RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 IL21Q9HBE4 155 aa10.59□□□□□ -0.71
CDH13-210ENST00000567445 ADGRG1Q9Y653 693 aa10.59□□□□□ -0.71
CDH13-210ENST00000567445 EMSYQ7Z589 1322 aa10.59□□□□□ -0.71
CDH13-210ENST00000567445 PTPRSQ13332 1948 aa10.59□□□□□ -0.71
CDH13-210ENST00000567445 C17orf102A2RUQ5 167 aa10.58□□□□□ -0.72
CDH13-210ENST00000567445 SPATA31C2B4DYI2 1134 aa10.58□□□□□ -0.72
CDH13-210ENST00000567445 PIK3CDO00329 1044 aa10.58□□□□□ -0.72
CDH13-210ENST00000567445 NOP56O00567 594 aaKnown RBP10.58□□□□□ -0.72
CDH13-210ENST00000567445 FIBPO43427 364 aa10.58□□□□□ -0.72
CDH13-210ENST00000567445 PRC1O43663 620 aa10.58□□□□□ -0.72
CDH13-210ENST00000567445 GJB5O95377 273 aa10.58□□□□□ -0.72
CDH13-210ENST00000567445 LGALS2P05162 132 aa10.58□□□□□ -0.72
CDH13-210ENST00000567445 HOXC8P31273 242 aa10.58□□□□□ -0.72
CDH13-210ENST00000567445 MCM5P33992 734 aa10.58□□□□□ -0.72
CDH13-210ENST00000567445 GNAQP50148 359 aa10.58□□□□□ -0.72
CDH13-210ENST00000567445 MBTPS1Q14703 1052 aa10.58□□□□□ -0.72
CDH13-210ENST00000567445 PCNX4Q63HM2 1172 aa10.58□□□□□ -0.72
CDH13-210ENST00000567445 XRRA1Q6P2D8 792 aa10.58□□□□□ -0.72
CDH13-210ENST00000567445 TMCO2Q7Z6W1 182 aaPredicted RBP10.58□□□□□ -0.72
CDH13-210ENST00000567445 TMTC2Q8N394 836 aa10.58□□□□□ -0.72
CDH13-210ENST00000567445 SMARCC2Q8TAQ2 1214 aa10.58□□□□□ -0.72
CDH13-210ENST00000567445 ATP6V0A1Q93050 837 aa10.58□□□□□ -0.72
CDH13-210ENST00000567445 RAD9AQ99638 391 aa10.58□□□□□ -0.72
CDH13-210ENST00000567445 LZTS2Q9BRK4 669 aa10.58□□□□□ -0.72
CDH13-210ENST00000567445 MYL10Q9BUA6 226 aa10.58□□□□□ -0.72
CDH13-210ENST00000567445 USP26Q9BXU7 913 aa10.58□□□□□ -0.72
CDH13-210ENST00000567445 BCAS3Q9H6U6 928 aa10.58□□□□□ -0.72
CDH13-210ENST00000567445 RTEL1Q9NZ71 1219 aa10.58□□□□□ -0.72
CDH13-210ENST00000567445 SEC63Q9UGP8 760 aaKnown RBP10.58□□□□□ -0.72
CDH13-210ENST00000567445 LCHNA4D1U4 455 aa10.57□□□□□ -0.72
CDH13-210ENST00000567445 RSPH10B2B2RC85 870 aa10.57□□□□□ -0.72
CDH13-210ENST00000567445 SH2B2O14492 632 aaPredicted RBP10.57□□□□□ -0.72
CDH13-210ENST00000567445 MEIS2O14770 477 aa10.57□□□□□ -0.72
CDH13-210ENST00000567445 LGR5O75473 907 aa10.57□□□□□ -0.72
CDH13-210ENST00000567445 RSPH10BP0C881 870 aa10.57□□□□□ -0.72
CDH13-210ENST00000567445 SMIM10L2AP0DMW4 78 aa10.57□□□□□ -0.72
CDH13-210ENST00000567445 SMIM10L2BP0DMW5 78 aa10.57□□□□□ -0.72
CDH13-210ENST00000567445 THPOP40225 353 aa10.57□□□□□ -0.72
CDH13-210ENST00000567445 SEMA3FQ13275 785 aa10.57□□□□□ -0.72
CDH13-210ENST00000567445 MCM6Q14566 821 aa10.57□□□□□ -0.72
CDH13-210ENST00000567445 SKIV2LQ15477 1246 aaKnown RBP10.57□□□□□ -0.72
CDH13-210ENST00000567445 AAK1Q2M2I8 961 aa10.57□□□□□ -0.72
CDH13-210ENST00000567445 USP17L6PQ6QN14 398 aa10.57□□□□□ -0.72
CDH13-210ENST00000567445 NFXL1Q6ZNB6 911 aa10.57□□□□□ -0.72
CDH13-210ENST00000567445 CYFIP1Q7L576 1253 aa10.57□□□□□ -0.72
CDH13-210ENST00000567445 TMEM87BQ96K49 555 aa10.57□□□□□ -0.72
CDH13-210ENST00000567445 GPR20Q99678 358 aa10.57□□□□□ -0.72
CDH13-210ENST00000567445 LSG1Q9H089 658 aaKnown RBP10.57□□□□□ -0.72
CDH13-210ENST00000567445 CCDC69A6NI79 296 aa10.56□□□□□ -0.72
CDH13-210ENST00000567445 CAND2O75155 1236 aa10.56□□□□□ -0.72
CDH13-210ENST00000567445 PLEKHA8P1O95397 391 aa10.56□□□□□ -0.72
CDH13-210ENST00000567445 CALM1P0DP23 149 aa10.56□□□□□ -0.72
CDH13-210ENST00000567445 CALM2P0DP24 149 aa10.56□□□□□ -0.72
CDH13-210ENST00000567445 CALM3P0DP25 149 aa10.56□□□□□ -0.72
CDH13-210ENST00000567445 LIFRP42702 1097 aa10.56□□□□□ -0.72
CDH13-210ENST00000567445 TFF2Q03403 129 aa10.56□□□□□ -0.72
CDH13-210ENST00000567445 GRB10Q13322 594 aa10.56□□□□□ -0.72
CDH13-210ENST00000567445 KRT40Q6A162 431 aa10.56□□□□□ -0.72
CDH13-210ENST00000567445 SPRED2Q7Z698 418 aa10.56□□□□□ -0.72
CDH13-210ENST00000567445 SRBD1Q8N5C6 995 aaKnown RBP10.56□□□□□ -0.72
CDH13-210ENST00000567445 UHRF1Q96T88 793 aaPredicted RBP10.56□□□□□ -0.72
CDH13-210ENST00000567445 SENP7Q9BQF6 1050 aa10.56□□□□□ -0.72
CDH13-210ENST00000567445 RNPEPQ9H4A4 650 aa10.56□□□□□ -0.72
CDH13-210ENST00000567445 ZNF215Q9UL58 517 aaPredicted RBP10.56□□□□□ -0.72
CDH13-210ENST00000567445 BDP1A6H8Y1 2624 aa10.56□□□□□ -0.72
CDH13-210ENST00000567445 SLC27A2O14975 620 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 TREHO43280 583 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 LPXNO60711 386 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 AMHP03971 560 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 GNAT1P11488 350 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 BMP1P13497 986 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 NLRX1Q86UT6 975 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 TRIM50Q86XT4 487 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 CMTR1Q8N1G2 835 aaKnown RBP10.55□□□□□ -0.72
CDH13-210ENST00000567445 GIMAP8Q8ND71 665 aaPredicted RBP10.55□□□□□ -0.72
CDH13-210ENST00000567445 DBF4BQ8NFT6 615 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 ESYT1Q9BSJ8 1104 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 PSTPIP2Q9H939 334 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 LMCD1Q9NZU5 365 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 COG5Q9UP83 839 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 SLC12A7Q9Y666 1083 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 DOCK5Q9H7D0 1870 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 LINC01553A4QN01 128 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 RXRAP19793 462 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 ERVK-21P61565 698 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 SP4Q02446 784 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 COL9A3Q14050 684 aaPredicted RBP10.55□□□□□ -0.72
CDH13-210ENST00000567445 NECTIN1Q15223 517 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 PLEKHG4Q58EX7 1191 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 CREB3L3Q68CJ9 461 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 FAM117BQ6P1L5 589 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.55□□□□□ -0.72
CDH13-210ENST00000567445 FANCBQ8NB91 859 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 GDPD5Q8WTR4 605 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 SEPT8Q92599 483 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 GPRASP2Q96D09 838 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 CCDC97Q96F63 343 aaPredicted RBP10.55□□□□□ -0.72
CDH13-210ENST00000567445 CDHR1Q96JP9 859 aa10.55□□□□□ -0.72
CDH13-210ENST00000567445 TGS1Q96RS0 853 aaKnown RBP10.55□□□□□ -0.72
CDH13-210ENST00000567445 ANO2Q9NQ90 1003 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms