RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 SAMM50Q9Y512 469 aa14.71□□□□□ -0.05
CNOT1-213ENST00000568158 BACH1O14867 736 aa14.7□□□□□ -0.06
CNOT1-213ENST00000568158 CHMP2AO43633 222 aa14.7□□□□□ -0.06
CNOT1-213ENST00000568158 CSF2RAP15509 400 aa14.7□□□□□ -0.06
CNOT1-213ENST00000568158 GCFC2P16383 781 aaKnown RBP14.7□□□□□ -0.06
CNOT1-213ENST00000568158 ATP4AP20648 1035 aa14.7□□□□□ -0.06
CNOT1-213ENST00000568158 KRT76Q01546 638 aa14.7□□□□□ -0.06
CNOT1-213ENST00000568158 PLCB4Q15147 1175 aa14.7□□□□□ -0.06
CNOT1-213ENST00000568158 LARP1BQ659C4 914 aaKnown RBP14.7□□□□□ -0.06
CNOT1-213ENST00000568158 MIS18BP1Q6P0N0 1132 aa14.7□□□□□ -0.06
CNOT1-213ENST00000568158 PLPPR4Q7Z2D5 763 aa14.7□□□□□ -0.06
CNOT1-213ENST00000568158 TRMT1LQ7Z2T5 733 aaKnown RBP14.7□□□□□ -0.06
CNOT1-213ENST00000568158 CCDC60Q8IWA6 550 aaPredicted RBP14.7□□□□□ -0.06
CNOT1-213ENST00000568158 HAS1Q92839 578 aa14.7□□□□□ -0.06
CNOT1-213ENST00000568158 ATP6V0A1Q93050 837 aa14.7□□□□□ -0.06
CNOT1-213ENST00000568158 WNT8BQ93098 351 aa14.7□□□□□ -0.06
CNOT1-213ENST00000568158 WNT8AQ9H1J5 351 aa14.7□□□□□ -0.06
CNOT1-213ENST00000568158 ZNF302Q9NR11 478 aa14.7□□□□□ -0.06
CNOT1-213ENST00000568158 DISC1Q9NRI5 854 aa14.7□□□□□ -0.06
CNOT1-213ENST00000568158 PCDHA10Q9Y5I2 948 aa14.7□□□□□ -0.06
CNOT1-213ENST00000568158 LTBP2Q14767 1821 aa14.7□□□□□ -0.06
CNOT1-213ENST00000568158 EMSYQ7Z589 1322 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 MARCH6O60337 910 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 PSAPP07602 524 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 ACRP10323 421 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 INSRRP14616 1297 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 HOXC8P31273 242 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 IGBP1P78318 339 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 ADAM17P78536 824 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 FPGSQ05932 587 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 GNL2Q13823 731 aaKnown RBP14.69□□□□□ -0.06
CNOT1-213ENST00000568158 SHHQ15465 462 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 ZNF174Q15697 407 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 FAM160B1Q5W0V3 765 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 MCTP1Q6DN14 999 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 PDXDC2PQ6P474 469 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 B3GNT9Q6UX72 402 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 C16orf59Q7L2K0 433 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 TMEM199Q8N511 208 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 RETREG2Q8NC44 543 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 SNX21Q969T3 373 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 ZBTB10Q96DT7 871 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 FAM20AQ96MK3 541 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 NAP1L4Q99733 375 aaKnown RBP14.69□□□□□ -0.06
CNOT1-213ENST00000568158 KCNMB3Q9NPA1 279 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 GABBR1Q9UBS5 961 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 TCEAL9Q9UHQ7 104 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 KIF3AQ9Y496 699 aa14.69□□□□□ -0.06
CNOT1-213ENST00000568158 MYH9P35579 1960 aaKnown RBP14.68□□□□□ -0.06
CNOT1-213ENST00000568158 K7ELQ4 463 aaPredicted RBP14.68□□□□□ -0.06
CNOT1-213ENST00000568158 EML1O00423 815 aa14.68□□□□□ -0.06
CNOT1-213ENST00000568158 GNAT1P11488 350 aa14.68□□□□□ -0.06
CNOT1-213ENST00000568158 U2AF2P26368 475 aaKnown RBP eCLIP14.68□□□□□ -0.06
CNOT1-213ENST00000568158 FXR2P51116 673 aaKnown RBP eCLIP14.68□□□□□ -0.068e-15■□□□□ 10.9
CNOT1-213ENST00000568158 PPFIA1Q13136 1202 aa14.68□□□□□ -0.06
CNOT1-213ENST00000568158 PTK7Q13308 1070 aa14.68□□□□□ -0.06
CNOT1-213ENST00000568158 BFSP2Q13515 415 aa14.68□□□□□ -0.06
CNOT1-213ENST00000568158 GRIK4Q16099 956 aa14.68□□□□□ -0.06
CNOT1-213ENST00000568158 TRIM71Q2Q1W2 868 aaKnown RBP14.68□□□□□ -0.06
CNOT1-213ENST00000568158 HABP4Q5JVS0 413 aaKnown RBP14.68□□□□□ -0.06
CNOT1-213ENST00000568158 C9orf50Q5SZB4 431 aa14.68□□□□□ -0.06
CNOT1-213ENST00000568158 MIER3Q7Z3K6 550 aa14.68□□□□□ -0.06
CNOT1-213ENST00000568158 NOSTRINQ8IVI9 506 aa14.68□□□□□ -0.06
CNOT1-213ENST00000568158 SMAP1Q8IYB5 467 aaPredicted RBP14.68□□□□□ -0.06
CNOT1-213ENST00000568158 AFAP1L1Q8TED9 768 aa14.68□□□□□ -0.06
CNOT1-213ENST00000568158 LMBR1Q8WVP7 490 aa14.68□□□□□ -0.06
CNOT1-213ENST00000568158 TRAPPC12Q8WVT3 735 aa14.68□□□□□ -0.06
CNOT1-213ENST00000568158 TMEM60Q9H2L4 133 aa14.68□□□□□ -0.06
CNOT1-213ENST00000568158 MAFBQ9Y5Q3 323 aaPredicted RBP14.68□□□□□ -0.06
CNOT1-213ENST00000568158 WDR81Q562E7 1941 aa14.68□□□□□ -0.06
CNOT1-213ENST00000568158 NRCAMQ92823 1304 aa14.67□□□□□ -0.06
CNOT1-213ENST00000568158 POTEB3A0JP26 581 aa14.67□□□□□ -0.06
CNOT1-213ENST00000568158 WDR64B1ANS9 1081 aa14.67□□□□□ -0.06
CNOT1-213ENST00000568158 H3BQV1 296 aa14.67□□□□□ -0.06
CNOT1-213ENST00000568158 TBX3O15119 743 aa14.67□□□□□ -0.06
CNOT1-213ENST00000568158 BAG4O95429 457 aaKnown RBP14.67□□□□□ -0.06
CNOT1-213ENST00000568158 IQCF3P0C7M6 154 aa14.67□□□□□ -0.06
CNOT1-213ENST00000568158 CKBP12277 381 aa14.67□□□□□ -0.06
CNOT1-213ENST00000568158 MCM7P33993 719 aa14.67□□□□□ -0.06
CNOT1-213ENST00000568158 TOB1P50616 345 aaPredicted RBP14.67□□□□□ -0.06
CNOT1-213ENST00000568158 NBR1Q14596 966 aa14.67□□□□□ -0.06
CNOT1-213ENST00000568158 MARCH8Q5T0T0 291 aa14.67□□□□□ -0.06
CNOT1-213ENST00000568158 POTEBQ6S5H4 581 aa14.67□□□□□ -0.06
CNOT1-213ENST00000568158 SERINC5Q86VE9 423 aa14.67□□□□□ -0.06
CNOT1-213ENST00000568158 CKAP2LQ8IYA6 745 aa14.67□□□□□ -0.06
CNOT1-213ENST00000568158 VWCEQ96DN2 955 aa14.67□□□□□ -0.06
CNOT1-213ENST00000568158 TRPC6Q9Y210 931 aa14.67□□□□□ -0.06
CNOT1-213ENST00000568158 SCN5AQ14524 2016 aa14.66□□□□□ -0.06
CNOT1-213ENST00000568158 RRN3P2A6NIE6 340 aa14.66□□□□□ -0.06
CNOT1-213ENST00000568158 ZNF862O60290 1169 aa14.66□□□□□ -0.06
CNOT1-213ENST00000568158 HBP1O60381 514 aa14.66□□□□□ -0.06
CNOT1-213ENST00000568158 SFNP31947 248 aa14.66□□□□□ -0.06
CNOT1-213ENST00000568158 TXKP42681 527 aa14.66□□□□□ -0.06
CNOT1-213ENST00000568158 JAK3P52333 1124 aa14.66□□□□□ -0.06
CNOT1-213ENST00000568158 PPIGQ13427 754 aaKnown RBP eCLIP14.66□□□□□ -0.06
CNOT1-213ENST00000568158 GPNMBQ14956 572 aa14.66□□□□□ -0.06
CNOT1-213ENST00000568158 CALCRLQ16602 461 aa14.66□□□□□ -0.06
CNOT1-213ENST00000568158 UGCGQ16739 394 aa14.66□□□□□ -0.06
CNOT1-213ENST00000568158 TMEM240Q5SV17 173 aa14.66□□□□□ -0.06
CNOT1-213ENST00000568158 ZNF618Q5T7W0 954 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms