RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 RTEL1Q9NZ71 1219 aa12.53□□□□□ -0.4
LINC01228-201ENST00000567966 TANC1Q9C0D5 1861 aa12.53□□□□□ -0.4
LINC01228-201ENST00000567966 ADAMTS3O15072 1205 aa12.52□□□□□ -0.41
LINC01228-201ENST00000567966 PPFIA4O75335 1185 aa12.52□□□□□ -0.41
LINC01228-201ENST00000567966 MYOGP15173 224 aa12.52□□□□□ -0.41
LINC01228-201ENST00000567966 GNL2Q13823 731 aaKnown RBP12.52□□□□□ -0.41
LINC01228-201ENST00000567966 Q4G0T1 1027 aa12.52□□□□□ -0.41
LINC01228-201ENST00000567966 CELF3Q5SZQ8 465 aaKnown RBP12.52□□□□□ -0.41
LINC01228-201ENST00000567966 GDF6Q6KF10 455 aaPredicted RBP12.52□□□□□ -0.41
LINC01228-201ENST00000567966 NFRKBQ6P4R8 1299 aa12.52□□□□□ -0.41
LINC01228-201ENST00000567966 NEK8Q86SG6 692 aa12.52□□□□□ -0.41
LINC01228-201ENST00000567966 NOSTRINQ8IVI9 506 aa12.52□□□□□ -0.41
LINC01228-201ENST00000567966 RASGRP4Q8TDF6 673 aa12.52□□□□□ -0.41
LINC01228-201ENST00000567966 OXER1Q8TDS5 423 aa12.52□□□□□ -0.41
LINC01228-201ENST00000567966 COL25A1Q9BXS0 654 aaPredicted RBP12.52□□□□□ -0.41
LINC01228-201ENST00000567966 PRDM12Q9H4Q4 367 aa12.52□□□□□ -0.41
LINC01228-201ENST00000567966 KCNH7Q9NS40 1196 aa12.52□□□□□ -0.41
LINC01228-201ENST00000567966 TBC1D22BQ9NU19 505 aa12.52□□□□□ -0.41
LINC01228-201ENST00000567966 PRUNE2Q8WUY3 3088 aa12.52□□□□□ -0.41
LINC01228-201ENST00000567966 TRIP12Q14669 1992 aaPredicted RBP12.52□□□□□ -0.41
LINC01228-201ENST00000567966 IGLV3-22A0A075B6J6 115 aa12.51□□□□□ -0.41
LINC01228-201ENST00000567966 ZBBXA8MT70 800 aa12.51□□□□□ -0.41
LINC01228-201ENST00000567966 FAM86B1E9PN63 330 aa12.51□□□□□ -0.41
LINC01228-201ENST00000567966 TBX3O15119 743 aa12.51□□□□□ -0.41
LINC01228-201ENST00000567966 DTNBO60941 627 aa12.51□□□□□ -0.41
LINC01228-201ENST00000567966 FAM86B2P0C5J1 330 aa12.51□□□□□ -0.41
LINC01228-201ENST00000567966 IQCF3P0C7M6 154 aa12.51□□□□□ -0.41
LINC01228-201ENST00000567966 SP2Q02086 613 aa12.51□□□□□ -0.41
LINC01228-201ENST00000567966 NR5A1Q13285 461 aa12.51□□□□□ -0.41
LINC01228-201ENST00000567966 MYSM1Q5VVJ2 828 aa12.51□□□□□ -0.41
LINC01228-201ENST00000567966 METTL7BQ6UX53 244 aa12.51□□□□□ -0.41
LINC01228-201ENST00000567966 PIK3AP1Q6ZUJ8 805 aa12.51□□□□□ -0.41
LINC01228-201ENST00000567966 DHX37Q8IY37 1157 aaKnown RBP12.51□□□□□ -0.41
LINC01228-201ENST00000567966 RPUSD2Q8IZ73 545 aaKnown RBP12.51□□□□□ -0.41
LINC01228-201ENST00000567966 SPRYD3Q8NCJ5 442 aa12.51□□□□□ -0.41
LINC01228-201ENST00000567966 DHX38Q92620 1227 aaKnown RBP12.51□□□□□ -0.41
LINC01228-201ENST00000567966 PGBD1Q96JS3 809 aa12.51□□□□□ -0.41
LINC01228-201ENST00000567966 FAM20AQ96MK3 541 aa12.51□□□□□ -0.41
LINC01228-201ENST00000567966 RIT2Q99578 217 aa12.51□□□□□ -0.41
LINC01228-201ENST00000567966 BCAS3Q9H6U6 928 aa12.51□□□□□ -0.41
LINC01228-201ENST00000567966 NFASCO94856 1347 aa12.51□□□□□ -0.41
LINC01228-201ENST00000567966 A0A0C4DFX4 3053 aa12.51□□□□□ -0.41
LINC01228-201ENST00000567966 DOCK5Q9H7D0 1870 aa12.51□□□□□ -0.41
LINC01228-201ENST00000567966 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.5□□□□□ -0.41
LINC01228-201ENST00000567966 EDIL3O43854 480 aa12.5□□□□□ -0.41
LINC01228-201ENST00000567966 ZNF286BP0CG31 522 aa12.5□□□□□ -0.41
LINC01228-201ENST00000567966 SYT1P21579 422 aa12.5□□□□□ -0.41
LINC01228-201ENST00000567966 GUCY1B3Q02153 619 aa12.5□□□□□ -0.41
LINC01228-201ENST00000567966 PTPN11Q06124 597 aaPredicted RBP12.5□□□□□ -0.41
LINC01228-201ENST00000567966 ADGRE1Q14246 886 aa12.5□□□□□ -0.41
LINC01228-201ENST00000567966 GPNMBQ14956 572 aa12.5□□□□□ -0.41
LINC01228-201ENST00000567966 PTGISQ16647 500 aa12.5□□□□□ -0.41
LINC01228-201ENST00000567966 INF2Q27J81 1249 aa12.5□□□□□ -0.41
LINC01228-201ENST00000567966 BRAPQ7Z569 592 aa12.5□□□□□ -0.41
LINC01228-201ENST00000567966 PLA2G4DQ86XP0 818 aa12.5□□□□□ -0.41
LINC01228-201ENST00000567966 PPTC7Q8NI37 304 aa12.5□□□□□ -0.41
LINC01228-201ENST00000567966 CYP2W1Q8TAV3 490 aa12.5□□□□□ -0.41
LINC01228-201ENST00000567966 MS4A3Q96HJ5 214 aa12.5□□□□□ -0.41
LINC01228-201ENST00000567966 MTIF3Q9H2K0 278 aaKnown RBP12.5□□□□□ -0.41
LINC01228-201ENST00000567966 MLXIPQ9HAP2 919 aa12.5□□□□□ -0.41
LINC01228-201ENST00000567966 AGO4Q9HCK5 861 aaKnown RBP12.5□□□□□ -0.41
LINC01228-201ENST00000567966 HDAC6Q9UBN7 1215 aa12.5□□□□□ -0.41
LINC01228-201ENST00000567966 NOL7Q9UMY1 257 aaKnown RBP12.5□□□□□ -0.41
LINC01228-201ENST00000567966 SLC4A7Q9Y6M7 1214 aa12.5□□□□□ -0.41
LINC01228-201ENST00000567966 PTPRSQ13332 1948 aa12.5□□□□□ -0.41
LINC01228-201ENST00000567966 TET1Q8NFU7 2136 aa12.49□□□□□ -0.41
LINC01228-201ENST00000567966 IPO5O00410 1097 aaKnown RBP12.49□□□□□ -0.41
LINC01228-201ENST00000567966 STK25O00506 426 aa12.49□□□□□ -0.41
LINC01228-201ENST00000567966 HOXD8P13378 290 aaPredicted RBP12.49□□□□□ -0.41
LINC01228-201ENST00000567966 KCNA2P16389 499 aa12.49□□□□□ -0.41
LINC01228-201ENST00000567966 PTMSP20962 102 aa12.49□□□□□ -0.41
LINC01228-201ENST00000567966 UBA1P22314 1058 aaKnown RBP12.49□□□□□ -0.41
LINC01228-201ENST00000567966 DDIT3P35638 169 aa12.49□□□□□ -0.41
LINC01228-201ENST00000567966 PSEN2P49810 448 aa12.49□□□□□ -0.41
LINC01228-201ENST00000567966 ZNF200P98182 395 aaPredicted RBP12.49□□□□□ -0.41
LINC01228-201ENST00000567966 SEMA3FQ13275 785 aa12.49□□□□□ -0.41
LINC01228-201ENST00000567966 PDAP1Q13442 181 aaKnown RBP12.49□□□□□ -0.41
LINC01228-201ENST00000567966 HIC1Q14526 733 aa12.49□□□□□ -0.41
LINC01228-201ENST00000567966 RAB30Q15771 203 aa12.49□□□□□ -0.41
LINC01228-201ENST00000567966 DGKDQ16760 1214 aa12.49□□□□□ -0.41
LINC01228-201ENST00000567966 LETM2Q2VYF4 491 aa12.49□□□□□ -0.41
LINC01228-201ENST00000567966 HSDL1Q3SXM5 330 aa12.49□□□□□ -0.41
LINC01228-201ENST00000567966 PRR16Q569H4 304 aa12.49□□□□□ -0.41
LINC01228-201ENST00000567966 RILPL1Q5EBL4 403 aa12.49□□□□□ -0.41
LINC01228-201ENST00000567966 SESTD1Q86VW0 696 aa12.49□□□□□ -0.41
LINC01228-201ENST00000567966 RETREG2Q8NC44 543 aa12.49□□□□□ -0.41
LINC01228-201ENST00000567966 LENG9Q96B70 501 aa12.49□□□□□ -0.41
LINC01228-201ENST00000567966 SDF4Q9BRK5 362 aa12.49□□□□□ -0.41
LINC01228-201ENST00000567966 ZSCAN16Q9H4T2 348 aaPredicted RBP12.49□□□□□ -0.41
LINC01228-201ENST00000567966 PRDM6Q9NQX0 595 aa12.49□□□□□ -0.41
LINC01228-201ENST00000567966 DDX25Q9UHL0 483 aaKnown RBP12.49□□□□□ -0.41
LINC01228-201ENST00000567966 MSRAQ9UJ68 235 aa12.49□□□□□ -0.41
LINC01228-201ENST00000567966 NOD1Q9Y239 953 aa12.49□□□□□ -0.41
LINC01228-201ENST00000567966 CHD9Q3L8U1 2897 aa12.49□□□□□ -0.41
LINC01228-201ENST00000567966 HAS3O00219 553 aa12.48□□□□□ -0.41
LINC01228-201ENST00000567966 STX6O43752 255 aa12.48□□□□□ -0.41
LINC01228-201ENST00000567966 CCNT1O60563 726 aaKnown RBP12.48□□□□□ -0.41
LINC01228-201ENST00000567966 ATP9AO75110 1047 aa12.48□□□□□ -0.41
LINC01228-201ENST00000567966 BAG4O95429 457 aaKnown RBP12.48□□□□□ -0.41
LINC01228-201ENST00000567966 GGPS1O95749 300 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms