RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 HAS3O00219 553 aa13.7□□□□□ -0.22
SF3B3-208ENST00000567250 WNT7AO00755 349 aa13.7□□□□□ -0.22
SF3B3-208ENST00000567250 PQBP1O60828 265 aaKnown RBP13.7□□□□□ -0.22
SF3B3-208ENST00000567250 GNAT1P11488 350 aa13.7□□□□□ -0.22
SF3B3-208ENST00000567250 PRPHP41219 470 aa13.7□□□□□ -0.22
SF3B3-208ENST00000567250 TXKP42681 527 aa13.7□□□□□ -0.22
SF3B3-208ENST00000567250 TOB1P50616 345 aaPredicted RBP13.7□□□□□ -0.22
SF3B3-208ENST00000567250 NBPF20Q3BBV1 942 aa13.7□□□□□ -0.22
SF3B3-208ENST00000567250 ABHD15Q6UXT9 468 aa13.7□□□□□ -0.22
SF3B3-208ENST00000567250 ANKRD33Q7Z3H0 272 aa13.7□□□□□ -0.22
SF3B3-208ENST00000567250 TRIM50Q86XT4 487 aa13.7□□□□□ -0.22
SF3B3-208ENST00000567250 CCDC60Q8IWA6 550 aaPredicted RBP13.7□□□□□ -0.22
SF3B3-208ENST00000567250 SLC43A3Q8NBI5 491 aa13.7□□□□□ -0.22
SF3B3-208ENST00000567250 NEK9Q8TD19 979 aa13.7□□□□□ -0.22
SF3B3-208ENST00000567250 DPF3Q92784 378 aa13.7□□□□□ -0.22
SF3B3-208ENST00000567250 KAT2BQ92831 832 aa13.7□□□□□ -0.22
SF3B3-208ENST00000567250 HAS1Q92839 578 aa13.7□□□□□ -0.22
SF3B3-208ENST00000567250 FAM167AQ96KS9 214 aa13.7□□□□□ -0.22
SF3B3-208ENST00000567250 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.7□□□□□ -0.22
SF3B3-208ENST00000567250 PRKAG2Q9UGJ0 569 aa13.7□□□□□ -0.22
SF3B3-208ENST00000567250 NOD1Q9Y239 953 aa13.7□□□□□ -0.22
SF3B3-208ENST00000567250 PCDHB6Q9Y5E3 794 aa13.7□□□□□ -0.22
SF3B3-208ENST00000567250 NR2E3Q9Y5X4 410 aa13.7□□□□□ -0.22
SF3B3-208ENST00000567250 NRCAMQ92823 1304 aa13.69□□□□□ -0.22
SF3B3-208ENST00000567250 F13A1P00488 732 aa13.69□□□□□ -0.22
SF3B3-208ENST00000567250 CLTBP09497 229 aa13.69□□□□□ -0.22
SF3B3-208ENST00000567250 ZSCAN22P10073 491 aaPredicted RBP13.69□□□□□ -0.22
SF3B3-208ENST00000567250 CDK7P50613 346 aa13.69□□□□□ -0.22
SF3B3-208ENST00000567250 PTGDRQ13258 359 aa13.69□□□□□ -0.22
SF3B3-208ENST00000567250 NBR1Q14596 966 aa13.69□□□□□ -0.22
SF3B3-208ENST00000567250 HAUS3Q68CZ6 603 aa13.69□□□□□ -0.22
SF3B3-208ENST00000567250 NCAPH2Q6IBW4 605 aa13.69□□□□□ -0.22
SF3B3-208ENST00000567250 PDXDC2PQ6P474 469 aa13.69□□□□□ -0.22
SF3B3-208ENST00000567250 B3GNT9Q6UX72 402 aa13.69□□□□□ -0.22
SF3B3-208ENST00000567250 FAM126BQ8IXS8 530 aa13.69□□□□□ -0.22
SF3B3-208ENST00000567250 GJA10Q969M2 543 aa13.69□□□□□ -0.22
SF3B3-208ENST00000567250 MTMR9Q96QG7 549 aa13.69□□□□□ -0.22
SF3B3-208ENST00000567250 TMEM60Q9H2L4 133 aa13.69□□□□□ -0.22
SF3B3-208ENST00000567250 GTF2IRD1Q9UHL9 959 aa13.69□□□□□ -0.22
SF3B3-208ENST00000567250 TRPC6Q9Y210 931 aa13.69□□□□□ -0.22
SF3B3-208ENST00000567250 STK24Q9Y6E0 443 aa13.69□□□□□ -0.22
SF3B3-208ENST00000567250 C17orf102A2RUQ5 167 aa13.68□□□□□ -0.22
SF3B3-208ENST00000567250 MARK3P27448 753 aa13.68□□□□□ -0.22
SF3B3-208ENST00000567250 ATP2C1P98194 919 aaPredicted RBP13.68□□□□□ -0.22
SF3B3-208ENST00000567250 TLE2Q04725 743 aa13.68□□□□□ -0.22
SF3B3-208ENST00000567250 SPIRE1Q08AE8 756 aa13.68□□□□□ -0.22
SF3B3-208ENST00000567250 ARL6IP4Q66PJ3 421 aaKnown RBP13.68□□□□□ -0.22
SF3B3-208ENST00000567250 SWSAP1Q6NVH7 229 aa13.68□□□□□ -0.22
SF3B3-208ENST00000567250 CKAP2LQ8IYA6 745 aa13.68□□□□□ -0.22
SF3B3-208ENST00000567250 C7orf61Q8IZ16 206 aa13.68□□□□□ -0.22
SF3B3-208ENST00000567250 CCDC155Q8N6L0 562 aa13.68□□□□□ -0.22
SF3B3-208ENST00000567250 ERMNQ8TAM6 284 aa13.68□□□□□ -0.22
SF3B3-208ENST00000567250 ZNF396Q96N95 335 aaPredicted RBP13.68□□□□□ -0.22
SF3B3-208ENST00000567250 PCYT2Q99447 389 aa13.68□□□□□ -0.22
SF3B3-208ENST00000567250 HDAC6Q9UBN7 1215 aa13.68□□□□□ -0.22
SF3B3-208ENST00000567250 GABBR1Q9UBS5 961 aa13.68□□□□□ -0.22
SF3B3-208ENST00000567250 MAFBQ9Y5Q3 323 aaPredicted RBP13.68□□□□□ -0.22
SF3B3-208ENST00000567250 COL1A2P08123 1366 aa13.68□□□□□ -0.22
SF3B3-208ENST00000567250 GRIN2DO15399 1336 aa13.67□□□□□ -0.22
SF3B3-208ENST00000567250 HBP1O60381 514 aa13.67□□□□□ -0.22
SF3B3-208ENST00000567250 SMIM10L2AP0DMW4 78 aa13.67□□□□□ -0.22
SF3B3-208ENST00000567250 SMIM10L2BP0DMW5 78 aa13.67□□□□□ -0.22
SF3B3-208ENST00000567250 FXR2P51116 673 aaKnown RBP eCLIP13.67□□□□□ -0.224e-9■■■■□ 19.9
SF3B3-208ENST00000567250 PSMC5P62195 406 aa13.67□□□□□ -0.22
SF3B3-208ENST00000567250 PPFIA1Q13136 1202 aa13.67□□□□□ -0.22
SF3B3-208ENST00000567250 EPHA7Q15375 998 aa13.67□□□□□ -0.22
SF3B3-208ENST00000567250 DTHD1Q6ZMT9 781 aa13.67□□□□□ -0.22
SF3B3-208ENST00000567250 ATP8B4Q8TF62 1192 aa13.67□□□□□ -0.22
SF3B3-208ENST00000567250 BBXQ8WY36 941 aaPredicted RBP13.67□□□□□ -0.22
SF3B3-208ENST00000567250 TELO2Q9Y4R8 837 aa13.67□□□□□ -0.22
SF3B3-208ENST00000567250 ATP6V1DQ9Y5K8 247 aa13.67□□□□□ -0.22
SF3B3-208ENST00000567250 TRIP12Q14669 1992 aaPredicted RBP13.67□□□□□ -0.22
SF3B3-208ENST00000567250 POTEB3A0JP26 581 aa13.66□□□□□ -0.22
SF3B3-208ENST00000567250 POTEMA6NI47 508 aa13.66□□□□□ -0.22
SF3B3-208ENST00000567250 RRN3P2A6NIE6 340 aa13.66□□□□□ -0.22
SF3B3-208ENST00000567250 B4GALT4O60513 344 aa13.66□□□□□ -0.22
SF3B3-208ENST00000567250 OATP04181 439 aa13.66□□□□□ -0.22
SF3B3-208ENST00000567250 RPLP2P05387 115 aaKnown RBP13.66□□□□□ -0.22
SF3B3-208ENST00000567250 P4HBP07237 508 aaKnown RBP13.66□□□□□ -0.22
SF3B3-208ENST00000567250 TECP42680 631 aa13.66□□□□□ -0.22
SF3B3-208ENST00000567250 QARSP47897 775 aaKnown RBP13.66□□□□□ -0.22
SF3B3-208ENST00000567250 NUCB2P80303 420 aa13.66□□□□□ -0.22
SF3B3-208ENST00000567250 PRKCEQ02156 737 aa13.66□□□□□ -0.22
SF3B3-208ENST00000567250 PLCB4Q15147 1175 aa13.66□□□□□ -0.22
SF3B3-208ENST00000567250 SF3A1Q15459 793 aaKnown RBP13.66□□□□□ -0.22
SF3B3-208ENST00000567250 GRIK4Q16099 956 aa13.66□□□□□ -0.22
SF3B3-208ENST00000567250 PTGISQ16647 500 aa13.66□□□□□ -0.22
SF3B3-208ENST00000567250 POTEBQ6S5H4 581 aa13.66□□□□□ -0.22
SF3B3-208ENST00000567250 PRDM5Q9NQX1 630 aaPredicted RBP13.66□□□□□ -0.22
SF3B3-208ENST00000567250 PDLIM7Q9NR12 457 aa13.66□□□□□ -0.22
SF3B3-208ENST00000567250 EML1O00423 815 aa13.65□□□□□ -0.22
SF3B3-208ENST00000567250 BRD1O95696 1058 aa13.65□□□□□ -0.22
SF3B3-208ENST00000567250 CD4P01730 458 aa13.65□□□□□ -0.22
SF3B3-208ENST00000567250 HOXC8P31273 242 aa13.65□□□□□ -0.22
SF3B3-208ENST00000567250 FAAP100Q0VG06 881 aa13.65□□□□□ -0.22
SF3B3-208ENST00000567250 XKR3Q5GH77 459 aa13.65□□□□□ -0.22
SF3B3-208ENST00000567250 ATL3Q6DD88 541 aa13.65□□□□□ -0.22
SF3B3-208ENST00000567250 GDF6Q6KF10 455 aaPredicted RBP13.65□□□□□ -0.22
SF3B3-208ENST00000567250 C4orf32Q8N8J7 132 aa13.65□□□□□ -0.22
SF3B3-208ENST00000567250 BANK1Q8NDB2 785 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms