RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 SHC4Q6S5L8 630 aa16.6■□□□□ 0.25
SPG7-213ENST00000566221 CABP7Q86V35 215 aa16.6■□□□□ 0.25
SPG7-213ENST00000566221 ATP6V0A1Q93050 837 aa16.6■□□□□ 0.25
SPG7-213ENST00000566221 POLR3CQ9BUI4 534 aaPredicted RBP16.6■□□□□ 0.25
SPG7-213ENST00000566221 AZI2Q9H6S1 392 aa16.6■□□□□ 0.25
SPG7-213ENST00000566221 TUFT1Q9NNX1 390 aa16.6■□□□□ 0.25
SPG7-213ENST00000566221 TELO2Q9Y4R8 837 aa16.6■□□□□ 0.25
SPG7-213ENST00000566221 IGSF9BQ9UPX0 1349 aa16.6■□□□□ 0.25
SPG7-213ENST00000566221 IGKV6D-21A0A0A0MT36 114 aa16.59■□□□□ 0.25
SPG7-213ENST00000566221 CTAGE5O15320 804 aa16.59■□□□□ 0.25
SPG7-213ENST00000566221 ZEB2O60315 1214 aa16.59■□□□□ 0.25
SPG7-213ENST00000566221 DKC1O60832 514 aaKnown RBP eCLIP16.59■□□□□ 0.255e-6■□□□□ 9.1
SPG7-213ENST00000566221 PPFIA4O75335 1185 aa16.59■□□□□ 0.25
SPG7-213ENST00000566221 LGR5O75473 907 aa16.59■□□□□ 0.25
SPG7-213ENST00000566221 MYCP01106 439 aaPredicted RBP16.59■□□□□ 0.25
SPG7-213ENST00000566221 P4HBP07237 508 aaKnown RBP16.59■□□□□ 0.25
SPG7-213ENST00000566221 MUTP22033 750 aa16.59■□□□□ 0.25
SPG7-213ENST00000566221 CMA1P23946 247 aa16.59■□□□□ 0.25
SPG7-213ENST00000566221 RPA1P27694 616 aa16.59■□□□□ 0.25
SPG7-213ENST00000566221 CDC25AP30304 524 aa16.59■□□□□ 0.25
SPG7-213ENST00000566221 CCT6AP40227 531 aaKnown RBP16.59■□□□□ 0.25
SPG7-213ENST00000566221 NFKBIBQ15653 356 aa16.59■□□□□ 0.25
SPG7-213ENST00000566221 RNF180Q86T96 592 aa16.59■□□□□ 0.25
SPG7-213ENST00000566221 CCDC60Q8IWA6 550 aaPredicted RBP16.59■□□□□ 0.25
SPG7-213ENST00000566221 AFAP1L1Q8TED9 768 aa16.59■□□□□ 0.25
SPG7-213ENST00000566221 MRPS27Q92552 414 aaKnown RBP16.59■□□□□ 0.25
SPG7-213ENST00000566221 DYDC2Q96IM9 177 aa16.59■□□□□ 0.25
SPG7-213ENST00000566221 EPSTI1Q96J88 318 aa16.59■□□□□ 0.25
SPG7-213ENST00000566221 CDK5RAP3Q96JB5 506 aa16.59■□□□□ 0.25
SPG7-213ENST00000566221 LXNQ9BS40 222 aa16.59■□□□□ 0.25
SPG7-213ENST00000566221 MMTAG2Q9BU76 263 aaKnown RBP16.59■□□□□ 0.25
SPG7-213ENST00000566221 CCSER1Q9C0I3 900 aa16.59■□□□□ 0.25
SPG7-213ENST00000566221 ZNF302Q9NR11 478 aa16.59■□□□□ 0.25
SPG7-213ENST00000566221 FAM13BQ9NYF5 915 aa16.59■□□□□ 0.25
SPG7-213ENST00000566221 MYH11P35749 1972 aa16.58■□□□□ 0.25
SPG7-213ENST00000566221 MYADML2A6NDP7 307 aa16.58■□□□□ 0.24
SPG7-213ENST00000566221 KPNA6O60684 536 aa16.58■□□□□ 0.24
SPG7-213ENST00000566221 PRPF40AO75400 957 aaKnown RBP16.58■□□□□ 0.24
SPG7-213ENST00000566221 LGALS2P05162 132 aa16.58■□□□□ 0.24
SPG7-213ENST00000566221 QARSP47897 775 aaKnown RBP16.58■□□□□ 0.24
SPG7-213ENST00000566221 PSMC5P62195 406 aa16.58■□□□□ 0.24
SPG7-213ENST00000566221 UBE2HP62256 183 aa16.58■□□□□ 0.24
SPG7-213ENST00000566221 BEX3Q00994 111 aa16.58■□□□□ 0.24
SPG7-213ENST00000566221 CYP4A11Q02928 519 aa16.58■□□□□ 0.24
SPG7-213ENST00000566221 GNASQ5JWF2 1037 aa16.58■□□□□ 0.24
SPG7-213ENST00000566221 HYIQ5T013 277 aa16.58■□□□□ 0.24
SPG7-213ENST00000566221 SWSAP1Q6NVH7 229 aa16.58■□□□□ 0.24
SPG7-213ENST00000566221 USP49Q70CQ1 688 aa16.58■□□□□ 0.24
SPG7-213ENST00000566221 PCSK9Q8NBP7 692 aaKnown RBP16.58■□□□□ 0.24
SPG7-213ENST00000566221 BANK1Q8NDB2 785 aa16.58■□□□□ 0.24
SPG7-213ENST00000566221 RASSF8Q8NHQ8 419 aa16.58■□□□□ 0.24
SPG7-213ENST00000566221 CALML4Q96GE6 196 aa16.58■□□□□ 0.24
SPG7-213ENST00000566221 DEFB118Q96PH6 123 aa16.58■□□□□ 0.24
SPG7-213ENST00000566221 HSD17B14Q9BPX1 270 aa16.58■□□□□ 0.24
SPG7-213ENST00000566221 NT5C3AQ9H0P0 336 aa16.58■□□□□ 0.24
SPG7-213ENST00000566221 SMARCAD1Q9H4L7 1026 aa16.58■□□□□ 0.24
SPG7-213ENST00000566221 GABBR1Q9UBS5 961 aa16.58■□□□□ 0.24
SPG7-213ENST00000566221 CCDC39Q9UFE4 941 aa16.58■□□□□ 0.24
SPG7-213ENST00000566221 ZNF215Q9UL58 517 aaPredicted RBP16.58■□□□□ 0.24
SPG7-213ENST00000566221 TRIP12Q14669 1992 aaPredicted RBP16.57■□□□□ 0.24
SPG7-213ENST00000566221 POTEB3A0JP26 581 aa16.57■□□□□ 0.24
SPG7-213ENST00000566221 MED24O75448 989 aa16.57■□□□□ 0.24
SPG7-213ENST00000566221 ZNF286BP0CG31 522 aa16.57■□□□□ 0.24
SPG7-213ENST00000566221 SPATA31C1P0DKV0 1188 aa16.57■□□□□ 0.24
SPG7-213ENST00000566221 SLC26A2P50443 739 aa16.57■□□□□ 0.24
SPG7-213ENST00000566221 STAT5BP51692 787 aa16.57■□□□□ 0.24
SPG7-213ENST00000566221 LRRC41Q15345 812 aa16.57■□□□□ 0.24
SPG7-213ENST00000566221 UGCGQ16739 394 aa16.57■□□□□ 0.24
SPG7-213ENST00000566221 UTP14CQ5TAP6 766 aaKnown RBP16.57■□□□□ 0.24
SPG7-213ENST00000566221 PDXDC2PQ6P474 469 aa16.57■□□□□ 0.24
SPG7-213ENST00000566221 POTEBQ6S5H4 581 aa16.57■□□□□ 0.24
SPG7-213ENST00000566221 PLPPR4Q7Z2D5 763 aa16.57■□□□□ 0.24
SPG7-213ENST00000566221 CATSPER3Q86XQ3 398 aa16.57■□□□□ 0.24
SPG7-213ENST00000566221 TRIM50Q86XT4 487 aa16.57■□□□□ 0.24
SPG7-213ENST00000566221 TPH2Q8IWU9 490 aa16.57■□□□□ 0.24
SPG7-213ENST00000566221 KCTD17Q8N5Z5 321 aa16.57■□□□□ 0.24
SPG7-213ENST00000566221 FSIP1Q8NA03 581 aa16.57■□□□□ 0.24
SPG7-213ENST00000566221 ARRDC4Q8NCT1 418 aa16.57■□□□□ 0.24
SPG7-213ENST00000566221 KLHDC9Q8NEP7 349 aa16.57■□□□□ 0.24
SPG7-213ENST00000566221 GLG1Q92896 1179 aa16.57■□□□□ 0.24
SPG7-213ENST00000566221 PCYT2Q99447 389 aa16.57■□□□□ 0.24
SPG7-213ENST00000566221 PYM1Q9BRP8 204 aaKnown RBP16.57■□□□□ 0.24
SPG7-213ENST00000566221 ZSWIM4Q9H7M6 989 aa16.57■□□□□ 0.24
SPG7-213ENST00000566221 RGL1Q9NZL6 768 aa16.57■□□□□ 0.24
SPG7-213ENST00000566221 MAFBQ9Y5Q3 323 aaPredicted RBP16.57■□□□□ 0.24
SPG7-213ENST00000566221 FAM237AA0A1B0GTK4 181 aa16.56■□□□□ 0.24
SPG7-213ENST00000566221 KBTBD13C9JR72 458 aa16.56■□□□□ 0.24
SPG7-213ENST00000566221 SLITRK3O94933 977 aa16.56■□□□□ 0.24
SPG7-213ENST00000566221 LYPLA2O95372 231 aa16.56■□□□□ 0.24
SPG7-213ENST00000566221 F2P00734 622 aa16.56■□□□□ 0.24
SPG7-213ENST00000566221 GJB1P08034 283 aa16.56■□□□□ 0.24
SPG7-213ENST00000566221 MYL3P08590 195 aa16.56■□□□□ 0.24
SPG7-213ENST00000566221 PFKFB1P16118 471 aa16.56■□□□□ 0.24
SPG7-213ENST00000566221 FXR1P51114 621 aaKnown RBP eCLIP16.56■□□□□ 0.24
SPG7-213ENST00000566221 IRX5P78411 483 aaPredicted RBP16.56■□□□□ 0.24
SPG7-213ENST00000566221 PURAQ00577 322 aaKnown RBP16.56■□□□□ 0.24
SPG7-213ENST00000566221 PRKCEQ02156 737 aa16.56■□□□□ 0.24
SPG7-213ENST00000566221 GRB10Q13322 594 aa16.56■□□□□ 0.24
SPG7-213ENST00000566221 CTTNQ14247 550 aaKnown RBP16.56■□□□□ 0.24
SPG7-213ENST00000566221 KARSQ15046 597 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms