RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 NFASCO94856 1347 aa15.49■□□□□ 0.07
VPS9D1-204ENST00000565023 BACH1O14867 736 aa15.49■□□□□ 0.07
VPS9D1-204ENST00000565023 DEXIO95424 95 aa15.49■□□□□ 0.07
VPS9D1-204ENST00000565023 CA3P07451 260 aa15.49■□□□□ 0.07
VPS9D1-204ENST00000565023 HOXC8P31273 242 aa15.49■□□□□ 0.07
VPS9D1-204ENST00000565023 AK2P54819 239 aa15.49■□□□□ 0.07
VPS9D1-204ENST00000565023 WDR5P61964 334 aaKnown RBP15.49■□□□□ 0.07
VPS9D1-204ENST00000565023 GRIK4Q16099 956 aa15.49■□□□□ 0.07
VPS9D1-204ENST00000565023 PRR16Q569H4 304 aa15.49■□□□□ 0.07
VPS9D1-204ENST00000565023 RUFY4Q6ZNE9 571 aa15.49■□□□□ 0.07
VPS9D1-204ENST00000565023 TRMT1LQ7Z2T5 733 aaKnown RBP15.49■□□□□ 0.07
VPS9D1-204ENST00000565023 TRAPPC12Q8WVT3 735 aa15.49■□□□□ 0.07
VPS9D1-204ENST00000565023 KIF2CQ99661 725 aa15.49■□□□□ 0.07
VPS9D1-204ENST00000565023 ZNF577Q9BSK1 485 aa15.49■□□□□ 0.07
VPS9D1-204ENST00000565023 ZBED2Q9BTP6 218 aa15.49■□□□□ 0.07
VPS9D1-204ENST00000565023 OSBPL7Q9BZF2 842 aa15.49■□□□□ 0.07
VPS9D1-204ENST00000565023 PRDM6Q9NQX0 595 aa15.49■□□□□ 0.07
VPS9D1-204ENST00000565023 TPCN1Q9ULQ1 816 aa15.49■□□□□ 0.07
VPS9D1-204ENST00000565023 PCDHA11Q9Y5I1 949 aa15.49■□□□□ 0.07
VPS9D1-204ENST00000565023 MICAL3Q7RTP6 2002 aa15.49■□□□□ 0.07
VPS9D1-204ENST00000565023 LOXHD1Q8IVV2 1947 aa15.49■□□□□ 0.07
VPS9D1-204ENST00000565023 EMSYQ7Z589 1322 aa15.48■□□□□ 0.07
VPS9D1-204ENST00000565023 NRCAMQ92823 1304 aa15.48■□□□□ 0.07
VPS9D1-204ENST00000565023 IGLV3-22A0A075B6J6 115 aa15.48■□□□□ 0.07
VPS9D1-204ENST00000565023 LGR5O75473 907 aa15.48■□□□□ 0.07
VPS9D1-204ENST00000565023 BAIAP3O94812 1187 aa15.48■□□□□ 0.07
VPS9D1-204ENST00000565023 PARNO95453 639 aaKnown RBP15.48■□□□□ 0.07
VPS9D1-204ENST00000565023 CXCL10P02778 98 aa15.48■□□□□ 0.07
VPS9D1-204ENST00000565023 INSRRP14616 1297 aa15.48■□□□□ 0.07
VPS9D1-204ENST00000565023 IGFBP4P22692 258 aa15.48■□□□□ 0.07
VPS9D1-204ENST00000565023 STAT5BP51692 787 aa15.48■□□□□ 0.07
VPS9D1-204ENST00000565023 IKBKEQ14164 716 aa15.48■□□□□ 0.07
VPS9D1-204ENST00000565023 MCTP2Q6DN12 878 aa15.48■□□□□ 0.07
VPS9D1-204ENST00000565023 HERC6Q8IVU3 1022 aa15.48■□□□□ 0.07
VPS9D1-204ENST00000565023 TEX2Q8IWB9 1127 aa15.48■□□□□ 0.07
VPS9D1-204ENST00000565023 DBF4BQ8NFT6 615 aa15.48■□□□□ 0.07
VPS9D1-204ENST00000565023 GAS2L1Q99501 681 aaPredicted RBP15.48■□□□□ 0.07
VPS9D1-204ENST00000565023 FAM49AQ9H0Q0 323 aaPredicted RBP15.48■□□□□ 0.07
VPS9D1-204ENST00000565023 TCEAL9Q9UHQ7 104 aa15.48■□□□□ 0.07
VPS9D1-204ENST00000565023 TUBE1Q9UJT0 475 aa15.48■□□□□ 0.07
VPS9D1-204ENST00000565023 KCNJ14Q9UNX9 436 aa15.48■□□□□ 0.07
VPS9D1-204ENST00000565023 SIP14410 1827 aa15.47■□□□□ 0.07
VPS9D1-204ENST00000565023 WDR81Q562E7 1941 aa15.47■□□□□ 0.07
VPS9D1-204ENST00000565023 KIF28PB7ZC32 967 aa15.47■□□□□ 0.07
VPS9D1-204ENST00000565023 IPO5O00410 1097 aaKnown RBP15.47■□□□□ 0.07
VPS9D1-204ENST00000565023 TLL1O43897 1013 aa15.47■□□□□ 0.07
VPS9D1-204ENST00000565023 CCNE2O96020 404 aa15.47■□□□□ 0.07
VPS9D1-204ENST00000565023 CYP3A4P08684 503 aa15.47■□□□□ 0.07
VPS9D1-204ENST00000565023 NEK4P51957 841 aa15.47■□□□□ 0.07
VPS9D1-204ENST00000565023 FOSBP53539 338 aa15.47■□□□□ 0.07
VPS9D1-204ENST00000565023 ADAM17P78536 824 aa15.47■□□□□ 0.07
VPS9D1-204ENST00000565023 PLCB4Q15147 1175 aa15.47■□□□□ 0.07
VPS9D1-204ENST00000565023 ANKRD1Q15327 319 aa15.47■□□□□ 0.07
VPS9D1-204ENST00000565023 NIPA1Q7RTP0 329 aa15.47■□□□□ 0.07
VPS9D1-204ENST00000565023 NECAB1Q8N987 351 aa15.47■□□□□ 0.07
VPS9D1-204ENST00000565023 DNAJB3Q8WWF6 145 aa15.47■□□□□ 0.07
VPS9D1-204ENST00000565023 CRYGNQ8WXF5 182 aa15.47■□□□□ 0.07
VPS9D1-204ENST00000565023 EVPLQ92817 2033 aa15.47■□□□□ 0.07
VPS9D1-204ENST00000565023 UPF2Q9HAU5 1272 aaKnown RBP15.47■□□□□ 0.07
VPS9D1-204ENST00000565023 SH3GLB2Q9NR46 395 aa15.47■□□□□ 0.07
VPS9D1-204ENST00000565023 PCDHA4Q9UN74 947 aa15.47■□□□□ 0.07
VPS9D1-204ENST00000565023 SETQ01105 290 aaPredicted RBP15.46■□□□□ 0.07
VPS9D1-204ENST00000565023 TMEM62Q0P6H9 643 aa15.46■□□□□ 0.07
VPS9D1-204ENST00000565023 SWSAP1Q6NVH7 229 aa15.46■□□□□ 0.07
VPS9D1-204ENST00000565023 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.46■□□□□ 0.07
VPS9D1-204ENST00000565023 CCDC60Q8IWA6 550 aaPredicted RBP15.46■□□□□ 0.07
VPS9D1-204ENST00000565023 CKAP2LQ8IYA6 745 aa15.46■□□□□ 0.07
VPS9D1-204ENST00000565023 BLIDQ8IZY5 108 aa15.46■□□□□ 0.07
VPS9D1-204ENST00000565023 PHOSPHO2Q8TCD6 241 aa15.46■□□□□ 0.07
VPS9D1-204ENST00000565023 TBCKQ8TEA7 893 aa15.46■□□□□ 0.07
VPS9D1-204ENST00000565023 GJA10Q969M2 543 aa15.46■□□□□ 0.07
VPS9D1-204ENST00000565023 BACH2Q9BYV9 841 aa15.46■□□□□ 0.07
VPS9D1-204ENST00000565023 ZNF302Q9NR11 478 aa15.46■□□□□ 0.07
VPS9D1-204ENST00000565023 GJB4Q9NTQ9 266 aa15.46■□□□□ 0.07
VPS9D1-204ENST00000565023 SAMM50Q9Y512 469 aa15.46■□□□□ 0.07
VPS9D1-204ENST00000565023 ABHD14A-ACY1A0A1B0GW23 586 aa15.45■□□□□ 0.06
VPS9D1-204ENST00000565023 LCHNA4D1U4 455 aa15.45■□□□□ 0.06
VPS9D1-204ENST00000565023 RFXAPO00287 272 aa15.45■□□□□ 0.06
VPS9D1-204ENST00000565023 DHX15O43143 795 aaKnown RBP15.45■□□□□ 0.06
VPS9D1-204ENST00000565023 CHMP2AO43633 222 aa15.45■□□□□ 0.06
VPS9D1-204ENST00000565023 PFKFB2O60825 505 aa15.45■□□□□ 0.06
VPS9D1-204ENST00000565023 CDKL5O76039 1030 aa15.45■□□□□ 0.06
VPS9D1-204ENST00000565023 ARHGEF15O94989 841 aa15.45■□□□□ 0.06
VPS9D1-204ENST00000565023 LARGE1O95461 756 aa15.45■□□□□ 0.06
VPS9D1-204ENST00000565023 GHRP10912 638 aa15.45■□□□□ 0.06
VPS9D1-204ENST00000565023 CCDC85BQ15834 202 aaPredicted RBP15.45■□□□□ 0.06
VPS9D1-204ENST00000565023 FAM160B1Q5W0V3 765 aa15.45■□□□□ 0.06
VPS9D1-204ENST00000565023 MIS18BP1Q6P0N0 1132 aa15.45■□□□□ 0.06
VPS9D1-204ENST00000565023 PDXDC2PQ6P474 469 aa15.45■□□□□ 0.06
VPS9D1-204ENST00000565023 RSPH3Q86UC2 560 aa15.45■□□□□ 0.06
VPS9D1-204ENST00000565023 MYOCDQ8IZQ8 938 aa15.45■□□□□ 0.06
VPS9D1-204ENST00000565023 MICALL1Q8N3F8 863 aa15.45■□□□□ 0.06
VPS9D1-204ENST00000565023 SEPT8Q92599 483 aa15.45■□□□□ 0.06
VPS9D1-204ENST00000565023 POTEB3A0JP26 581 aa15.44■□□□□ 0.06
VPS9D1-204ENST00000565023 RRN3P2A6NIE6 340 aa15.44■□□□□ 0.06
VPS9D1-204ENST00000565023 UPP2O95045 317 aa15.44■□□□□ 0.06
VPS9D1-204ENST00000565023 ATG7O95352 703 aa15.44■□□□□ 0.06
VPS9D1-204ENST00000565023 TDP2O95551 362 aa15.44■□□□□ 0.06
VPS9D1-204ENST00000565023 ADGRE1Q14246 886 aa15.44■□□□□ 0.06
VPS9D1-204ENST00000565023 ME3Q16798 604 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms