RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 CCDC38Q502W7 563 aa22.4■■□□□ 1.18
MAP1LC3B-206ENST00000564844 KRT25Q7Z3Z0 450 aa22.4■■□□□ 1.18
MAP1LC3B-206ENST00000564844 KSR1Q8IVT5 923 aa22.4■■□□□ 1.18
MAP1LC3B-206ENST00000564844 MREGQ8N565 214 aa22.4■■□□□ 1.18
MAP1LC3B-206ENST00000564844 RUBCNQ92622 972 aa22.4■■□□□ 1.18
MAP1LC3B-206ENST00000564844 SGSM3Q96HU1 749 aa22.4■■□□□ 1.18
MAP1LC3B-206ENST00000564844 BCS1LQ9Y276 419 aa22.4■■□□□ 1.18
MAP1LC3B-206ENST00000564844 PCDHGC5Q9Y5F6 944 aa22.4■■□□□ 1.18
MAP1LC3B-206ENST00000564844 KRT18P05783 430 aaKnown RBP22.4■■□□□ 1.18
MAP1LC3B-206ENST00000564844 HIBADHP31937 336 aaKnown RBP22.4■■□□□ 1.18
MAP1LC3B-206ENST00000564844 FAM26FQ5R3K3 315 aa22.4■■□□□ 1.18
MAP1LC3B-206ENST00000564844 LRRC45Q96CN5 670 aa22.4■■□□□ 1.18
MAP1LC3B-206ENST00000564844 ATP8A2Q9NTI2 1148 aa22.4■■□□□ 1.18
MAP1LC3B-206ENST00000564844 ALS2Q96Q42 1657 aa22.4■■□□□ 1.18
MAP1LC3B-206ENST00000564844 KCNH2Q12809 1159 aa22.39■■□□□ 1.18
MAP1LC3B-206ENST00000564844 DNAJC5Q9H3Z4 198 aa22.39■■□□□ 1.18
MAP1LC3B-206ENST00000564844 MLXIPLQ9NP71 852 aa22.39■■□□□ 1.18
MAP1LC3B-206ENST00000564844 CCDC87Q9NVE4 849 aa22.39■■□□□ 1.18
MAP1LC3B-206ENST00000564844 RNF14Q9UBS8 474 aa22.39■■□□□ 1.18
MAP1LC3B-206ENST00000564844 CHORDC1Q9UHD1 332 aaPredicted RBP22.39■■□□□ 1.18
MAP1LC3B-206ENST00000564844 KCNQ2O43526 872 aa22.39■■□□□ 1.17
MAP1LC3B-206ENST00000564844 ALKBH5Q6P6C2 394 aaKnown RBP22.39■■□□□ 1.17
MAP1LC3B-206ENST00000564844 TAX1BP1Q86VP1 789 aa22.39■■□□□ 1.17
MAP1LC3B-206ENST00000564844 DGKHQ86XP1 1220 aa22.39■■□□□ 1.17
MAP1LC3B-206ENST00000564844 MGARPQ8TDB4 240 aa22.39■■□□□ 1.17
MAP1LC3B-206ENST00000564844 RAD54LQ92698 747 aa22.39■■□□□ 1.17
MAP1LC3B-206ENST00000564844 ELAC2Q9BQ52 826 aaKnown RBP22.39■■□□□ 1.17
MAP1LC3B-206ENST00000564844 ZMYND12Q9H0C1 365 aa22.39■■□□□ 1.17
MAP1LC3B-206ENST00000564844 IKZF4Q9H2S9 585 aa22.39■■□□□ 1.17
MAP1LC3B-206ENST00000564844 SEPT11Q9NVA2 429 aaKnown RBP22.39■■□□□ 1.17
MAP1LC3B-206ENST00000564844 COL5A2P05997 1499 aaPredicted RBP22.39■■□□□ 1.17
MAP1LC3B-206ENST00000564844 BCORQ6W2J9 1755 aa22.39■■□□□ 1.17
MAP1LC3B-206ENST00000564844 USP17L5A8MUK1 530 aa22.39■■□□□ 1.17
MAP1LC3B-206ENST00000564844 LAD1O00515 517 aa22.39■■□□□ 1.17
MAP1LC3B-206ENST00000564844 EZRP15311 586 aaKnown RBP22.39■■□□□ 1.17
MAP1LC3B-206ENST00000564844 LRRC63Q05C16 580 aa22.39■■□□□ 1.17
MAP1LC3B-206ENST00000564844 RPAINQ86UA6 219 aa22.39■■□□□ 1.17
MAP1LC3B-206ENST00000564844 GPCPD1Q9NPB8 672 aa22.39■■□□□ 1.17
MAP1LC3B-206ENST00000564844 OSGEPQ9NPF4 335 aa22.39■■□□□ 1.17
MAP1LC3B-206ENST00000564844 FGGP02679 453 aa22.38■■□□□ 1.17
MAP1LC3B-206ENST00000564844 C12orf60Q5U649 245 aa22.38■■□□□ 1.17
MAP1LC3B-206ENST00000564844 AADACL2Q6P093 401 aa22.38■■□□□ 1.17
MAP1LC3B-206ENST00000564844 INTS5Q6P9B9 1019 aaKnown RBP22.38■■□□□ 1.17
MAP1LC3B-206ENST00000564844 U2AF1L4Q8WU68 220 aaKnown RBP22.38■■□□□ 1.17
MAP1LC3B-206ENST00000564844 KIAA1024Q9UPX6 916 aa22.38■■□□□ 1.17
MAP1LC3B-206ENST00000564844 UBR2Q8IWV8 1755 aa22.38■■□□□ 1.17
MAP1LC3B-206ENST00000564844 F8W031 263 aaPredicted RBP22.38■■□□□ 1.17
MAP1LC3B-206ENST00000564844 PGRMC1O00264 195 aaKnown RBP22.38■■□□□ 1.17
MAP1LC3B-206ENST00000564844 VIMP08670 466 aaKnown RBP22.38■■□□□ 1.17
MAP1LC3B-206ENST00000564844 GNAQP50148 359 aa22.38■■□□□ 1.17
MAP1LC3B-206ENST00000564844 PLTPP55058 493 aa22.38■■□□□ 1.17
MAP1LC3B-206ENST00000564844 ITPK1Q13572 414 aa22.38■■□□□ 1.17
MAP1LC3B-206ENST00000564844 RUFY4Q6ZNE9 571 aa22.38■■□□□ 1.17
MAP1LC3B-206ENST00000564844 STAMBPL1Q96FJ0 436 aa22.38■■□□□ 1.17
MAP1LC3B-206ENST00000564844 MYO1EQ12965 1108 aa22.37■■□□□ 1.17
MAP1LC3B-206ENST00000564844 TMEM266Q2M3C6 531 aa22.37■■□□□ 1.17
MAP1LC3B-206ENST00000564844 TACO1Q9BSH4 297 aaKnown RBP22.37■■□□□ 1.17
MAP1LC3B-206ENST00000564844 FOXO6A8MYZ6 492 aa22.37■■□□□ 1.17
MAP1LC3B-206ENST00000564844 CAMTA2O94983 1202 aa22.37■■□□□ 1.17
MAP1LC3B-206ENST00000564844 CHN1P15882 459 aa22.37■■□□□ 1.17
MAP1LC3B-206ENST00000564844 GNA11P29992 359 aa22.37■■□□□ 1.17
MAP1LC3B-206ENST00000564844 UBE4AQ14139 1066 aa22.37■■□□□ 1.17
MAP1LC3B-206ENST00000564844 MIEF2Q96C03 454 aa22.37■■□□□ 1.17
MAP1LC3B-206ENST00000564844 SNX24Q9Y343 169 aa22.37■■□□□ 1.17
MAP1LC3B-206ENST00000564844 SPDYE3A6NKU9 549 aa22.37■■□□□ 1.17
MAP1LC3B-206ENST00000564844 IFI35P80217 286 aaPredicted RBP22.37■■□□□ 1.17
MAP1LC3B-206ENST00000564844 LRRC14Q15048 493 aa22.37■■□□□ 1.17
MAP1LC3B-206ENST00000564844 LRRC47Q8N1G4 583 aaKnown RBP22.37■■□□□ 1.17
MAP1LC3B-206ENST00000564844 PALM3A6NDB9 673 aaPredicted RBP22.36■■□□□ 1.17
MAP1LC3B-206ENST00000564844 MEIS1O00470 390 aa22.36■■□□□ 1.17
MAP1LC3B-206ENST00000564844 PCP11498 1178 aaKnown RBP22.36■■□□□ 1.17
MAP1LC3B-206ENST00000564844 MAGEF1Q9HAY2 307 aa22.36■■□□□ 1.17
MAP1LC3B-206ENST00000564844 AJAP1Q9UKB5 411 aaPredicted RBP22.36■■□□□ 1.17
MAP1LC3B-206ENST00000564844 NUP98P52948 1817 aa22.36■■□□□ 1.17
MAP1LC3B-206ENST00000564844 STAT3P40763 770 aa22.36■■□□□ 1.17
MAP1LC3B-206ENST00000564844 USP11P51784 963 aa22.36■■□□□ 1.17
MAP1LC3B-206ENST00000564844 TMC3Q7Z5M5 1100 aa22.36■■□□□ 1.17
MAP1LC3B-206ENST00000564844 PSMD1Q99460 953 aa22.36■■□□□ 1.17
MAP1LC3B-206ENST00000564844 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.36■■□□□ 1.178e-8■■■■□ 25.6
MAP1LC3B-206ENST00000564844 UPP2O95045 317 aa22.35■■□□□ 1.17
MAP1LC3B-206ENST00000564844 MMEP08473 750 aa22.35■■□□□ 1.17
MAP1LC3B-206ENST00000564844 CASP5P51878 434 aa22.35■■□□□ 1.17
MAP1LC3B-206ENST00000564844 ADCY1Q08828 1119 aa22.35■■□□□ 1.17
MAP1LC3B-206ENST00000564844 FAM182BQ5T319 152 aa22.35■■□□□ 1.17
MAP1LC3B-206ENST00000564844 SCFD2Q8WU76 684 aa22.35■■□□□ 1.17
MAP1LC3B-206ENST00000564844 TATDN2Q93075 761 aa22.35■■□□□ 1.17
MAP1LC3B-206ENST00000564844 ANKIB1Q9P2G1 1089 aa22.35■■□□□ 1.17
MAP1LC3B-206ENST00000564844 RBAK-RBAKDNI3L0D1 243 aa22.35■■□□□ 1.17
MAP1LC3B-206ENST00000564844 NR2F2P24468 414 aa22.35■■□□□ 1.17
MAP1LC3B-206ENST00000564844 NAGPAQ9UK23 515 aa22.35■■□□□ 1.17
MAP1LC3B-206ENST00000564844 DOCK2Q92608 1830 aa22.35■■□□□ 1.17
MAP1LC3B-206ENST00000564844 PVALEFA0A1B0GWK0 134 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 POTEB3A0JP26 581 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 POTECB2RU33 542 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 CLIC2O15247 247 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 DRD4P21917 467 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 POTEBQ6S5H4 581 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 MAEAQ7L5Y9 396 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 OTUD6AQ7L8S5 288 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 HOMEZQ8IX15 550 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms