RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 KCNQ1P51787 676 aa20.81■□□□□ 0.92
SYNGR3-205ENST00000568896 DHX38Q92620 1227 aaKnown RBP20.81■□□□□ 0.92
SYNGR3-205ENST00000568896 TMX3Q96JJ7 454 aa20.81■□□□□ 0.92
SYNGR3-205ENST00000568896 TELO2Q9Y4R8 837 aa20.81■□□□□ 0.92
SYNGR3-205ENST00000568896 NOP56O00567 594 aaKnown RBP20.8■□□□□ 0.92
SYNGR3-205ENST00000568896 EDIL3O43854 480 aa20.8■□□□□ 0.92
SYNGR3-205ENST00000568896 PPFIA4O75335 1185 aa20.8■□□□□ 0.92
SYNGR3-205ENST00000568896 F2P00734 622 aa20.8■□□□□ 0.92
SYNGR3-205ENST00000568896 ZNF286BP0CG31 522 aa20.8■□□□□ 0.92
SYNGR3-205ENST00000568896 POU3F3P20264 500 aaPredicted RBP20.8■□□□□ 0.92
SYNGR3-205ENST00000568896 CIITAP33076 1130 aa20.8■□□□□ 0.92
SYNGR3-205ENST00000568896 MCM2P49736 904 aa20.8■□□□□ 0.92
SYNGR3-205ENST00000568896 FOSBP53539 338 aa20.8■□□□□ 0.92
SYNGR3-205ENST00000568896 TCTN1Q2MV58 587 aa20.8■□□□□ 0.92
SYNGR3-205ENST00000568896 KRT25Q7Z3Z0 450 aa20.8■□□□□ 0.92
SYNGR3-205ENST00000568896 SESTD1Q86VW0 696 aa20.8■□□□□ 0.92
SYNGR3-205ENST00000568896 PLA2G4DQ86XP0 818 aa20.8■□□□□ 0.92
SYNGR3-205ENST00000568896 OXER1Q8TDS5 423 aa20.8■□□□□ 0.92
SYNGR3-205ENST00000568896 TBCKQ8TEA7 893 aa20.8■□□□□ 0.92
SYNGR3-205ENST00000568896 GPR20Q99678 358 aa20.8■□□□□ 0.92
SYNGR3-205ENST00000568896 AGO4Q9HCK5 861 aaKnown RBP20.8■□□□□ 0.92
SYNGR3-205ENST00000568896 TRANK1O15050 2925 aa20.8■□□□□ 0.92
SYNGR3-205ENST00000568896 MYH7BA7E2Y1 1941 aa20.79■□□□□ 0.92
SYNGR3-205ENST00000568896 KIF28PB7ZC32 967 aa20.79■□□□□ 0.92
SYNGR3-205ENST00000568896 GTPBP6O43824 516 aaPredicted RBP20.79■□□□□ 0.92
SYNGR3-205ENST00000568896 HMGN5P82970 282 aaKnown RBP20.79■□□□□ 0.92
SYNGR3-205ENST00000568896 SP4Q02446 784 aa20.79■□□□□ 0.92
SYNGR3-205ENST00000568896 CAGE1Q8TC20 777 aa20.79■□□□□ 0.92
SYNGR3-205ENST00000568896 AFAP1L1Q8TED9 768 aa20.79■□□□□ 0.92
SYNGR3-205ENST00000568896 HDAC6Q9UBN7 1215 aa20.79■□□□□ 0.92
SYNGR3-205ENST00000568896 PRRC2BQ5JSZ5 2229 aaKnown RBP20.79■□□□□ 0.92
SYNGR3-205ENST00000568896 DOCK5Q9H7D0 1870 aa20.79■□□□□ 0.92
SYNGR3-205ENST00000568896 TET1Q8NFU7 2136 aa20.78■□□□□ 0.92
SYNGR3-205ENST00000568896 LCHNA4D1U4 455 aa20.78■□□□□ 0.92
SYNGR3-205ENST00000568896 TLL1O43897 1013 aa20.78■□□□□ 0.92
SYNGR3-205ENST00000568896 SELPP16109 830 aa20.78■□□□□ 0.92
SYNGR3-205ENST00000568896 USP11P51784 963 aa20.78■□□□□ 0.92
SYNGR3-205ENST00000568896 SETQ01105 290 aaPredicted RBP20.78■□□□□ 0.92
SYNGR3-205ENST00000568896 ITGB3BPQ13352 177 aaPredicted RBP20.78■□□□□ 0.92
SYNGR3-205ENST00000568896 NONOQ15233 471 aaKnown RBP eCLIP20.78■□□□□ 0.92
SYNGR3-205ENST00000568896 LRRC8DQ7L1W4 858 aa20.78■□□□□ 0.92
SYNGR3-205ENST00000568896 BDP1A6H8Y1 2624 aa20.78■□□□□ 0.92
SYNGR3-205ENST00000568896 NFASCO94856 1347 aa20.78■□□□□ 0.92
SYNGR3-205ENST00000568896 CCDC194A0A1B0GVG4 234 aa20.77■□□□□ 0.92
SYNGR3-205ENST00000568896 NBNO60934 754 aa20.77■□□□□ 0.92
SYNGR3-205ENST00000568896 BAIAP3O94812 1187 aa20.77■□□□□ 0.92
SYNGR3-205ENST00000568896 MMP1P03956 469 aa20.77■□□□□ 0.92
SYNGR3-205ENST00000568896 LGALS2P05162 132 aa20.77■□□□□ 0.92
SYNGR3-205ENST00000568896 KRT2P35908 639 aa20.77■□□□□ 0.92
SYNGR3-205ENST00000568896 KCNJ6P48051 423 aa20.77■□□□□ 0.92
SYNGR3-205ENST00000568896 PSEN2P49810 448 aa20.77■□□□□ 0.92
SYNGR3-205ENST00000568896 WDR5P61964 334 aaKnown RBP20.77■□□□□ 0.92
SYNGR3-205ENST00000568896 DEFB103AP81534 67 aa20.77■□□□□ 0.92
SYNGR3-205ENST00000568896 GRB10Q13322 594 aa20.77■□□□□ 0.92
SYNGR3-205ENST00000568896 TRIM29Q14134 588 aa20.77■□□□□ 0.92
SYNGR3-205ENST00000568896 PRR16Q569H4 304 aa20.77■□□□□ 0.92
SYNGR3-205ENST00000568896 CCDC155Q8N6L0 562 aa20.77■□□□□ 0.92
SYNGR3-205ENST00000568896 LENG9Q96B70 501 aa20.77■□□□□ 0.92
SYNGR3-205ENST00000568896 C16orf70Q9BSU1 422 aa20.77■□□□□ 0.92
SYNGR3-205ENST00000568896 KATNAL1Q9BW62 490 aa20.77■□□□□ 0.92
SYNGR3-205ENST00000568896 BRMS1Q9HCU9 246 aa20.77■□□□□ 0.92
SYNGR3-205ENST00000568896 JPH1Q9HDC5 661 aaPredicted RBP20.77■□□□□ 0.92
SYNGR3-205ENST00000568896 GTF2IRD1Q9UHL9 959 aa20.77■□□□□ 0.92
SYNGR3-205ENST00000568896 HAS3O00219 553 aa20.76■□□□□ 0.91
SYNGR3-205ENST00000568896 LPXNO60711 386 aa20.76■□□□□ 0.91
SYNGR3-205ENST00000568896 CKBP12277 381 aa20.76■□□□□ 0.91
SYNGR3-205ENST00000568896 ZNF200P98182 395 aaPredicted RBP20.76■□□□□ 0.91
SYNGR3-205ENST00000568896 NR5A1Q13285 461 aa20.76■□□□□ 0.91
SYNGR3-205ENST00000568896 MFSD10Q14728 455 aa20.76■□□□□ 0.91
SYNGR3-205ENST00000568896 INF2Q27J81 1249 aa20.76■□□□□ 0.91
SYNGR3-205ENST00000568896 C7orf31Q8N865 590 aa20.76■□□□□ 0.91
SYNGR3-205ENST00000568896 TNFRSF25Q93038 417 aa20.76■□□□□ 0.91
SYNGR3-205ENST00000568896 WNT8BQ93098 351 aa20.76■□□□□ 0.91
SYNGR3-205ENST00000568896 SDF4Q9BRK5 362 aa20.76■□□□□ 0.91
SYNGR3-205ENST00000568896 SLC9A2Q9UBY0 812 aa20.76■□□□□ 0.91
SYNGR3-205ENST00000568896 TCF20Q9UGU0 1960 aaKnown RBP20.76■□□□□ 0.91
SYNGR3-205ENST00000568896 NCOR1O75376 2440 aa20.75■□□□□ 0.91
SYNGR3-205ENST00000568896 GSTTP1A0A1W2PQM5 241 aa20.75■□□□□ 0.91
SYNGR3-205ENST00000568896 IPO5O00410 1097 aaKnown RBP20.75■□□□□ 0.91
SYNGR3-205ENST00000568896 TDP2O95551 362 aa20.75■□□□□ 0.91
SYNGR3-205ENST00000568896 TCF7P36402 384 aaPredicted RBP20.75■□□□□ 0.91
SYNGR3-205ENST00000568896 GUCY1B3Q02153 619 aa20.75■□□□□ 0.91
SYNGR3-205ENST00000568896 HIC1Q14526 733 aa20.75■□□□□ 0.91
SYNGR3-205ENST00000568896 KIAA0753Q2KHM9 967 aa20.75■□□□□ 0.91
SYNGR3-205ENST00000568896 EARS2Q5JPH6 523 aaKnown RBP20.75■□□□□ 0.91
SYNGR3-205ENST00000568896 PIK3AP1Q6ZUJ8 805 aa20.75■□□□□ 0.91
SYNGR3-205ENST00000568896 TRIM50Q86XT4 487 aa20.75■□□□□ 0.91
SYNGR3-205ENST00000568896 DIS3L2Q8IYB7 885 aaKnown RBP20.75■□□□□ 0.91
SYNGR3-205ENST00000568896 FAM184AQ8NB25 1140 aa20.75■□□□□ 0.91
SYNGR3-205ENST00000568896 SEPT1Q8WYJ6 367 aa20.75■□□□□ 0.91
SYNGR3-205ENST00000568896 C8orf76Q96K31 380 aa20.75■□□□□ 0.91
SYNGR3-205ENST00000568896 UIMC1Q96RL1 719 aa20.75■□□□□ 0.91
SYNGR3-205ENST00000568896 ZNF577Q9BSK1 485 aa20.75■□□□□ 0.91
SYNGR3-205ENST00000568896 FAM205CA6NFA0 338 aa20.74■□□□□ 0.91
SYNGR3-205ENST00000568896 H3BRB1 525 aa20.74■□□□□ 0.91
SYNGR3-205ENST00000568896 CXCL10P02778 98 aa20.74■□□□□ 0.91
SYNGR3-205ENST00000568896 AAK1Q2M2I8 961 aa20.74■□□□□ 0.91
SYNGR3-205ENST00000568896 TRIM71Q2Q1W2 868 aaKnown RBP20.74■□□□□ 0.91
SYNGR3-205ENST00000568896 UTP14CQ5TAP6 766 aaKnown RBP20.74■□□□□ 0.91
SYNGR3-205ENST00000568896 CNKSR3Q6P9H4 555 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms