 FAM86C1Q9NVL1 165 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 HCN2Q9UL51 889 aa7.01□□□□□ -1.29
CDH13-212ENST00000569144 NOP58Q9Y2X3 529 aaKnown RBP7.01□□□□□ -1.29
CDH13-212ENST00000569144 PTPRSQ13332 1948 aa7□□□□□ -1.29
CDH13-212ENST00000569144 SIP14410 1827 aa7□□□□□ -1.29
CDH13-212ENST00000569144 CYP2D7A0A087X1C5 515 aa7□□□□□ -1.29
CDH13-212ENST00000569144 PROB1E7EW31 1015 aa7□□□□□ -1.29
CDH13-212ENST00000569144 C2CD2LO14523 706 aa7□□□□□ -1.29
CDH13-212ENST00000569144 EFSO43281 561 aa7□□□□□ -1.29
CDH13-212ENST00000569144 MBTPS2O43462 519 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms