RNA–Protein interactions for RNA: ENST00000567195.5

COMMD4-217, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-217ENST00000567195 SETD4Q9NVD3 440 aa17.71■□□□□ 0.43
COMMD4-217ENST00000567195 PCDHA10Q9Y5I2 948 aa17.71■□□□□ 0.43
COMMD4-217ENST00000567195 UMODL1Q5DID0 1318 aa17.71■□□□□ 0.42
COMMD4-217ENST00000567195 IGKV6D-21A0A0A0MT36 114 aa17.7■□□□□ 0.42
COMMD4-217ENST00000567195 FAM205CA6NFA0 338 aa17.7■□□□□ 0.42
COMMD4-217ENST00000567195 SLC37A4O43826 429 aa17.7■□□□□ 0.42
COMMD4-217ENST00000567195 PSMD10O75832 226 aa17.7■□□□□ 0.42
COMMD4-217ENST00000567195 BAG4O95429 457 aaKnown RBP17.7■□□□□ 0.42
COMMD4-217ENST00000567195 CSF2RAP15509 400 aa17.7■□□□□ 0.42
COMMD4-217ENST00000567195 SFNP31947 248 aa17.7■□□□□ 0.42
COMMD4-217ENST00000567195 FXR1P51114 621 aaKnown RBP eCLIP17.7■□□□□ 0.42
COMMD4-217ENST00000567195 JAK3P52333 1124 aa17.7■□□□□ 0.42
COMMD4-217ENST00000567195 SWSAP1Q6NVH7 229 aa17.7■□□□□ 0.42
COMMD4-217ENST00000567195 PDXDC2PQ6P474 469 aa17.7■□□□□ 0.42
COMMD4-217ENST00000567195 ETNPPLQ8TBG4 499 aa17.7■□□□□ 0.42
COMMD4-217ENST00000567195 AFAP1L1Q8TED9 768 aa17.7■□□□□ 0.42
COMMD4-217ENST00000567195 TRPC6Q9Y210 931 aa17.7■□□□□ 0.42
COMMD4-217ENST00000567195 TBX3O15119 743 aa17.69■□□□□ 0.42
COMMD4-217ENST00000567195 CHMP2AO43633 222 aa17.69■□□□□ 0.42
COMMD4-217ENST00000567195 HOXC8P31273 242 aa17.69■□□□□ 0.42
COMMD4-217ENST00000567195 PPFIA1Q13136 1202 aa17.69■□□□□ 0.42
COMMD4-217ENST00000567195 HIC1Q14526 733 aa17.69■□□□□ 0.42
COMMD4-217ENST00000567195 CCDC60Q8IWA6 550 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-217ENST00000567195 RPUSD2Q8IZ73 545 aaKnown RBP17.69■□□□□ 0.42
COMMD4-217ENST00000567195 GJA10Q969M2 543 aa17.69■□□□□ 0.42
COMMD4-217ENST00000567195 CTAGE1Q96RT6 745 aa17.69■□□□□ 0.42
COMMD4-217ENST00000567195 WNT8AQ9H1J5 351 aa17.69■□□□□ 0.42
COMMD4-217ENST00000567195 UNC45AQ9H3U1 944 aa17.69■□□□□ 0.42
COMMD4-217ENST00000567195 DISC1Q9NRI5 854 aa17.69■□□□□ 0.42
COMMD4-217ENST00000567195 KAT6AQ92794 2004 aa17.69■□□□□ 0.42
COMMD4-217ENST00000567195 POTEB3A0JP26 581 aa17.68■□□□□ 0.42
COMMD4-217ENST00000567195 RRN3P2A6NIE6 340 aa17.68■□□□□ 0.42
COMMD4-217ENST00000567195 H3BQV1 296 aa17.68■□□□□ 0.42
COMMD4-217ENST00000567195 TREHO43280 583 aa17.68■□□□□ 0.42
COMMD4-217ENST00000567195 RFC2P35250 354 aa17.68■□□□□ 0.42
COMMD4-217ENST00000567195 CUL4AQ13619 759 aa17.68■□□□□ 0.42
COMMD4-217ENST00000567195 PLCB4Q15147 1175 aa17.68■□□□□ 0.42
COMMD4-217ENST00000567195 GRIK4Q16099 956 aa17.68■□□□□ 0.42
COMMD4-217ENST00000567195 GPR153Q6NV75 609 aa17.68■□□□□ 0.42
COMMD4-217ENST00000567195 POTEBQ6S5H4 581 aa17.68■□□□□ 0.42
COMMD4-217ENST00000567195 MIER3Q7Z3K6 550 aa17.68■□□□□ 0.42
COMMD4-217ENST00000567195 SERINC5Q86VE9 423 aa17.68■□□□□ 0.42
COMMD4-217ENST00000567195 NOSTRINQ8IVI9 506 aa17.68■□□□□ 0.42
COMMD4-217ENST00000567195 CKAP2LQ8IYA6 745 aa17.68■□□□□ 0.42
COMMD4-217ENST00000567195 SLFN12Q8IYM2 578 aa17.68■□□□□ 0.42
COMMD4-217ENST00000567195 RDM1Q8NG50 284 aa17.68■□□□□ 0.42
COMMD4-217ENST00000567195 LMBR1Q8WVP7 490 aa17.68■□□□□ 0.42
COMMD4-217ENST00000567195 SCLYQ96I15 445 aa17.68■□□□□ 0.42
COMMD4-217ENST00000567195 MTIF3Q9H2K0 278 aaKnown RBP17.68■□□□□ 0.42
COMMD4-217ENST00000567195 KCNMB3Q9NPA1 279 aa17.68■□□□□ 0.42
COMMD4-217ENST00000567195 IL23AQ9NPF7 189 aa17.68■□□□□ 0.42
COMMD4-217ENST00000567195 GABBR1Q9UBS5 961 aa17.68■□□□□ 0.42
COMMD4-217ENST00000567195 HBP1O60381 514 aa17.67■□□□□ 0.42
COMMD4-217ENST00000567195 IQCF3P0C7M6 154 aa17.67■□□□□ 0.42
COMMD4-217ENST00000567195 CKBP12277 381 aa17.67■□□□□ 0.42
COMMD4-217ENST00000567195 INSRRP14616 1297 aa17.67■□□□□ 0.42
COMMD4-217ENST00000567195 SELPP16109 830 aa17.67■□□□□ 0.42
COMMD4-217ENST00000567195 ATP2B1P20020 1258 aa17.67■□□□□ 0.42
COMMD4-217ENST00000567195 IGBP1P78318 339 aa17.67■□□□□ 0.42
COMMD4-217ENST00000567195 RBL2Q08999 1139 aa17.67■□□□□ 0.42
COMMD4-217ENST00000567195 SHHQ15465 462 aa17.67■□□□□ 0.42
COMMD4-217ENST00000567195 PSRC1Q6PGN9 363 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-217ENST00000567195 POTEDQ86YR6 584 aa17.67■□□□□ 0.42
COMMD4-217ENST00000567195 DHX38Q92620 1227 aaKnown RBP17.67■□□□□ 0.42
COMMD4-217ENST00000567195 NOL7Q9UMY1 257 aaKnown RBP17.67■□□□□ 0.42
COMMD4-217ENST00000567195 MAFBQ9Y5Q3 323 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-217ENST00000567195 K7ELQ4 463 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-217ENST00000567195 NEMFO60524 1076 aa17.66■□□□□ 0.42
COMMD4-217ENST00000567195 PARNO95453 639 aaKnown RBP17.66■□□□□ 0.42
COMMD4-217ENST00000567195 PFKMP08237 780 aa17.66■□□□□ 0.42
COMMD4-217ENST00000567195 ACRP10323 421 aa17.66■□□□□ 0.42
COMMD4-217ENST00000567195 THPOP40225 353 aa17.66■□□□□ 0.42
COMMD4-217ENST00000567195 EPHB4P54760 987 aa17.66■□□□□ 0.42
COMMD4-217ENST00000567195 ADAM17P78536 824 aa17.66■□□□□ 0.42
COMMD4-217ENST00000567195 CALCRLQ16602 461 aa17.66■□□□□ 0.42
COMMD4-217ENST00000567195 LARP1BQ659C4 914 aaKnown RBP17.66■□□□□ 0.42
COMMD4-217ENST00000567195 MCTP1Q6DN14 999 aa17.66■□□□□ 0.42
COMMD4-217ENST00000567195 LRRC8DQ7L1W4 858 aa17.66■□□□□ 0.42
COMMD4-217ENST00000567195 ATP8B4Q8TF62 1192 aa17.66■□□□□ 0.42
COMMD4-217ENST00000567195 TUBE1Q9UJT0 475 aa17.66■□□□□ 0.42
COMMD4-217ENST00000567195 CAND2O75155 1236 aa17.65■□□□□ 0.42
COMMD4-217ENST00000567195 FGBP02675 491 aa17.65■□□□□ 0.42
COMMD4-217ENST00000567195 U2AF2P26368 475 aaKnown RBP eCLIP17.65■□□□□ 0.42
COMMD4-217ENST00000567195 TRAPPC10P48553 1259 aa17.65■□□□□ 0.42
COMMD4-217ENST00000567195 PPP2R5CQ13362 524 aa17.65■□□□□ 0.42
COMMD4-217ENST00000567195 TRIM71Q2Q1W2 868 aaKnown RBP17.65■□□□□ 0.42
COMMD4-217ENST00000567195 C9orf50Q5SZB4 431 aa17.65■□□□□ 0.42
COMMD4-217ENST00000567195 TAF2Q6P1X5 1199 aa17.65■□□□□ 0.42
COMMD4-217ENST00000567195 DEFB128Q7Z7B8 93 aa17.65■□□□□ 0.42
COMMD4-217ENST00000567195 RSPH3Q86UC2 560 aa17.65■□□□□ 0.42
COMMD4-217ENST00000567195 BBXQ8WY36 941 aaPredicted RBP17.65■□□□□ 0.42
COMMD4-217ENST00000567195 HAS1Q92839 578 aa17.65■□□□□ 0.42
COMMD4-217ENST00000567195 SNX21Q969T3 373 aa17.65■□□□□ 0.42
COMMD4-217ENST00000567195 FAM167AQ96KS9 214 aa17.65■□□□□ 0.42
COMMD4-217ENST00000567195 RNPC3Q96LT9 517 aaKnown RBP17.65■□□□□ 0.42
COMMD4-217ENST00000567195 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.65■□□□□ 0.42
COMMD4-217ENST00000567195 NRBP2Q9NSY0 501 aa17.65■□□□□ 0.42
COMMD4-217ENST00000567195 TRIP12Q14669 1992 aaPredicted RBP17.65■□□□□ 0.42
COMMD4-217ENST00000567195 KIF28PB7ZC32 967 aa17.64■□□□□ 0.41
COMMD4-217ENST00000567195 SLC34A2O95436 690 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms