RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 IGBP1P78318 339 aa17.07■□□□□ 0.32
COMMD4-219ENST00000567399 GDF6Q6KF10 455 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-219ENST00000567399 BRAPQ7Z569 592 aa17.07■□□□□ 0.32
COMMD4-219ENST00000567399 SH3RF1Q7Z6J0 888 aa17.07■□□□□ 0.32
COMMD4-219ENST00000567399 SESTD1Q86VW0 696 aa17.07■□□□□ 0.32
COMMD4-219ENST00000567399 RDM1Q8NG50 284 aa17.07■□□□□ 0.32
COMMD4-219ENST00000567399 HAS1Q92839 578 aa17.07■□□□□ 0.32
COMMD4-219ENST00000567399 ATP6V0A1Q93050 837 aa17.07■□□□□ 0.32
COMMD4-219ENST00000567399 PCYT2Q99447 389 aa17.07■□□□□ 0.32
COMMD4-219ENST00000567399 PPP1R12CQ9BZL4 782 aa17.07■□□□□ 0.32
COMMD4-219ENST00000567399 TTC12Q9H892 705 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-219ENST00000567399 SETD4Q9NVD3 440 aa17.07■□□□□ 0.32
COMMD4-219ENST00000567399 POTEB3A0JP26 581 aa17.06■□□□□ 0.32
COMMD4-219ENST00000567399 WNT7AO00755 349 aa17.06■□□□□ 0.32
COMMD4-219ENST00000567399 CD4P01730 458 aa17.06■□□□□ 0.32
COMMD4-219ENST00000567399 OR52Z1P0C646 297 aa17.06■□□□□ 0.32
COMMD4-219ENST00000567399 CYP2C9P11712 490 aa17.06■□□□□ 0.32
COMMD4-219ENST00000567399 PDIA4P13667 645 aaKnown RBP17.06■□□□□ 0.32
COMMD4-219ENST00000567399 PPFIA1Q13136 1202 aa17.06■□□□□ 0.32
COMMD4-219ENST00000567399 PPP2R5CQ13362 524 aa17.06■□□□□ 0.32
COMMD4-219ENST00000567399 NBR1Q14596 966 aa17.06■□□□□ 0.32
COMMD4-219ENST00000567399 TMEM266Q2M3C6 531 aa17.06■□□□□ 0.32
COMMD4-219ENST00000567399 POTEBQ6S5H4 581 aa17.06■□□□□ 0.32
COMMD4-219ENST00000567399 CCDC60Q8IWA6 550 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-219ENST00000567399 CCDC155Q8N6L0 562 aa17.06■□□□□ 0.32
COMMD4-219ENST00000567399 RETREG2Q8NC44 543 aa17.06■□□□□ 0.32
COMMD4-219ENST00000567399 HIPK3Q9H422 1215 aa17.06■□□□□ 0.32
COMMD4-219ENST00000567399 DAXXQ9UER7 740 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-219ENST00000567399 NRCAMQ92823 1304 aa17.05■□□□□ 0.32
COMMD4-219ENST00000567399 IGKV6D-21A0A0A0MT36 114 aa17.05■□□□□ 0.32
COMMD4-219ENST00000567399 TRIM43BA6NCK2 446 aa17.05■□□□□ 0.32
COMMD4-219ENST00000567399 RRN3P2A6NIE6 340 aa17.05■□□□□ 0.32
COMMD4-219ENST00000567399 KIAA0355O15063 1070 aa17.05■□□□□ 0.32
COMMD4-219ENST00000567399 DKC1O60832 514 aaKnown RBP eCLIP17.05■□□□□ 0.32
COMMD4-219ENST00000567399 ZNF200P98182 395 aaPredicted RBP17.05■□□□□ 0.32
COMMD4-219ENST00000567399 MDM2Q00987 491 aaPredicted RBP17.05■□□□□ 0.32
COMMD4-219ENST00000567399 BFSP2Q13515 415 aa17.05■□□□□ 0.32
COMMD4-219ENST00000567399 PLCB4Q15147 1175 aa17.05■□□□□ 0.32
COMMD4-219ENST00000567399 AFAP1L1Q8TED9 768 aa17.05■□□□□ 0.32
COMMD4-219ENST00000567399 TRIM43Q96BQ3 446 aaPredicted RBP17.05■□□□□ 0.32
COMMD4-219ENST00000567399 TMEM60Q9H2L4 133 aa17.05■□□□□ 0.32
COMMD4-219ENST00000567399 NRBP2Q9NSY0 501 aa17.05■□□□□ 0.32
COMMD4-219ENST00000567399 PCDHB6Q9Y5E3 794 aa17.05■□□□□ 0.32
COMMD4-219ENST00000567399 BRCA2P51587 3418 aa17.05■□□□□ 0.32
COMMD4-219ENST00000567399 HBP1O60381 514 aa17.04■□□□□ 0.32
COMMD4-219ENST00000567399 TIMP1P01033 207 aa17.04■□□□□ 0.32
COMMD4-219ENST00000567399 INSRRP14616 1297 aa17.04■□□□□ 0.32
COMMD4-219ENST00000567399 TECP42680 631 aa17.04■□□□□ 0.32
COMMD4-219ENST00000567399 TOB1P50616 345 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-219ENST00000567399 PTGDRQ13258 359 aa17.04■□□□□ 0.32
COMMD4-219ENST00000567399 GRIK4Q16099 956 aa17.04■□□□□ 0.32
COMMD4-219ENST00000567399 PRPF38BQ5VTL8 546 aaKnown RBP17.04■□□□□ 0.32
COMMD4-219ENST00000567399 FOXD4L5Q5VV16 416 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-219ENST00000567399 BANK1Q8NDB2 785 aa17.04■□□□□ 0.32
COMMD4-219ENST00000567399 ATP8B4Q8TF62 1192 aa17.04■□□□□ 0.32
COMMD4-219ENST00000567399 FOXD4L4Q8WXT5 416 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-219ENST00000567399 BADQ92934 168 aa17.04■□□□□ 0.32
COMMD4-219ENST00000567399 FAM167AQ96KS9 214 aa17.04■□□□□ 0.32
COMMD4-219ENST00000567399 MTMR9Q96QG7 549 aa17.04■□□□□ 0.32
COMMD4-219ENST00000567399 ZSCAN16Q9H4T2 348 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-219ENST00000567399 VAV3Q9UKW4 847 aa17.04■□□□□ 0.32
COMMD4-219ENST00000567399 MAFBQ9Y5Q3 323 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-219ENST00000567399 TREHO43280 583 aa17.03■□□□□ 0.32
COMMD4-219ENST00000567399 P4HBP07237 508 aaKnown RBP17.03■□□□□ 0.32
COMMD4-219ENST00000567399 PTK7Q13308 1070 aa17.03■□□□□ 0.32
COMMD4-219ENST00000567399 EPHA7Q15375 998 aa17.03■□□□□ 0.32
COMMD4-219ENST00000567399 TMEM199Q8N511 208 aa17.03■□□□□ 0.32
COMMD4-219ENST00000567399 LMBR1Q8WVP7 490 aa17.03■□□□□ 0.32
COMMD4-219ENST00000567399 BBXQ8WY36 941 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-219ENST00000567399 RAB34Q9BZG1 259 aa17.03■□□□□ 0.32
COMMD4-219ENST00000567399 TBX21Q9UL17 535 aa17.03■□□□□ 0.32
COMMD4-219ENST00000567399 CEP131Q9UPN4 1083 aa17.03■□□□□ 0.32
COMMD4-219ENST00000567399 MTMR6Q9Y217 621 aa17.03■□□□□ 0.32
COMMD4-219ENST00000567399 ALPK3Q96L96 1907 aa17.02■□□□□ 0.32
COMMD4-219ENST00000567399 DDX11L8A8MPP1 907 aa17.02■□□□□ 0.32
COMMD4-219ENST00000567399 EML1O00423 815 aa17.02■□□□□ 0.32
COMMD4-219ENST00000567399 LAD1O00515 517 aa17.02■□□□□ 0.32
COMMD4-219ENST00000567399 CYP2C18P33260 490 aa17.02■□□□□ 0.32
COMMD4-219ENST00000567399 QARSP47897 775 aaKnown RBP17.02■□□□□ 0.32
COMMD4-219ENST00000567399 CCL23P55773 120 aa17.02■□□□□ 0.32
COMMD4-219ENST00000567399 PSMC5P62195 406 aa17.02■□□□□ 0.32
COMMD4-219ENST00000567399 ZNF484Q5JVG2 852 aa17.02■□□□□ 0.32
COMMD4-219ENST00000567399 DTHD1Q6ZMT9 781 aa17.02■□□□□ 0.32
COMMD4-219ENST00000567399 ERMNQ8TAM6 284 aa17.02■□□□□ 0.32
COMMD4-219ENST00000567399 CAGE1Q8TC20 777 aa17.02■□□□□ 0.32
COMMD4-219ENST00000567399 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.02■□□□□ 0.32
COMMD4-219ENST00000567399 SEPT9Q9UHD8 586 aaPredicted RBP17.02■□□□□ 0.32
COMMD4-219ENST00000567399 TUBE1Q9UJT0 475 aa17.02■□□□□ 0.32
COMMD4-219ENST00000567399 SCN10AQ9Y5Y9 1956 aa17.02■□□□□ 0.31
COMMD4-219ENST00000567399 OATP04181 439 aa17.01■□□□□ 0.31
COMMD4-219ENST00000567399 THPOP40225 353 aa17.01■□□□□ 0.31
COMMD4-219ENST00000567399 MAGEA10P43363 369 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-219ENST00000567399 PRKCEQ02156 737 aa17.01■□□□□ 0.31
COMMD4-219ENST00000567399 MFSD5Q6N075 450 aa17.01■□□□□ 0.31
COMMD4-219ENST00000567399 B3GNT9Q6UX72 402 aa17.01■□□□□ 0.31
COMMD4-219ENST00000567399 RSPH3Q86UC2 560 aa17.01■□□□□ 0.31
COMMD4-219ENST00000567399 TPH2Q8IWU9 490 aa17.01■□□□□ 0.31
COMMD4-219ENST00000567399 DYDC2Q96IM9 177 aa17.01■□□□□ 0.31
COMMD4-219ENST00000567399 NOC4LQ9BVI4 516 aaKnown RBP17.01■□□□□ 0.31
COMMD4-219ENST00000567399 UBE2OQ9C0C9 1292 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms