RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 SHBGP04278 402 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 ITGA4P13612 1032 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 ABL2P42684 1182 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 IFNAR2P48551 515 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 TROAPQ12815 778 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 CCDC197Q8NCU1 140 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 UHMK1Q8TAS1 419 aaKnown RBP17.8■□□□□ 0.44
LINC00554-201ENST00000564841 CHMP6Q96FZ7 201 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 ERGIC2Q96RQ1 377 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 SELENOSQ9BQE4 189 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 MXD3Q9BW11 206 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 GGA1Q9UJY5 639 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 FAM205AQ6ZU69 1335 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 RREB1Q92766 1687 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 BCORQ6W2J9 1755 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 TLDC2A0PJX2 215 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 TSPY2A6NKD2 308 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 CAND2O75155 1236 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 CDK17Q00537 523 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 ADCY2Q08462 1091 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 DOK7Q18PE1 504 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 UBAP2Q5T6F2 1119 aaKnown RBP17.8■□□□□ 0.44
LINC00554-201ENST00000564841 LRRC34Q8IZ02 419 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 USP38Q8NB14 1042 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 XPO6Q96QU8 1125 aaKnown RBP17.8■□□□□ 0.44
LINC00554-201ENST00000564841 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.8■□□□□ 0.44
LINC00554-201ENST00000564841 SEMA6BQ9H3T3 888 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 POLLQ9UGP5 575 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 AMACRQ9UHK6 382 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 TRIM33Q9UPN9 1127 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 ZNF804AQ7Z570 1209 aa17.79■□□□□ 0.44
LINC00554-201ENST00000564841 COL23A1Q86Y22 540 aaPredicted RBP17.79■□□□□ 0.44
LINC00554-201ENST00000564841 CCDC26Q8TAB7 109 aa17.79■□□□□ 0.44
LINC00554-201ENST00000564841 ZNF526Q8TF50 670 aaPredicted RBP17.79■□□□□ 0.44
LINC00554-201ENST00000564841 L3MBTL3Q96JM7 780 aaPredicted RBP17.79■□□□□ 0.44
LINC00554-201ENST00000564841 SH3GL3Q99963 347 aa17.79■□□□□ 0.44
LINC00554-201ENST00000564841 ISCUQ9H1K1 167 aa17.79■□□□□ 0.44
LINC00554-201ENST00000564841 CEP104O60308 925 aa17.79■□□□□ 0.44
LINC00554-201ENST00000564841 CHN1P15882 459 aa17.79■□□□□ 0.44
LINC00554-201ENST00000564841 CCNE1P24864 410 aa17.79■□□□□ 0.44
LINC00554-201ENST00000564841 ALDH5A1P51649 535 aaPredicted RBP17.79■□□□□ 0.44
LINC00554-201ENST00000564841 BAP1Q92560 729 aa17.79■□□□□ 0.44
LINC00554-201ENST00000564841 RBM17Q96I25 401 aaKnown RBP17.79■□□□□ 0.44
LINC00554-201ENST00000564841 MYH2Q9UKX2 1941 aa17.78■□□□□ 0.44
LINC00554-201ENST00000564841 RHOBTB3O94955 611 aa17.78■□□□□ 0.44
LINC00554-201ENST00000564841 GTF2IP78347 998 aa17.78■□□□□ 0.44
LINC00554-201ENST00000564841 DHX9Q08211 1270 aaKnown RBP17.78■□□□□ 0.44
LINC00554-201ENST00000564841 ASTE1Q2TB18 679 aaPredicted RBP17.78■□□□□ 0.44
LINC00554-201ENST00000564841 HGSNATQ68CP4 663 aa17.78■□□□□ 0.44
LINC00554-201ENST00000564841 CACNA2D4Q7Z3S7 1137 aa17.78■□□□□ 0.44
LINC00554-201ENST00000564841 TMTC2Q8N394 836 aa17.78■□□□□ 0.44
LINC00554-201ENST00000564841 C4orf32Q8N8J7 132 aa17.78■□□□□ 0.44
LINC00554-201ENST00000564841 VAT1LQ9HCJ6 419 aa17.78■□□□□ 0.44
LINC00554-201ENST00000564841 THSD7AQ9UPZ6 1657 aa17.78■□□□□ 0.44
LINC00554-201ENST00000564841 USP17L3A6NCW0 530 aa17.78■□□□□ 0.44
LINC00554-201ENST00000564841 USP17L4A6NCW7 530 aa17.78■□□□□ 0.44
LINC00554-201ENST00000564841 TLR2O60603 784 aa17.78■□□□□ 0.44
LINC00554-201ENST00000564841 LINGO3P0C6S8 592 aa17.78■□□□□ 0.44
LINC00554-201ENST00000564841 USP17L1Q7RTZ2 530 aa17.78■□□□□ 0.44
LINC00554-201ENST00000564841 CD209Q9NNX6 404 aa17.78■□□□□ 0.44
LINC00554-201ENST00000564841 CICQ96RK0 1608 aaPredicted RBP17.78■□□□□ 0.44
LINC00554-201ENST00000564841 SART1O43290 800 aaKnown RBP17.77■□□□□ 0.44
LINC00554-201ENST00000564841 PRPF3O43395 683 aaKnown RBP17.77■□□□□ 0.44
LINC00554-201ENST00000564841 LCA5LO95447 670 aa17.77■□□□□ 0.44
LINC00554-201ENST00000564841 BMP15O95972 392 aa17.77■□□□□ 0.44
LINC00554-201ENST00000564841 ASIC1P78348 528 aa17.77■□□□□ 0.44
LINC00554-201ENST00000564841 GNPTABQ3T906 1256 aa17.77■□□□□ 0.44
LINC00554-201ENST00000564841 MFSD14BQ5SR56 506 aa17.77■□□□□ 0.44
LINC00554-201ENST00000564841 TRIM68Q6AZZ1 485 aa17.77■□□□□ 0.44
LINC00554-201ENST00000564841 TBC1D5Q92609 795 aa17.77■□□□□ 0.44
LINC00554-201ENST00000564841 TANGO6Q9C0B7 1094 aa17.77■□□□□ 0.44
LINC00554-201ENST00000564841 ETAA1Q9NY74 926 aa17.77■□□□□ 0.44
LINC00554-201ENST00000564841 ATP8A1Q9Y2Q0 1164 aa17.77■□□□□ 0.44
LINC00554-201ENST00000564841 A0A1W2PQJ5 194 aa17.77■□□□□ 0.44
LINC00554-201ENST00000564841 G3V3G9 751 aa17.77■□□□□ 0.44
LINC00554-201ENST00000564841 POLRMTO00411 1230 aaKnown RBP17.77■□□□□ 0.44
LINC00554-201ENST00000564841 UBOX5O94941 541 aa17.77■□□□□ 0.44
LINC00554-201ENST00000564841 MMP10P09238 476 aa17.77■□□□□ 0.44
LINC00554-201ENST00000564841 HNRNPH3P31942 346 aaKnown RBP17.77■□□□□ 0.44
LINC00554-201ENST00000564841 UBA7P41226 1012 aa17.77■□□□□ 0.44
LINC00554-201ENST00000564841 VWA3BQ502W6 1294 aa17.77■□□□□ 0.44
LINC00554-201ENST00000564841 DCAF8Q5TAQ9 597 aa17.77■□□□□ 0.44
LINC00554-201ENST00000564841 ADAMTS1Q9UHI8 967 aa17.77■□□□□ 0.44
LINC00554-201ENST00000564841 SLC12A4Q9UP95 1085 aa17.77■□□□□ 0.44
LINC00554-201ENST00000564841 NHSQ6T4R5 1651 aa17.77■□□□□ 0.43
LINC00554-201ENST00000564841 TNRC6CQ9HCJ0 1690 aaKnown RBP17.77■□□□□ 0.43
LINC00554-201ENST00000564841 GRID2IPA4D2P6 1211 aa17.77■□□□□ 0.43
LINC00554-201ENST00000564841 PJA2O43164 708 aa17.77■□□□□ 0.43
LINC00554-201ENST00000564841 MMEP08473 750 aa17.77■□□□□ 0.43
LINC00554-201ENST00000564841 ADRA2BP18089 450 aa17.77■□□□□ 0.43
LINC00554-201ENST00000564841 SEMA3FQ13275 785 aa17.77■□□□□ 0.43
LINC00554-201ENST00000564841 PICALMQ13492 652 aa17.77■□□□□ 0.43
LINC00554-201ENST00000564841 INF2Q27J81 1249 aa17.77■□□□□ 0.43
LINC00554-201ENST00000564841 KIAA0753Q2KHM9 967 aa17.77■□□□□ 0.43
LINC00554-201ENST00000564841 ERMARDQ5T6L9 678 aa17.77■□□□□ 0.43
LINC00554-201ENST00000564841 LRIG3Q6UXM1 1119 aa17.77■□□□□ 0.43
LINC00554-201ENST00000564841 RUFY4Q6ZNE9 571 aa17.77■□□□□ 0.43
LINC00554-201ENST00000564841 TMTC3Q6ZXV5 915 aa17.77■□□□□ 0.43
LINC00554-201ENST00000564841 ZSCAN29Q8IWY8 852 aaPredicted RBP17.77■□□□□ 0.43
LINC00554-201ENST00000564841 C1orf131Q8NDD1 294 aaKnown RBP17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms