RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 NASPP49321 788 aaPredicted RBP12.93□□□□□ -0.34
KARS-207ENST00000566560 JAK3P52333 1124 aa12.93□□□□□ -0.34
KARS-207ENST00000566560 ACTR2P61160 394 aa12.93□□□□□ -0.34
KARS-207ENST00000566560 NKX3-2P78367 333 aa12.93□□□□□ -0.34
KARS-207ENST00000566560 DNM1Q05193 864 aaKnown RBP12.93□□□□□ -0.34
KARS-207ENST00000566560 STK38Q15208 465 aa12.93□□□□□ -0.34
KARS-207ENST00000566560 LRRC41Q15345 812 aa12.93□□□□□ -0.34
KARS-207ENST00000566560 TMEM266Q2M3C6 531 aa12.93□□□□□ -0.34
KARS-207ENST00000566560 ZNF746Q6NUN9 644 aaPredicted RBP12.93□□□□□ -0.34
KARS-207ENST00000566560 ARRDC4Q8NCT1 418 aa12.93□□□□□ -0.34
KARS-207ENST00000566560 KHSRPQ92945 711 aaKnown RBP eCLIP12.93□□□□□ -0.34
KARS-207ENST00000566560 GPR20Q99678 358 aa12.93□□□□□ -0.34
KARS-207ENST00000566560 UNC45AQ9H3U1 944 aa12.93□□□□□ -0.34
KARS-207ENST00000566560 TTC12Q9H892 705 aaPredicted RBP12.93□□□□□ -0.34
KARS-207ENST00000566560 TELO2Q9Y4R8 837 aa12.93□□□□□ -0.34
KARS-207ENST00000566560 SCN10AQ9Y5Y9 1956 aa12.92□□□□□ -0.34
KARS-207ENST00000566560 POTEMA6NI47 508 aa12.92□□□□□ -0.34
KARS-207ENST00000566560 A6NJR5 290 aa12.92□□□□□ -0.34
KARS-207ENST00000566560 KBTBD13C9JR72 458 aa12.92□□□□□ -0.34
KARS-207ENST00000566560 DNM1LO00429 736 aa12.92□□□□□ -0.34
KARS-207ENST00000566560 ZEB2O60315 1214 aa12.92□□□□□ -0.34
KARS-207ENST00000566560 TFRCP02786 760 aaKnown RBP12.92□□□□□ -0.34
KARS-207ENST00000566560 MYL3P08590 195 aa12.92□□□□□ -0.34
KARS-207ENST00000566560 NUDT7P0C024 238 aa12.92□□□□□ -0.34
KARS-207ENST00000566560 ZNF286BP0CG31 522 aa12.92□□□□□ -0.34
KARS-207ENST00000566560 TCF7P36402 384 aaPredicted RBP12.92□□□□□ -0.34
KARS-207ENST00000566560 PRPHP41219 470 aa12.92□□□□□ -0.34
KARS-207ENST00000566560 KRT85P78386 507 aa12.92□□□□□ -0.34
KARS-207ENST00000566560 PPP2R5CQ13362 524 aa12.92□□□□□ -0.34
KARS-207ENST00000566560 PTPAQ15257 358 aa12.92□□□□□ -0.34
KARS-207ENST00000566560 DGKDQ16760 1214 aa12.92□□□□□ -0.34
KARS-207ENST00000566560 GNASQ5JWF2 1037 aa12.92□□□□□ -0.34
KARS-207ENST00000566560 ATL3Q6DD88 541 aa12.92□□□□□ -0.34
KARS-207ENST00000566560 NCAPH2Q6IBW4 605 aa12.92□□□□□ -0.34
KARS-207ENST00000566560 MIER3Q7Z3K6 550 aa12.92□□□□□ -0.34
KARS-207ENST00000566560 SMAP1Q8IYB5 467 aaPredicted RBP12.92□□□□□ -0.34
KARS-207ENST00000566560 C4orf32Q8N8J7 132 aa12.92□□□□□ -0.34
KARS-207ENST00000566560 PCSK9Q8NBP7 692 aaKnown RBP12.92□□□□□ -0.34
KARS-207ENST00000566560 KLHDC9Q8NEP7 349 aa12.92□□□□□ -0.34
KARS-207ENST00000566560 PCDHA12Q9UN75 941 aa12.92□□□□□ -0.34
KARS-207ENST00000566560 SAMM50Q9Y512 469 aa12.92□□□□□ -0.34
KARS-207ENST00000566560 YEATS4O95619 227 aa12.91□□□□□ -0.34
KARS-207ENST00000566560 LGALS2P05162 132 aa12.91□□□□□ -0.34
KARS-207ENST00000566560 SUPT20HL2P0C7V6 817 aa12.91□□□□□ -0.34
KARS-207ENST00000566560 HOXD8P13378 290 aaPredicted RBP12.91□□□□□ -0.34
KARS-207ENST00000566560 HOXB1P14653 301 aaPredicted RBP12.91□□□□□ -0.34
KARS-207ENST00000566560 SFNP31947 248 aa12.91□□□□□ -0.34
KARS-207ENST00000566560 SPIRE1Q08AE8 756 aa12.91□□□□□ -0.34
KARS-207ENST00000566560 ARL6IP4Q66PJ3 421 aaKnown RBP12.91□□□□□ -0.34
KARS-207ENST00000566560 MIS18BP1Q6P0N0 1132 aa12.91□□□□□ -0.34
KARS-207ENST00000566560 B3GNT9Q6UX72 402 aa12.91□□□□□ -0.34
KARS-207ENST00000566560 TRIM50Q86XT4 487 aa12.91□□□□□ -0.34
KARS-207ENST00000566560 RDM1Q8NG50 284 aa12.91□□□□□ -0.34
KARS-207ENST00000566560 SEPT1Q8WYJ6 367 aa12.91□□□□□ -0.34
KARS-207ENST00000566560 CHAMP1Q96JM3 812 aa12.91□□□□□ -0.34
KARS-207ENST00000566560 RAB34Q9BZG1 259 aa12.91□□□□□ -0.34
KARS-207ENST00000566560 DISC1Q9NRI5 854 aa12.91□□□□□ -0.34
KARS-207ENST00000566560 TFIP11Q9UBB9 837 aaKnown RBP12.91□□□□□ -0.34
KARS-207ENST00000566560 CFAP45Q9UL16 551 aa12.91□□□□□ -0.34
KARS-207ENST00000566560 EMSYQ7Z589 1322 aa12.9□□□□□ -0.34
KARS-207ENST00000566560 GSTTP1A0A1W2PQM5 241 aa12.9□□□□□ -0.34
KARS-207ENST00000566560 VWA3AA6NCI4 1184 aa12.9□□□□□ -0.34
KARS-207ENST00000566560 GRXCR2A6NFK2 248 aa12.9□□□□□ -0.34
KARS-207ENST00000566560 MOXD2PA6NHM9 499 aa12.9□□□□□ -0.34
KARS-207ENST00000566560 BACH1O14867 736 aa12.9□□□□□ -0.34
KARS-207ENST00000566560 ASGR1P07306 291 aa12.9□□□□□ -0.34
KARS-207ENST00000566560 PSAPP07602 524 aa12.9□□□□□ -0.34
KARS-207ENST00000566560 MARCKSP29966 332 aaPredicted RBP12.9□□□□□ -0.34
KARS-207ENST00000566560 TECP42680 631 aa12.9□□□□□ -0.34
KARS-207ENST00000566560 SOX10P56693 466 aa12.9□□□□□ -0.34
KARS-207ENST00000566560 PURAQ00577 322 aaKnown RBP12.9□□□□□ -0.34
KARS-207ENST00000566560 SLC39A14Q15043 492 aa12.9□□□□□ -0.34
KARS-207ENST00000566560 KCNA10Q16322 511 aa12.9□□□□□ -0.34
KARS-207ENST00000566560 UTP14CQ5TAP6 766 aaKnown RBP12.9□□□□□ -0.34
KARS-207ENST00000566560 CCSAPQ6IQ19 270 aaPredicted RBP12.9□□□□□ -0.34
KARS-207ENST00000566560 CXCL17Q6UXB2 119 aa12.9□□□□□ -0.34
KARS-207ENST00000566560 DTHD1Q6ZMT9 781 aa12.9□□□□□ -0.34
KARS-207ENST00000566560 CCDC60Q8IWA6 550 aaPredicted RBP12.9□□□□□ -0.34
KARS-207ENST00000566560 ANKLE1Q8NAG6 615 aa12.9□□□□□ -0.34
KARS-207ENST00000566560 LINC00301Q8NCQ3 95 aa12.9□□□□□ -0.34
KARS-207ENST00000566560 DDX12PQ92771 950 aa12.9□□□□□ -0.34
KARS-207ENST00000566560 TSEN34Q9BSV6 310 aaKnown RBP12.9□□□□□ -0.34
KARS-207ENST00000566560 AZI2Q9H6S1 392 aa12.9□□□□□ -0.34
KARS-207ENST00000566560 ZNF215Q9UL58 517 aaPredicted RBP12.9□□□□□ -0.34
KARS-207ENST00000566560 PCDHA10Q9Y5I2 948 aa12.9□□□□□ -0.34
KARS-207ENST00000566560 IGSF9BQ9UPX0 1349 aa12.89□□□□□ -0.35
KARS-207ENST00000566560 A0A1W2PQ45 241 aaPredicted RBP12.89□□□□□ -0.35
KARS-207ENST00000566560 A0A1W2PQY0 241 aa12.89□□□□□ -0.35
KARS-207ENST00000566560 CCDC85CA6NKD9 419 aa12.89□□□□□ -0.35
KARS-207ENST00000566560 EML1O00423 815 aa12.89□□□□□ -0.35
KARS-207ENST00000566560 SPTLC2O15270 562 aa12.89□□□□□ -0.35
KARS-207ENST00000566560 KPNA6O60684 536 aa12.89□□□□□ -0.35
KARS-207ENST00000566560 PPFIA4O75335 1185 aa12.89□□□□□ -0.35
KARS-207ENST00000566560 LGR5O75473 907 aa12.89□□□□□ -0.35
KARS-207ENST00000566560 F2P00734 622 aa12.89□□□□□ -0.35
KARS-207ENST00000566560 CAPN2P17655 700 aa12.89□□□□□ -0.35
KARS-207ENST00000566560 ACLYP53396 1101 aa12.89□□□□□ -0.35
KARS-207ENST00000566560 IL17AQ16552 155 aa12.89□□□□□ -0.35
KARS-207ENST00000566560 FAM160B1Q5W0V3 765 aa12.89□□□□□ -0.35
KARS-207ENST00000566560 HAUS3Q68CZ6 603 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms