RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 TIPINQ9BVW5 301 aa9.86□□□□□ -0.83
LSM3P5-201ENST00000566307 SPATC1LQ9H0A9 340 aa9.86□□□□□ -0.83
LSM3P5-201ENST00000566307 KCNF1Q9H3M0 494 aa9.86□□□□□ -0.83
LSM3P5-201ENST00000566307 UNC45AQ9H3U1 944 aa9.86□□□□□ -0.83
LSM3P5-201ENST00000566307 OLFML3Q9NRN5 406 aa9.86□□□□□ -0.83
LSM3P5-201ENST00000566307 KCND1Q9NSA2 647 aa9.86□□□□□ -0.83
LSM3P5-201ENST00000566307 HOMER2Q9NSB8 354 aa9.86□□□□□ -0.83
LSM3P5-201ENST00000566307 SAMSN1Q9NSI8 373 aaKnown RBP9.86□□□□□ -0.83
LSM3P5-201ENST00000566307 PANK4Q9NVE7 773 aa9.86□□□□□ -0.83
LSM3P5-201ENST00000566307 SEL1LQ9UBV2 794 aa9.86□□□□□ -0.83
LSM3P5-201ENST00000566307 DBR1Q9UK59 544 aaKnown RBP9.86□□□□□ -0.83
LSM3P5-201ENST00000566307 ODF2LQ9ULJ1 636 aa9.86□□□□□ -0.83
LSM3P5-201ENST00000566307 B4DLN1 442 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 DKC1O60832 514 aaKnown RBP eCLIP9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 CNMDO75829 334 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 EIF2AK2P19525 551 aaKnown RBP9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 PTGS1P23219 599 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 EDNRBP24530 442 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 GUCY2CP25092 1073 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 ZNF131P52739 623 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 HERVK_113P62684 666 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 TBX2Q13207 712 aaPredicted RBP9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 ITGB3BPQ13352 177 aaPredicted RBP9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 GIT2Q14161 759 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 TTLL12Q14166 644 aaPredicted RBP9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 TPD52L1Q16890 204 aaPredicted RBP9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 BMT2Q1RMZ1 405 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 CCDC144BQ3MJ40 725 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 GNPTABQ3T906 1256 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 EAPPQ56P03 285 aaPredicted RBP9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 ARSHQ5FYA8 562 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 TCP11X2Q5H9J9 407 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 GPAT2Q6NUI2 795 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 GADL1Q6ZQY3 521 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 MIER3Q7Z3K6 550 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 LRRC8AQ8IWT6 810 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 ZC3H3Q8IXZ2 948 aaKnown RBP9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 C4orf19Q8IY42 314 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 SMAP1Q8IYB5 467 aaPredicted RBP9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 SPC24Q8NBT2 197 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 KIAA1524Q8TCG1 905 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 OPTNQ96CV9 577 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 NAP1L5Q96NT1 182 aaPredicted RBP9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 DUSP9Q99956 384 aaKnown RBP9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 ASCC2Q9H1I8 757 aaPredicted RBP9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 ZSWIM4Q9H7M6 989 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 SCUBE2Q9NQ36 999 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 INTS13Q9NVM9 706 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 BTBD7Q9P203 1132 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 PNMA3Q9UL41 463 aa9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 COLQQ9Y215 455 aaPredicted RBP9.85□□□□□ -0.83
LSM3P5-201ENST00000566307 UBE4BO95155 1302 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 A0A1W2PQC6 194 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 WDR64B1ANS9 1081 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 SPATA31C2B4DYI2 1134 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 KCNJ18B7U540 433 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 NRDCO43847 1150 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 EIF3JO75822 258 aaKnown RBP9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 CETPP11597 493 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 FCER1AP12319 257 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 STX17P56962 302 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 PSMC6P62333 389 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 UBXN2AP68543 259 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 TRIM14Q14142 442 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 KCNJ12Q14500 433 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 NFIL3Q16649 462 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 EDRF1Q3B7T1 1238 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 ZCWPW2Q504Y3 356 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 LCE2DQ5TA82 110 aaPredicted RBP9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 SPECC1LQ69YQ0 1117 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 RINT1Q6NUQ1 792 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 DLK2Q6UY11 383 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 C1orf186Q6ZWK4 172 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 EPM2AIP1Q7L775 607 aaPredicted RBP9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 DYMQ7RTS9 669 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 IRF2BP1Q8IU81 584 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 MYOCDQ8IZQ8 938 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 CCDC112Q8NEF3 446 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 IQCDQ96DY2 449 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 SLC10A4Q96EP9 437 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 DYDC2Q96IM9 177 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 TRIM47Q96LD4 638 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 CEP63Q96MT8 703 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 MROH8Q9H579 483 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 RRAGDQ9NQL2 400 aaPredicted RBP9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 SPTLC3Q9NUV7 552 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 TCEAL9Q9UHQ7 104 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 NRBP1Q9UHY1 535 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 COL4A3BPQ9Y5P4 624 aa9.84□□□□□ -0.83
LSM3P5-201ENST00000566307 EIF3DO15371 548 aaKnown RBP eCLIP9.83□□□□□ -0.84
LSM3P5-201ENST00000566307 RGS20O76081 388 aa9.83□□□□□ -0.84
LSM3P5-201ENST00000566307 ZBTB48P10074 688 aaPredicted RBP9.83□□□□□ -0.84
LSM3P5-201ENST00000566307 MAPTP10636 758 aaKnown RBP9.83□□□□□ -0.84
LSM3P5-201ENST00000566307 IDEP14735 1019 aa9.83□□□□□ -0.84
LSM3P5-201ENST00000566307 KCNA2P16389 499 aa9.83□□□□□ -0.84
LSM3P5-201ENST00000566307 SFPQP23246 707 aaKnown RBP eCLIP9.83□□□□□ -0.84
LSM3P5-201ENST00000566307 QARSP47897 775 aaKnown RBP9.83□□□□□ -0.84
LSM3P5-201ENST00000566307 GTF2A2P52657 109 aa9.83□□□□□ -0.84
LSM3P5-201ENST00000566307 COPB1P53618 953 aaKnown RBP9.83□□□□□ -0.84
LSM3P5-201ENST00000566307 PMS1P54277 932 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms