RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 RFXAPO00287 272 aa17.11■□□□□ 0.33
SPG7-210ENST00000564409 CTSHP09668 335 aa17.11■□□□□ 0.33
SPG7-210ENST00000564409 ZNF76P36508 570 aa17.11■□□□□ 0.33
SPG7-210ENST00000564409 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.11■□□□□ 0.33
SPG7-210ENST00000564409 Q6ZUG5 572 aa17.11■□□□□ 0.33
SPG7-210ENST00000564409 TMCO2Q7Z6W1 182 aaPredicted RBP17.11■□□□□ 0.33
SPG7-210ENST00000564409 MYOCDQ8IZQ8 938 aa17.11■□□□□ 0.33
SPG7-210ENST00000564409 SP7Q8TDD2 431 aaPredicted RBP17.11■□□□□ 0.33
SPG7-210ENST00000564409 AGXT2Q9BYV1 514 aa17.11■□□□□ 0.33
SPG7-210ENST00000564409 ZMYND12Q9H0C1 365 aa17.11■□□□□ 0.33
SPG7-210ENST00000564409 NAP1L2Q9ULW6 460 aaPredicted RBP17.11■□□□□ 0.33
SPG7-210ENST00000564409 SNX14Q9Y5W7 946 aa17.11■□□□□ 0.33
SPG7-210ENST00000564409 SQORQ9Y6N5 450 aa17.11■□□□□ 0.33
SPG7-210ENST00000564409 MYH9P35579 1960 aaKnown RBP17.11■□□□□ 0.33
SPG7-210ENST00000564409 COL4A4P53420 1690 aaPredicted RBP17.1■□□□□ 0.33
SPG7-210ENST00000564409 TNFRSF10AO00220 468 aa17.1■□□□□ 0.33
SPG7-210ENST00000564409 PRPF3O43395 683 aaKnown RBP17.1■□□□□ 0.33
SPG7-210ENST00000564409 LPXNO60711 386 aa17.1■□□□□ 0.33
SPG7-210ENST00000564409 ATG7O95352 703 aa17.1■□□□□ 0.33
SPG7-210ENST00000564409 CYP3A4P08684 503 aa17.1■□□□□ 0.33
SPG7-210ENST00000564409 GNA11P29992 359 aa17.1■□□□□ 0.33
SPG7-210ENST00000564409 ADD1P35611 737 aaKnown RBP17.1■□□□□ 0.33
SPG7-210ENST00000564409 ACTR2P61160 394 aa17.1■□□□□ 0.33
SPG7-210ENST00000564409 SKIV2LQ15477 1246 aaKnown RBP17.1■□□□□ 0.33
SPG7-210ENST00000564409 BRF1Q92994 677 aa17.1■□□□□ 0.33
SPG7-210ENST00000564409 AGO4Q9HCK5 861 aaKnown RBP17.1■□□□□ 0.33
SPG7-210ENST00000564409 C6orf50Q9HD87 102 aa17.1■□□□□ 0.33
SPG7-210ENST00000564409 PKD2L1Q9P0L9 805 aa17.1■□□□□ 0.33
SPG7-210ENST00000564409 CHRNA1P02708 482 aa17.09■□□□□ 0.33
SPG7-210ENST00000564409 INSRRP14616 1297 aa17.09■□□□□ 0.33
SPG7-210ENST00000564409 RPS6KB1P23443 525 aa17.09■□□□□ 0.33
SPG7-210ENST00000564409 MARK3P27448 753 aa17.09■□□□□ 0.33
SPG7-210ENST00000564409 STAT5BP51692 787 aa17.09■□□□□ 0.33
SPG7-210ENST00000564409 EVCP57679 992 aa17.09■□□□□ 0.33
SPG7-210ENST00000564409 AKAP17AQ02040 695 aaKnown RBP17.09■□□□□ 0.33
SPG7-210ENST00000564409 APOBRQ0VD83 1088 aa17.09■□□□□ 0.33
SPG7-210ENST00000564409 MARCH8Q5T0T0 291 aa17.09■□□□□ 0.33
SPG7-210ENST00000564409 IER5Q5VY09 327 aa17.09■□□□□ 0.33
SPG7-210ENST00000564409 FAM117BQ6P1L5 589 aa17.09■□□□□ 0.33
SPG7-210ENST00000564409 CYP2W1Q8TAV3 490 aa17.09■□□□□ 0.33
SPG7-210ENST00000564409 BICD2Q8TD16 824 aa17.09■□□□□ 0.33
SPG7-210ENST00000564409 SUGCTQ9HAC7 445 aa17.09■□□□□ 0.33
SPG7-210ENST00000564409 RALGAPA2Q2PPJ7 1873 aa17.09■□□□□ 0.33
SPG7-210ENST00000564409 TTC3P53804 2025 aa17.09■□□□□ 0.33
SPG7-210ENST00000564409 NLRC5Q86WI3 1866 aa17.08■□□□□ 0.33
SPG7-210ENST00000564409 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.08■□□□□ 0.32
SPG7-210ENST00000564409 ARP10275 920 aa17.08■□□□□ 0.32
SPG7-210ENST00000564409 SETQ01105 290 aaPredicted RBP17.08■□□□□ 0.32
SPG7-210ENST00000564409 MGAT3Q09327 533 aa17.08■□□□□ 0.32
SPG7-210ENST00000564409 RUFY4Q6ZNE9 571 aa17.08■□□□□ 0.32
SPG7-210ENST00000564409 REXO1Q8N1G1 1221 aaKnown RBP17.08■□□□□ 0.32
SPG7-210ENST00000564409 NME8Q8N427 588 aa17.08■□□□□ 0.32
SPG7-210ENST00000564409 FBXO22Q8NEZ5 403 aa17.08■□□□□ 0.32
SPG7-210ENST00000564409 CCDC148Q8NFR7 591 aa17.08■□□□□ 0.32
SPG7-210ENST00000564409 ADAMTS19Q8TE59 1207 aa17.08■□□□□ 0.32
SPG7-210ENST00000564409 CRYGNQ8WXF5 182 aa17.08■□□□□ 0.32
SPG7-210ENST00000564409 HLA-CQ95604 372 aa17.08■□□□□ 0.32
SPG7-210ENST00000564409 YME1L1Q96TA2 773 aa17.08■□□□□ 0.32
SPG7-210ENST00000564409 PCYT2Q99447 389 aa17.08■□□□□ 0.32
SPG7-210ENST00000564409 RNF26Q9BY78 433 aaPredicted RBP17.08■□□□□ 0.32
SPG7-210ENST00000564409 TRPC6Q9Y210 931 aa17.08■□□□□ 0.32
SPG7-210ENST00000564409 PCDHA2Q9Y5H9 948 aa17.08■□□□□ 0.32
SPG7-210ENST00000564409 IGKV6D-21A0A0A0MT36 114 aa17.07■□□□□ 0.32
SPG7-210ENST00000564409 M0QZ92 97 aa17.07■□□□□ 0.32
SPG7-210ENST00000564409 MRPS6P82932 125 aaKnown RBP17.07■□□□□ 0.32
SPG7-210ENST00000564409 ITGB3BPQ13352 177 aaPredicted RBP17.07■□□□□ 0.32
SPG7-210ENST00000564409 FBXO47Q5MNV8 452 aa17.07■□□□□ 0.32
SPG7-210ENST00000564409 FAM160B1Q5W0V3 765 aa17.07■□□□□ 0.32
SPG7-210ENST00000564409 TSHZ1Q6ZSZ6 1077 aa17.07■□□□□ 0.32
SPG7-210ENST00000564409 PLA2G4DQ86XP0 818 aa17.07■□□□□ 0.32
SPG7-210ENST00000564409 DNAJB3Q8WWF6 145 aa17.07■□□□□ 0.32
SPG7-210ENST00000564409 PGBD1Q96JS3 809 aa17.07■□□□□ 0.32
SPG7-210ENST00000564409 TBC1D22BQ9NU19 505 aa17.07■□□□□ 0.32
SPG7-210ENST00000564409 TCF20Q9UGU0 1960 aaKnown RBP17.07■□□□□ 0.32
SPG7-210ENST00000564409 LOXHD1Q8IVV2 1947 aa17.07■□□□□ 0.32
SPG7-210ENST00000564409 BRWD1Q9NSI6 2320 aa17.06■□□□□ 0.32
SPG7-210ENST00000564409 IGLV3-22A0A075B6J6 115 aa17.06■□□□□ 0.32
SPG7-210ENST00000564409 POTEB3A0JP26 581 aa17.06■□□□□ 0.32
SPG7-210ENST00000564409 IPO5O00410 1097 aaKnown RBP17.06■□□□□ 0.32
SPG7-210ENST00000564409 GHRP10912 638 aa17.06■□□□□ 0.32
SPG7-210ENST00000564409 BMP1P13497 986 aa17.06■□□□□ 0.32
SPG7-210ENST00000564409 CPA1P15085 419 aa17.06■□□□□ 0.32
SPG7-210ENST00000564409 IFNAR1P17181 557 aa17.06■□□□□ 0.32
SPG7-210ENST00000564409 IGBP1P78318 339 aa17.06■□□□□ 0.32
SPG7-210ENST00000564409 LPIN1Q14693 890 aa17.06■□□□□ 0.32
SPG7-210ENST00000564409 PLCB4Q15147 1175 aa17.06■□□□□ 0.32
SPG7-210ENST00000564409 PKN1Q16512 942 aa17.06■□□□□ 0.32
SPG7-210ENST00000564409 PTPROQ16827 1216 aa17.06■□□□□ 0.32
SPG7-210ENST00000564409 JAKMIP3Q5VZ66 844 aa17.06■□□□□ 0.32
SPG7-210ENST00000564409 POTEBQ6S5H4 581 aa17.06■□□□□ 0.32
SPG7-210ENST00000564409 ABHD15Q6UXT9 468 aa17.06■□□□□ 0.32
SPG7-210ENST00000564409 SPRED2Q7Z698 418 aa17.06■□□□□ 0.32
SPG7-210ENST00000564409 FAM177A1Q8N128 213 aaPredicted RBP17.06■□□□□ 0.32
SPG7-210ENST00000564409 GDPD5Q8WTR4 605 aa17.06■□□□□ 0.32
SPG7-210ENST00000564409 UHRF1Q96T88 793 aaPredicted RBP17.06■□□□□ 0.32
SPG7-210ENST00000564409 FTHL17Q9BXU8 183 aa17.06■□□□□ 0.32
SPG7-210ENST00000564409 SH3GLB2Q9NR46 395 aa17.06■□□□□ 0.32
SPG7-210ENST00000564409 TMEM260Q9NX78 707 aa17.06■□□□□ 0.32
SPG7-210ENST00000564409 MTUS1Q9ULD2 1270 aa17.06■□□□□ 0.32
SPG7-210ENST00000564409 RWDD3Q9Y3V2 267 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms