RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.61■■□□□ 1.53
SPSB3-206ENST00000564709 RPA1P27694 616 aa24.6■■□□□ 1.53
SPSB3-206ENST00000564709 HOXD13P35453 343 aa24.6■■□□□ 1.53
SPSB3-206ENST00000564709 SPATA4Q8NEY3 305 aa24.6■■□□□ 1.53
SPSB3-206ENST00000564709 HDAC9Q9UKV0 1011 aa24.6■■□□□ 1.53
SPSB3-206ENST00000564709 HPCAL4Q9UM19 191 aa24.6■■□□□ 1.53
SPSB3-206ENST00000564709 CCDC181Q5TID7 509 aa24.6■■□□□ 1.53
SPSB3-206ENST00000564709 KLHDC7AQ5VTJ3 777 aa24.6■■□□□ 1.53
SPSB3-206ENST00000564709 ZC3H3Q8IXZ2 948 aaKnown RBP24.6■■□□□ 1.53
SPSB3-206ENST00000564709 SYT2Q8N9I0 419 aaPredicted RBP24.6■■□□□ 1.53
SPSB3-206ENST00000564709 TLR10Q9BXR5 811 aa24.6■■□□□ 1.53
SPSB3-206ENST00000564709 GANQ9H2C0 597 aa24.6■■□□□ 1.53
SPSB3-206ENST00000564709 BHMT2Q9H2M3 363 aa24.6■■□□□ 1.53
SPSB3-206ENST00000564709 ACBD3Q9H3P7 528 aa24.6■■□□□ 1.53
SPSB3-206ENST00000564709 RBAK-RBAKDNI3L0D1 243 aa24.59■■□□□ 1.53
SPSB3-206ENST00000564709 CHRNA5P30532 468 aa24.59■■□□□ 1.53
SPSB3-206ENST00000564709 SLC7A5Q01650 507 aa24.59■■□□□ 1.53
SPSB3-206ENST00000564709 EDRF1Q3B7T1 1238 aa24.59■■□□□ 1.53
SPSB3-206ENST00000564709 RBM26Q5T8P6 1007 aaKnown RBP24.59■■□□□ 1.53
SPSB3-206ENST00000564709 CCNI2Q6ZMN8 369 aaPredicted RBP24.59■■□□□ 1.53
SPSB3-206ENST00000564709 FAM71BQ8TC56 605 aa24.59■■□□□ 1.53
SPSB3-206ENST00000564709 SELENOOQ9BVL4 669 aa24.59■■□□□ 1.53
SPSB3-206ENST00000564709 MRIQ9BWK5 157 aa24.59■■□□□ 1.53
SPSB3-206ENST00000564709 VAV3Q9UKW4 847 aa24.59■■□□□ 1.53
SPSB3-206ENST00000564709 TCP1P17987 556 aaKnown RBP24.58■■□□□ 1.53
SPSB3-206ENST00000564709 ZNF76P36508 570 aa24.58■■□□□ 1.53
SPSB3-206ENST00000564709 SYN2Q92777 582 aaPredicted RBP24.58■■□□□ 1.53
SPSB3-206ENST00000564709 MS4A14Q96JA4 679 aa24.58■■□□□ 1.53
SPSB3-206ENST00000564709 CSRNP1Q96S65 589 aa24.58■■□□□ 1.53
SPSB3-206ENST00000564709 RUSC1Q9BVN2 902 aa24.58■■□□□ 1.53
SPSB3-206ENST00000564709 PACSIN1Q9BY11 444 aa24.58■■□□□ 1.53
SPSB3-206ENST00000564709 NUCKS1Q9H1E3 243 aaKnown RBP24.58■■□□□ 1.53
SPSB3-206ENST00000564709 RGL1Q9NZL6 768 aa24.58■■□□□ 1.53
SPSB3-206ENST00000564709 DMGDHQ9UI17 866 aaKnown RBP24.58■■□□□ 1.53
SPSB3-206ENST00000564709 SERPINA10Q9UK55 444 aa24.58■■□□□ 1.53
SPSB3-206ENST00000564709 FAM184BQ9ULE4 1060 aa24.58■■□□□ 1.53
SPSB3-206ENST00000564709 A0A087X0T9 212 aa24.58■■□□□ 1.53
SPSB3-206ENST00000564709 EML1O00423 815 aa24.58■■□□□ 1.53
SPSB3-206ENST00000564709 TBX3O15119 743 aa24.58■■□□□ 1.53
SPSB3-206ENST00000564709 SLC26A4O43511 780 aa24.58■■□□□ 1.53
SPSB3-206ENST00000564709 FAM228BP0C875 321 aa24.58■■□□□ 1.53
SPSB3-206ENST00000564709 PRLRP16471 622 aa24.58■■□□□ 1.53
SPSB3-206ENST00000564709 HDLBPQ00341 1268 aaKnown RBP24.58■■□□□ 1.53
SPSB3-206ENST00000564709 MMGT1Q8N4V1 131 aa24.58■■□□□ 1.53
SPSB3-206ENST00000564709 RIN2Q8WYP3 895 aaPredicted RBP24.58■■□□□ 1.53
SPSB3-206ENST00000564709 SLC9A1P19634 815 aa24.57■■□□□ 1.52
SPSB3-206ENST00000564709 ECE1P42892 770 aa24.57■■□□□ 1.52
SPSB3-206ENST00000564709 KLHL30Q0D2K2 578 aa24.57■■□□□ 1.52
SPSB3-206ENST00000564709 ASIC2Q16515 512 aa24.57■■□□□ 1.52
SPSB3-206ENST00000564709 KNOP1Q1ED39 458 aaKnown RBP24.57■■□□□ 1.52
SPSB3-206ENST00000564709 DCAF17Q5H9S7 520 aaPredicted RBP24.57■■□□□ 1.52
SPSB3-206ENST00000564709 PPP4R3CPQ6ZMV5 832 aa24.57■■□□□ 1.52
SPSB3-206ENST00000564709 PRMT6Q96LA8 375 aaPredicted RBP24.57■■□□□ 1.52
SPSB3-206ENST00000564709 ADAMTS1Q9UHI8 967 aa24.57■■□□□ 1.52
SPSB3-206ENST00000564709 PRR12Q9ULL5 1215 aa24.57■■□□□ 1.52
SPSB3-206ENST00000564709 PALMO75781 387 aa24.57■■□□□ 1.52
SPSB3-206ENST00000564709 SYF2O95926 243 aaKnown RBP24.57■■□□□ 1.52
SPSB3-206ENST00000564709 FTCDO95954 541 aa24.57■■□□□ 1.52
SPSB3-206ENST00000564709 APBA3O96018 575 aa24.57■■□□□ 1.52
SPSB3-206ENST00000564709 KLRC1P26715 233 aa24.57■■□□□ 1.52
SPSB3-206ENST00000564709 CCDC70Q6NSX1 233 aa24.57■■□□□ 1.52
SPSB3-206ENST00000564709 ZNF572Q7Z3I7 529 aaPredicted RBP24.57■■□□□ 1.52
SPSB3-206ENST00000564709 VIPAS39Q9H9C1 493 aa24.57■■□□□ 1.52
SPSB3-206ENST00000564709 CALCOCO1Q9P1Z2 691 aa24.57■■□□□ 1.52
SPSB3-206ENST00000564709 ZC3H4Q9UPT8 1303 aaKnown RBP24.56■■□□□ 1.52
SPSB3-206ENST00000564709 A0A0U1RQG5 324 aaPredicted RBP24.56■■□□□ 1.52
SPSB3-206ENST00000564709 SFI1A8K8P3 1242 aa24.56■■□□□ 1.52
SPSB3-206ENST00000564709 FOSP01100 380 aaPredicted RBP24.56■■□□□ 1.52
SPSB3-206ENST00000564709 FKBP1AP62942 108 aaKnown RBP24.56■■□□□ 1.52
SPSB3-206ENST00000564709 KCNA1Q09470 495 aa24.56■■□□□ 1.52
SPSB3-206ENST00000564709 ARHGAP27Q6ZUM4 889 aa24.56■■□□□ 1.52
SPSB3-206ENST00000564709 EIF2AK1Q9BQI3 630 aaKnown RBP24.56■■□□□ 1.52
SPSB3-206ENST00000564709 IKZF4Q9H2S9 585 aa24.56■■□□□ 1.52
SPSB3-206ENST00000564709 ARMCX3Q9UH62 379 aaPredicted RBP24.56■■□□□ 1.52
SPSB3-206ENST00000564709 H0YIN7 160 aa24.56■■□□□ 1.52
SPSB3-206ENST00000564709 CHMP2AO43633 222 aa24.56■■□□□ 1.52
SPSB3-206ENST00000564709 RNF40O75150 1001 aa24.56■■□□□ 1.52
SPSB3-206ENST00000564709 SLC18A3Q16572 532 aa24.56■■□□□ 1.52
SPSB3-206ENST00000564709 KIAA1755Q5JYT7 1200 aa24.56■■□□□ 1.52
SPSB3-206ENST00000564709 TAF3Q5VWG9 929 aa24.56■■□□□ 1.52
SPSB3-206ENST00000564709 EPM2AIP1Q7L775 607 aaPredicted RBP24.56■■□□□ 1.52
SPSB3-206ENST00000564709 PIGOQ8TEQ8 1089 aa24.56■■□□□ 1.52
SPSB3-206ENST00000564709 ZFP91Q96JP5 570 aaPredicted RBP24.56■■□□□ 1.52
SPSB3-206ENST00000564709 FAM20AQ96MK3 541 aa24.56■■□□□ 1.52
SPSB3-206ENST00000564709 MED4Q9NPJ6 270 aa24.56■■□□□ 1.52
SPSB3-206ENST00000564709 PSD3Q9NYI0 1048 aa24.56■■□□□ 1.52
SPSB3-206ENST00000564709 PACSIN2Q9UNF0 486 aaPredicted RBP24.56■■□□□ 1.52
SPSB3-206ENST00000564709 GCNT3O95395 438 aa24.55■■□□□ 1.52
SPSB3-206ENST00000564709 MMP14P50281 582 aa24.55■■□□□ 1.52
SPSB3-206ENST00000564709 UBXN2AP68543 259 aa24.55■■□□□ 1.52
SPSB3-206ENST00000564709 CTTNQ14247 550 aaKnown RBP24.55■■□□□ 1.52
SPSB3-206ENST00000564709 FAM204AQ9H8W3 233 aa24.55■■□□□ 1.52
SPSB3-206ENST00000564709 RBM12Q9NTZ6 932 aaKnown RBP24.55■■□□□ 1.52
SPSB3-206ENST00000564709 TRAF3IP3Q9Y228 551 aa24.55■■□□□ 1.52
SPSB3-206ENST00000564709 CLIC2O15247 247 aa24.55■■□□□ 1.52
SPSB3-206ENST00000564709 AKAP3O75969 853 aa24.55■■□□□ 1.52
SPSB3-206ENST00000564709 POLD1P28340 1107 aa24.55■■□□□ 1.52
SPSB3-206ENST00000564709 CASP4P49662 377 aa24.55■■□□□ 1.52
SPSB3-206ENST00000564709 DNAAF5Q86Y56 855 aa24.55■■□□□ 1.52
SPSB3-206ENST00000564709 RNF10Q8N5U6 811 aaKnown RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms