RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 ETV3P41162 512 aa9.64□□□□□ -0.87
CDH11-216ENST00000569128 SLC7A5Q01650 507 aa9.64□□□□□ -0.87
CDH11-216ENST00000569128 MTERF2Q49AM1 385 aa9.64□□□□□ -0.87
CDH11-216ENST00000569128 GORABQ5T7V8 394 aa9.64□□□□□ -0.87
CDH11-216ENST00000569128 KIAA1211LQ6NV74 962 aa9.64□□□□□ -0.87
CDH11-216ENST00000569128 ATG9AQ7Z3C6 839 aa9.64□□□□□ -0.87
CDH11-216ENST00000569128 C16orf71Q8IYS4 520 aaPredicted RBP9.64□□□□□ -0.87
CDH11-216ENST00000569128 JDP2Q8WYK2 163 aa9.64□□□□□ -0.87
CDH11-216ENST00000569128 KLHL6Q8WZ60 621 aa9.64□□□□□ -0.87
CDH11-216ENST00000569128 FAM170BA6NMN3 283 aa9.63□□□□□ -0.87
CDH11-216ENST00000569128 EYA2O00167 538 aa9.63□□□□□ -0.87
CDH11-216ENST00000569128 NUCB1Q02818 461 aa9.63□□□□□ -0.87
CDH11-216ENST00000569128 G3BP1Q13283 466 aaKnown RBP eCLIP9.63□□□□□ -0.87
CDH11-216ENST00000569128 OS9Q13438 667 aaPredicted RBP9.63□□□□□ -0.87
CDH11-216ENST00000569128 NCAPHQ15003 741 aa9.63□□□□□ -0.87
CDH11-216ENST00000569128 TCEA2Q15560 299 aa9.63□□□□□ -0.87
CDH11-216ENST00000569128 TKFCQ3LXA3 575 aa9.63□□□□□ -0.87
CDH11-216ENST00000569128 CRY2Q49AN0 593 aa9.63□□□□□ -0.87
CDH11-216ENST00000569128 ODR4Q5SWX8 454 aa9.63□□□□□ -0.87
CDH11-216ENST00000569128 RNF43Q68DV7 783 aa9.63□□□□□ -0.87
CDH11-216ENST00000569128 MRM1Q6IN84 353 aaKnown RBP9.63□□□□□ -0.87
CDH11-216ENST00000569128 OGFOD3Q6PK18 319 aa9.63□□□□□ -0.87
CDH11-216ENST00000569128 KRT26Q7Z3Y9 468 aa9.63□□□□□ -0.87
CDH11-216ENST00000569128 C2CD5Q86YS7 1000 aa9.63□□□□□ -0.87
CDH11-216ENST00000569128 PRPF38AQ8NAV1 312 aaKnown RBP9.63□□□□□ -0.87
CDH11-216ENST00000569128 GCC1Q96CN9 775 aa9.63□□□□□ -0.87
CDH11-216ENST00000569128 IL1RAPL2Q9NP60 686 aa9.63□□□□□ -0.87
CDH11-216ENST00000569128 RIC1Q4ADV7 1423 aa9.63□□□□□ -0.87
CDH11-216ENST00000569128 RTL9Q8NET4 1388 aa9.63□□□□□ -0.87
CDH11-216ENST00000569128 WTIPA6NIX2 430 aaPredicted RBP9.62□□□□□ -0.87
CDH11-216ENST00000569128 SNAP23O00161 211 aa9.62□□□□□ -0.87
CDH11-216ENST00000569128 SRGNP10124 158 aa9.62□□□□□ -0.87
CDH11-216ENST00000569128 POLD1P28340 1107 aa9.62□□□□□ -0.87
CDH11-216ENST00000569128 RPS8P62241 208 aaKnown RBP9.62□□□□□ -0.87
CDH11-216ENST00000569128 TFCP2Q12800 502 aa9.62□□□□□ -0.87
CDH11-216ENST00000569128 BBS9Q3SYG4 887 aa9.62□□□□□ -0.87
CDH11-216ENST00000569128 NBPF12Q5TAG4 269 aaPredicted RBP9.62□□□□□ -0.87
CDH11-216ENST00000569128 LDHAL6AQ6ZMR3 332 aa9.62□□□□□ -0.87
CDH11-216ENST00000569128 DDX46Q7L014 1031 aaKnown RBP9.62□□□□□ -0.87
CDH11-216ENST00000569128 ZNF765Q7L2R6 523 aa9.62□□□□□ -0.87
CDH11-216ENST00000569128 FERMT3Q86UX7 667 aa9.62□□□□□ -0.87
CDH11-216ENST00000569128 OTUD7AQ8TE49 926 aaPredicted RBP9.62□□□□□ -0.87
CDH11-216ENST00000569128 RPGRQ92834 1020 aaKnown RBP9.62□□□□□ -0.87
CDH11-216ENST00000569128 ZNF622Q969S3 477 aaKnown RBP eCLIP9.62□□□□□ -0.87
CDH11-216ENST00000569128 CEP89Q96ST8 783 aa9.62□□□□□ -0.87
CDH11-216ENST00000569128 PLAAQ9Y263 795 aa9.62□□□□□ -0.87
CDH11-216ENST00000569128 A0A0G2JLW4 131 aa9.61□□□□□ -0.87
CDH11-216ENST00000569128 TAF5LO75529 589 aa9.61□□□□□ -0.87
CDH11-216ENST00000569128 PROCP04070 461 aa9.61□□□□□ -0.87
CDH11-216ENST00000569128 F13BP05160 661 aa9.61□□□□□ -0.87
CDH11-216ENST00000569128 DPEP1P16444 411 aa9.61□□□□□ -0.87
CDH11-216ENST00000569128 HOXA10P31260 410 aaPredicted RBP9.61□□□□□ -0.87
CDH11-216ENST00000569128 PDE6BP35913 854 aa9.61□□□□□ -0.87
CDH11-216ENST00000569128 NFIAQ12857 509 aa9.61□□□□□ -0.87
CDH11-216ENST00000569128 GRAPQ13588 217 aa9.61□□□□□ -0.87
CDH11-216ENST00000569128 AXDND1Q5T1B0 1012 aaPredicted RBP9.61□□□□□ -0.87
CDH11-216ENST00000569128 OLFM4Q6UX06 510 aa9.61□□□□□ -0.87
CDH11-216ENST00000569128 CHD1LQ86WJ1 897 aa9.61□□□□□ -0.87
CDH11-216ENST00000569128 ANKRD18AQ8IVF6 992 aa9.61□□□□□ -0.87
CDH11-216ENST00000569128 FMNL3Q8IVF7 1028 aa9.61□□□□□ -0.87
CDH11-216ENST00000569128 CCDC144CPQ8IYA2 1237 aa9.61□□□□□ -0.87
CDH11-216ENST00000569128 EXOC8Q8IYI6 725 aa9.61□□□□□ -0.87
CDH11-216ENST00000569128 GRAPLQ8TC17 118 aaPredicted RBP9.61□□□□□ -0.87
CDH11-216ENST00000569128 RBM17Q96I25 401 aaKnown RBP9.61□□□□□ -0.87
CDH11-216ENST00000569128 SPOCK3Q9BQ16 436 aa9.61□□□□□ -0.87
CDH11-216ENST00000569128 LRRCC1Q9C099 1032 aa9.61□□□□□ -0.87
CDH11-216ENST00000569128 MKRN2Q9H000 416 aaKnown RBP9.61□□□□□ -0.87
CDH11-216ENST00000569128 PRDM5Q9NQX1 630 aaPredicted RBP9.61□□□□□ -0.87
CDH11-216ENST00000569128 CNNM1Q9NRU3 951 aa9.61□□□□□ -0.87
CDH11-216ENST00000569128 HOMER2Q9NSB8 354 aa9.61□□□□□ -0.87
CDH11-216ENST00000569128 C10orf71Q711Q0 1435 aa9.61□□□□□ -0.87
CDH11-216ENST00000569128 COL11A2P13942 1736 aaPredicted RBP9.61□□□□□ -0.87
CDH11-216ENST00000569128 SPEF2Q9C093 1822 aa9.61□□□□□ -0.87
CDH11-216ENST00000569128 H0YIN7 160 aa9.6□□□□□ -0.87
CDH11-216ENST00000569128 CIAO1O76071 339 aa9.6□□□□□ -0.87
CDH11-216ENST00000569128 NPR1P16066 1061 aa9.6□□□□□ -0.87
CDH11-216ENST00000569128 KCNA3P22001 575 aa9.6□□□□□ -0.87
CDH11-216ENST00000569128 CYP7A1P22680 504 aa9.6□□□□□ -0.87
CDH11-216ENST00000569128 IGHMBP2P38935 993 aaKnown RBP9.6□□□□□ -0.87
CDH11-216ENST00000569128 IL15P40933 162 aaPredicted RBP9.6□□□□□ -0.87
CDH11-216ENST00000569128 RGS3P49796 1198 aa9.6□□□□□ -0.87
CDH11-216ENST00000569128 RNF4P78317 190 aa9.6□□□□□ -0.87
CDH11-216ENST00000569128 CYP27C1Q4G0S4 372 aa9.6□□□□□ -0.87
CDH11-216ENST00000569128 METTL24Q5JXM2 366 aa9.6□□□□□ -0.87
CDH11-216ENST00000569128 DCAF15Q66K64 600 aa9.6□□□□□ -0.87
CDH11-216ENST00000569128 FAM214BQ7L5A3 538 aa9.6□□□□□ -0.87
CDH11-216ENST00000569128 RNF141Q8WVD5 230 aa9.6□□□□□ -0.87
CDH11-216ENST00000569128 ZNF669Q96BR6 464 aaPredicted RBP9.6□□□□□ -0.87
CDH11-216ENST00000569128 EAF2Q96CJ1 260 aaPredicted RBP9.6□□□□□ -0.87
CDH11-216ENST00000569128 VWCEQ96DN2 955 aa9.6□□□□□ -0.87
CDH11-216ENST00000569128 KIF1BPQ96EK5 621 aa9.6□□□□□ -0.87
CDH11-216ENST00000569128 MASTLQ96GX5 879 aa9.6□□□□□ -0.87
CDH11-216ENST00000569128 HEXIM2Q96MH2 286 aaKnown RBP9.6□□□□□ -0.87
CDH11-216ENST00000569128 CRAMP1Q96RY5 1269 aa9.6□□□□□ -0.87
CDH11-216ENST00000569128 CDC5LQ99459 802 aaKnown RBP9.6□□□□□ -0.87
CDH11-216ENST00000569128 MPHOSPH8Q99549 860 aa9.6□□□□□ -0.87
CDH11-216ENST00000569128 IER2Q9BTL4 223 aa9.6□□□□□ -0.87
CDH11-216ENST00000569128 CCDC8Q9H0W5 538 aaPredicted RBP9.6□□□□□ -0.87
CDH11-216ENST00000569128 SPON1Q9HCB6 807 aa9.6□□□□□ -0.87
CDH11-216ENST00000569128 MINPP1Q9UNW1 487 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms