RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 ST13P5Q8NFI4 369 aaPredicted RBP5.27□□□□□ -1.57
CDH1-211ENST00000567320 AJUBAQ96IF1 538 aa5.27□□□□□ -1.57
CDH1-211ENST00000567320 ADOQ96SZ5 270 aa5.27□□□□□ -1.57
CDH1-211ENST00000567320 CARD11Q9BXL7 1154 aa5.27□□□□□ -1.57
CDH1-211ENST00000567320 ZFR2Q9UPR6 939 aaKnown RBP5.27□□□□□ -1.57
CDH1-211ENST00000567320 PTPN22Q9Y2R2 807 aa5.27□□□□□ -1.57
CDH1-211ENST00000567320 SLC4A7Q9Y6M7 1214 aa5.27□□□□□ -1.57
CDH1-211ENST00000567320 ACOT7O00154 380 aa5.26□□□□□ -1.57
CDH1-211ENST00000567320 KLF4O43474 513 aa5.26□□□□□ -1.57
CDH1-211ENST00000567320 ZNF888P0CJ79 500 aaPredicted RBP5.26□□□□□ -1.57
CDH1-211ENST00000567320 KRT15P19012 456 aa5.26□□□□□ -1.57
CDH1-211ENST00000567320 RAC3P60763 192 aa5.26□□□□□ -1.57
CDH1-211ENST00000567320 ST5P78524 1137 aa5.26□□□□□ -1.57
CDH1-211ENST00000567320 PAK1Q13153 545 aa5.26□□□□□ -1.57
CDH1-211ENST00000567320 PRKD1Q15139 912 aaPredicted RBP5.26□□□□□ -1.57
CDH1-211ENST00000567320 WDR72Q3MJ13 1102 aa5.26□□□□□ -1.57
CDH1-211ENST00000567320 TCTN3Q6NUS6 607 aa5.26□□□□□ -1.57
CDH1-211ENST00000567320 DPP8Q6V1X1 898 aaPredicted RBP5.26□□□□□ -1.57
CDH1-211ENST00000567320 NLGN4XQ8N0W4 816 aa5.26□□□□□ -1.57
CDH1-211ENST00000567320 Q8N1X5 172 aa5.26□□□□□ -1.57
CDH1-211ENST00000567320 WDR48Q8TAF3 677 aa5.26□□□□□ -1.57
CDH1-211ENST00000567320 NEIL1Q96FI4 390 aaPredicted RBP5.26□□□□□ -1.57
CDH1-211ENST00000567320 WWC2-AS2Q96NR7 200 aa5.26□□□□□ -1.57
CDH1-211ENST00000567320 CCDC9Q9Y3X0 531 aaKnown RBP5.26□□□□□ -1.57
CDH1-211ENST00000567320 ASXL2Q76L83 1435 aa5.25□□□□□ -1.57
CDH1-211ENST00000567320 CYR61O00622 381 aa5.25□□□□□ -1.57
CDH1-211ENST00000567320 FOXS1O43638 330 aa5.25□□□□□ -1.57
CDH1-211ENST00000567320 STK10O94804 968 aaKnown RBP5.25□□□□□ -1.57
CDH1-211ENST00000567320 IL18BPO95998 194 aa5.25□□□□□ -1.57
CDH1-211ENST00000567320 EPHA5P54756 1037 aa5.25□□□□□ -1.57
CDH1-211ENST00000567320 DBPQ10586 325 aaPredicted RBP5.25□□□□□ -1.57
CDH1-211ENST00000567320 RAB33AQ14088 237 aa5.25□□□□□ -1.57
CDH1-211ENST00000567320 NRN1LQ496H8 165 aa5.25□□□□□ -1.57
CDH1-211ENST00000567320 ARHGAP36Q6ZRI8 547 aa5.25□□□□□ -1.57
CDH1-211ENST00000567320 SLC43A3Q8NBI5 491 aa5.25□□□□□ -1.57
CDH1-211ENST00000567320 ZNF428Q96B54 188 aa5.25□□□□□ -1.57
CDH1-211ENST00000567320 SPATA9Q9BWV2 254 aa5.25□□□□□ -1.57
CDH1-211ENST00000567320 CSRNP2Q9H175 543 aa5.25□□□□□ -1.57
CDH1-211ENST00000567320 C12orf65Q9H3J6 166 aaKnown RBP5.25□□□□□ -1.57
CDH1-211ENST00000567320 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.24□□□□□ -1.57
CDH1-211ENST00000567320 AQP7O14520 342 aa5.24□□□□□ -1.57
CDH1-211ENST00000567320 SLPIP03973 132 aa5.24□□□□□ -1.57
CDH1-211ENST00000567320 SRGAP2CP0DJJ0 459 aa5.24□□□□□ -1.57
CDH1-211ENST00000567320 PTPN1P18031 435 aaKnown RBP5.24□□□□□ -1.57
CDH1-211ENST00000567320 POLD1P28340 1107 aa5.24□□□□□ -1.57
CDH1-211ENST00000567320 RBM25P49756 843 aaKnown RBP5.24□□□□□ -1.57
CDH1-211ENST00000567320 GUCY1A3Q02108 690 aa5.24□□□□□ -1.57
CDH1-211ENST00000567320 R3HDM1Q15032 1099 aaKnown RBP5.24□□□□□ -1.57
CDH1-211ENST00000567320 GPR19Q15760 415 aa5.24□□□□□ -1.57
CDH1-211ENST00000567320 HABP4Q5JVS0 413 aaKnown RBP5.24□□□□□ -1.57
CDH1-211ENST00000567320 PTRH1Q86Y79 214 aaKnown RBP5.24□□□□□ -1.57
CDH1-211ENST00000567320 CKAP2LQ8IYA6 745 aa5.24□□□□□ -1.57
CDH1-211ENST00000567320 FBXW5Q969U6 566 aa5.24□□□□□ -1.57
CDH1-211ENST00000567320 KATNBL1Q9H079 304 aa5.24□□□□□ -1.57
CDH1-211ENST00000567320 PFDN2Q9UHV9 154 aa5.24□□□□□ -1.57
CDH1-211ENST00000567320 TESMINQ9Y4I5 508 aa5.24□□□□□ -1.57
CDH1-211ENST00000567320 PCDHA8Q9Y5H6 950 aa5.24□□□□□ -1.57
CDH1-211ENST00000567320 ATP23Q9Y6H3 246 aa5.24□□□□□ -1.57
CDH1-211ENST00000567320 PRAMEF25A6NGN4 478 aa5.23□□□□□ -1.57
CDH1-211ENST00000567320 CDC14BO60729 498 aa5.23□□□□□ -1.57
CDH1-211ENST00000567320 CUTAO60888 179 aa5.23□□□□□ -1.57
CDH1-211ENST00000567320 APPP05067 770 aa5.23□□□□□ -1.57
CDH1-211ENST00000567320 COMTP21964 271 aa5.23□□□□□ -1.57
CDH1-211ENST00000567320 ACVRL1P37023 503 aa5.23□□□□□ -1.57
CDH1-211ENST00000567320 ADCY8P40145 1251 aa5.23□□□□□ -1.57
CDH1-211ENST00000567320 KCNQ1P51787 676 aa5.23□□□□□ -1.57
CDH1-211ENST00000567320 SSRP1Q08945 709 aaKnown RBP5.23□□□□□ -1.57
CDH1-211ENST00000567320 NOLC1Q14978 699 aaKnown RBP eCLIP5.23□□□□□ -1.57
CDH1-211ENST00000567320 MTERF2Q49AM1 385 aa5.23□□□□□ -1.57
CDH1-211ENST00000567320 SPATC1Q76KD6 591 aa5.23□□□□□ -1.57
CDH1-211ENST00000567320 OSTM1Q86WC4 334 aa5.23□□□□□ -1.57
CDH1-211ENST00000567320 SCUBE1Q8IWY4 988 aa5.23□□□□□ -1.57
CDH1-211ENST00000567320 SH3RF2Q8TEC5 729 aa5.23□□□□□ -1.57
CDH1-211ENST00000567320 OR14A2Q96R54 314 aa5.23□□□□□ -1.57
CDH1-211ENST00000567320 SRPK3Q9UPE1 567 aa5.23□□□□□ -1.57
CDH1-211ENST00000567320 NR2E1Q9Y466 385 aa5.23□□□□□ -1.57
CDH1-211ENST00000567320 TCRBV5S4A2TA0A5A2 114 aa5.22□□□□□ -1.57
CDH1-211ENST00000567320 FAM90A27PA6NNH2 459 aa5.22□□□□□ -1.57
CDH1-211ENST00000567320 KCNK3O14649 394 aa5.22□□□□□ -1.57
CDH1-211ENST00000567320 HMGCRP04035 888 aa5.22□□□□□ -1.57
CDH1-211ENST00000567320 PYGMP11217 842 aa5.22□□□□□ -1.57
CDH1-211ENST00000567320 PDE6AP16499 860 aa5.22□□□□□ -1.57
CDH1-211ENST00000567320 CR2P20023 1033 aa5.22□□□□□ -1.57
CDH1-211ENST00000567320 DNM2P50570 870 aa5.22□□□□□ -1.57
CDH1-211ENST00000567320 CRY1Q16526 586 aa5.22□□□□□ -1.57
CDH1-211ENST00000567320 USP39Q53GS9 565 aaKnown RBP5.22□□□□□ -1.57
CDH1-211ENST00000567320 ZMAT1Q5H9K5 638 aa5.22□□□□□ -1.57
CDH1-211ENST00000567320 OTOP2Q7RTS6 562 aa5.22□□□□□ -1.57
CDH1-211ENST00000567320 MAMDC2Q7Z304 686 aaPredicted RBP5.22□□□□□ -1.57
CDH1-211ENST00000567320 ZC3H7AQ8IWR0 971 aaKnown RBP5.22□□□□□ -1.57
CDH1-211ENST00000567320 FUKQ8N0W3 1084 aa5.22□□□□□ -1.57
CDH1-211ENST00000567320 PTPRN2Q92932 1015 aa5.22□□□□□ -1.57
CDH1-211ENST00000567320 GMLQ99445 158 aa5.22□□□□□ -1.57
CDH1-211ENST00000567320 DPYSL5Q9BPU6 564 aa5.22□□□□□ -1.57
CDH1-211ENST00000567320 PDGFDQ9GZP0 370 aaPredicted RBP5.22□□□□□ -1.57
CDH1-211ENST00000567320 OAZ3Q9UMX2 235 aa5.22□□□□□ -1.57
CDH1-211ENST00000567320 TRBV23-1A0A0A0MS06 115 aa5.21□□□□□ -1.58
CDH1-211ENST00000567320 NPIPB8E9PQR5 432 aa5.21□□□□□ -1.58
CDH1-211ENST00000567320 GSTA4O15217 222 aa5.21□□□□□ -1.58
CDH1-211ENST00000567320 PDPK1O15530 556 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms