RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 SBK1Q52WX2 424 aa11.38□□□□□ -0.59
CAPN3-216ENST00000567071 FAM26DQ5JW98 314 aa11.38□□□□□ -0.59
CAPN3-216ENST00000567071 OTOP3Q7RTS5 596 aa11.38□□□□□ -0.59
CAPN3-216ENST00000567071 GPR20Q99678 358 aa11.38□□□□□ -0.59
CAPN3-216ENST00000567071 OSBPL7Q9BZF2 842 aa11.38□□□□□ -0.59
CAPN3-216ENST00000567071 RANBP17Q9H2T7 1088 aaKnown RBP11.38□□□□□ -0.59
CAPN3-216ENST00000567071 NGRNQ9NPE2 291 aaKnown RBP11.38□□□□□ -0.59
CAPN3-216ENST00000567071 CDH22Q9UJ99 828 aa11.38□□□□□ -0.59
CAPN3-216ENST00000567071 LRFN2Q9ULH4 789 aa11.38□□□□□ -0.59
CAPN3-216ENST00000567071 ZMIZ1Q9ULJ6 1067 aa11.38□□□□□ -0.59
CAPN3-216ENST00000567071 SIT1Q9Y3P8 196 aa11.38□□□□□ -0.59
CAPN3-216ENST00000567071 PCDHGA2Q9Y5H1 932 aa11.38□□□□□ -0.59
CAPN3-216ENST00000567071 IGF2RP11717 2491 aa11.38□□□□□ -0.59
CAPN3-216ENST00000567071 KAT6AQ92794 2004 aa11.37□□□□□ -0.59
CAPN3-216ENST00000567071 CFHP08603 1231 aa11.37□□□□□ -0.59
CAPN3-216ENST00000567071 PRR29P0C7W0 189 aa11.37□□□□□ -0.59
CAPN3-216ENST00000567071 SMIM10L2AP0DMW4 78 aa11.37□□□□□ -0.59
CAPN3-216ENST00000567071 SMIM10L2BP0DMW5 78 aa11.37□□□□□ -0.59
CAPN3-216ENST00000567071 ARP10275 920 aa11.37□□□□□ -0.59
CAPN3-216ENST00000567071 PMLP29590 882 aa11.37□□□□□ -0.59
CAPN3-216ENST00000567071 ADD2P35612 726 aa11.37□□□□□ -0.59
CAPN3-216ENST00000567071 KIAA1841Q6NSI8 718 aa11.37□□□□□ -0.59
CAPN3-216ENST00000567071 RSPH3Q86UC2 560 aa11.37□□□□□ -0.59
CAPN3-216ENST00000567071 AACSQ86V21 672 aa11.37□□□□□ -0.59
CAPN3-216ENST00000567071 TCF25Q9BQ70 676 aa11.37□□□□□ -0.59
CAPN3-216ENST00000567071 IGSF9Q9P2J2 1179 aa11.37□□□□□ -0.59
CAPN3-216ENST00000567071 DDX41Q9UJV9 622 aaKnown RBP11.37□□□□□ -0.59
CAPN3-216ENST00000567071 RAB23Q9ULC3 237 aa11.37□□□□□ -0.59
CAPN3-216ENST00000567071 H3BRB1 525 aa11.36□□□□□ -0.59
CAPN3-216ENST00000567071 FSCN2O14926 492 aa11.36□□□□□ -0.59
CAPN3-216ENST00000567071 LAMTOR5O43504 91 aa11.36□□□□□ -0.59
CAPN3-216ENST00000567071 TBC1D4O60343 1298 aa11.36□□□□□ -0.59
CAPN3-216ENST00000567071 HOXD8P13378 290 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-216ENST00000567071 RARS2Q5T160 578 aaKnown RBP11.36□□□□□ -0.59
CAPN3-216ENST00000567071 LRSAM1Q6UWE0 723 aa11.36□□□□□ -0.59
CAPN3-216ENST00000567071 NSUN6Q8TEA1 469 aaKnown RBP11.36□□□□□ -0.59
CAPN3-216ENST00000567071 SPATA33Q96N06 139 aa11.36□□□□□ -0.59
CAPN3-216ENST00000567071 IWS1Q96ST2 819 aa11.36□□□□□ -0.59
CAPN3-216ENST00000567071 FTHL17Q9BXU8 183 aa11.36□□□□□ -0.59
CAPN3-216ENST00000567071 RNPEPQ9H4A4 650 aa11.36□□□□□ -0.59
CAPN3-216ENST00000567071 TUT1Q9H6E5 874 aaKnown RBP11.36□□□□□ -0.59
CAPN3-216ENST00000567071 DZANK1Q9NVP4 752 aa11.36□□□□□ -0.59
CAPN3-216ENST00000567071 FBXO4Q9UKT5 387 aa11.36□□□□□ -0.59
CAPN3-216ENST00000567071 CA14Q9ULX7 337 aa11.36□□□□□ -0.59
CAPN3-216ENST00000567071 LZTS1Q9Y250 596 aa11.36□□□□□ -0.59
CAPN3-216ENST00000567071 SPEGQ15772 3267 aa11.36□□□□□ -0.59
CAPN3-216ENST00000567071 UNC79Q9P2D8 2635 aa11.36□□□□□ -0.59
CAPN3-216ENST00000567071 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-216ENST00000567071 PRDM1O75626 825 aa11.35□□□□□ -0.59
CAPN3-216ENST00000567071 WEE2P0C1S8 567 aa11.35□□□□□ -0.59
CAPN3-216ENST00000567071 HOXC8P31273 242 aa11.35□□□□□ -0.59
CAPN3-216ENST00000567071 BMS1Q14692 1282 aaKnown RBP11.35□□□□□ -0.59
CAPN3-216ENST00000567071 SYDE2Q5VT97 1194 aa11.35□□□□□ -0.59
CAPN3-216ENST00000567071 IL31Q6EBC2 164 aa11.35□□□□□ -0.59
CAPN3-216ENST00000567071 PHLDB3Q6NSJ2 640 aa11.35□□□□□ -0.59
CAPN3-216ENST00000567071 CCDC149Q6ZUS6 474 aa11.35□□□□□ -0.59
CAPN3-216ENST00000567071 TMC7Q7Z402 723 aa11.35□□□□□ -0.59
CAPN3-216ENST00000567071 TMEM87AQ8NBN3 555 aa11.35□□□□□ -0.59
CAPN3-216ENST00000567071 NEDD1Q8NHV4 660 aa11.35□□□□□ -0.59
CAPN3-216ENST00000567071 CLEC4DQ8WXI8 215 aa11.35□□□□□ -0.59
CAPN3-216ENST00000567071 EPC1Q9H2F5 836 aa11.35□□□□□ -0.59
CAPN3-216ENST00000567071 KCNK12Q9HB15 430 aa11.35□□□□□ -0.59
CAPN3-216ENST00000567071 DDX19BQ9UMR2 479 aa11.35□□□□□ -0.59
CAPN3-216ENST00000567071 STX8Q9UNK0 236 aa11.35□□□□□ -0.59
CAPN3-216ENST00000567071 LHX6Q9UPM6 363 aa11.35□□□□□ -0.59
CAPN3-216ENST00000567071 MTMR7Q9Y216 660 aa11.35□□□□□ -0.59
CAPN3-216ENST00000567071 HCFC2Q9Y5Z7 792 aa11.35□□□□□ -0.59
CAPN3-216ENST00000567071 PLIN4Q96Q06 1357 aa11.35□□□□□ -0.59
CAPN3-216ENST00000567071 HELZ2Q9BYK8 2649 aaKnown RBP11.35□□□□□ -0.59
CAPN3-216ENST00000567071 KRBA1A5PL33 1030 aa11.34□□□□□ -0.59
CAPN3-216ENST00000567071 SCG2P13521 617 aa11.34□□□□□ -0.59
CAPN3-216ENST00000567071 APOBRQ0VD83 1088 aa11.34□□□□□ -0.59
CAPN3-216ENST00000567071 LPIN1Q14693 890 aa11.34□□□□□ -0.59
CAPN3-216ENST00000567071 ZSCAN25Q6NSZ9 544 aa11.34□□□□□ -0.59
CAPN3-216ENST00000567071 GIMAP6Q6P9H5 292 aa11.34□□□□□ -0.59
CAPN3-216ENST00000567071 KCNV1Q6PIU1 500 aa11.34□□□□□ -0.59
CAPN3-216ENST00000567071 UNQ6494/PRO21346Q6UXR6 183 aa11.34□□□□□ -0.59
CAPN3-216ENST00000567071 TSHZ1Q6ZSZ6 1077 aa11.34□□□□□ -0.59
CAPN3-216ENST00000567071 ERC1Q8IUD2 1116 aa11.34□□□□□ -0.59
CAPN3-216ENST00000567071 SSH3Q8TE77 659 aa11.34□□□□□ -0.59
CAPN3-216ENST00000567071 DCAF4Q8WV16 495 aa11.34□□□□□ -0.59
CAPN3-216ENST00000567071 MRPS27Q92552 414 aaKnown RBP11.34□□□□□ -0.59
CAPN3-216ENST00000567071 EHMT1Q9H9B1 1298 aa11.34□□□□□ -0.59
CAPN3-216ENST00000567071 SPATA6Q9NWH7 488 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-216ENST00000567071 MYH7P12883 1935 aa11.34□□□□□ -0.59
CAPN3-216ENST00000567071 MIA3Q5JRA6 1907 aa11.34□□□□□ -0.59
CAPN3-216ENST00000567071 CCDC171Q6TFL3 1326 aa11.34□□□□□ -0.59
CAPN3-216ENST00000567071 DSPP15924 2871 aaKnown RBP11.34□□□□□ -0.59
CAPN3-216ENST00000567071 TMEM8BA6NDV4 472 aa11.33□□□□□ -0.6
CAPN3-216ENST00000567071 HIDE1A8MVS5 230 aa11.33□□□□□ -0.6
CAPN3-216ENST00000567071 HAX1O00165 279 aa11.33□□□□□ -0.6
CAPN3-216ENST00000567071 EIF3JO75822 258 aaKnown RBP11.33□□□□□ -0.6
CAPN3-216ENST00000567071 CHRNA1P02708 482 aa11.33□□□□□ -0.6
CAPN3-216ENST00000567071 SLC3A2P08195 630 aaKnown RBP11.33□□□□□ -0.6
CAPN3-216ENST00000567071 LAG3P18627 525 aa11.33□□□□□ -0.6
CAPN3-216ENST00000567071 IBSPP21815 317 aaPredicted RBP11.33□□□□□ -0.6
CAPN3-216ENST00000567071 CA8P35219 290 aa11.33□□□□□ -0.6
CAPN3-216ENST00000567071 SLC16A2P36021 539 aa11.33□□□□□ -0.6
CAPN3-216ENST00000567071 TDO2P48775 406 aa11.33□□□□□ -0.6
CAPN3-216ENST00000567071 ARHGAP4P98171 946 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms