RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 ARL6IP4Q66PJ3 421 aaKnown RBP18.79■□□□□ 0.6
RNF40-206ENST00000564260 MIER3Q7Z3K6 550 aa18.79■□□□□ 0.6
RNF40-206ENST00000564260 CCDC155Q8N6L0 562 aa18.79■□□□□ 0.6
RNF40-206ENST00000564260 CAGE1Q8TC20 777 aa18.79■□□□□ 0.6
RNF40-206ENST00000564260 ATP8B4Q8TF62 1192 aa18.79■□□□□ 0.6
RNF40-206ENST00000564260 BBXQ8WY36 941 aaPredicted RBP18.79■□□□□ 0.6
RNF40-206ENST00000564260 PCYT2Q99447 389 aa18.79■□□□□ 0.6
RNF40-206ENST00000564260 TTC12Q9H892 705 aaPredicted RBP18.79■□□□□ 0.6
RNF40-206ENST00000564260 PDLIM7Q9NR12 457 aa18.79■□□□□ 0.6
RNF40-206ENST00000564260 TBX21Q9UL17 535 aa18.79■□□□□ 0.6
RNF40-206ENST00000564260 PPME1Q9Y570 386 aa18.79■□□□□ 0.6
RNF40-206ENST00000564260 C17orf102A2RUQ5 167 aa18.78■□□□□ 0.6
RNF40-206ENST00000564260 PITPNM1O00562 1244 aa18.78■□□□□ 0.6
RNF40-206ENST00000564260 PARNO95453 639 aaKnown RBP18.78■□□□□ 0.6
RNF40-206ENST00000564260 P4HBP07237 508 aaKnown RBP18.78■□□□□ 0.6
RNF40-206ENST00000564260 SMIM10L2AP0DMW4 78 aa18.78■□□□□ 0.6
RNF40-206ENST00000564260 SMIM10L2BP0DMW5 78 aa18.78■□□□□ 0.6
RNF40-206ENST00000564260 FXR2P51116 673 aaKnown RBP eCLIP18.78■□□□□ 0.61e-6■■■□□ 14.8
RNF40-206ENST00000564260 RBL2Q08999 1139 aa18.78■□□□□ 0.6
RNF40-206ENST00000564260 SPIRE1Q08AE8 756 aa18.78■□□□□ 0.6
RNF40-206ENST00000564260 PDIA5Q14554 519 aa18.78■□□□□ 0.6
RNF40-206ENST00000564260 EPHA7Q15375 998 aa18.78■□□□□ 0.6
RNF40-206ENST00000564260 FAM47CQ5HY64 1035 aa18.78■□□□□ 0.6
RNF40-206ENST00000564260 PDXDC2PQ6P474 469 aa18.78■□□□□ 0.6
RNF40-206ENST00000564260 CCDC60Q8IWA6 550 aaPredicted RBP18.78■□□□□ 0.6
RNF40-206ENST00000564260 C7orf61Q8IZ16 206 aa18.78■□□□□ 0.6
RNF40-206ENST00000564260 TMEM39AQ9NV64 488 aa18.78■□□□□ 0.6
RNF40-206ENST00000564260 HDAC6Q9UBN7 1215 aa18.78■□□□□ 0.6
RNF40-206ENST00000564260 NOD1Q9Y239 953 aa18.78■□□□□ 0.6
RNF40-206ENST00000564260 TNRC18O15417 2968 aaPredicted RBP18.77■□□□□ 0.6
RNF40-206ENST00000564260 B4GALT4O60513 344 aa18.77■□□□□ 0.6
RNF40-206ENST00000564260 ATP2B1P20020 1258 aa18.77■□□□□ 0.6
RNF40-206ENST00000564260 MUTP22033 750 aa18.77■□□□□ 0.6
RNF40-206ENST00000564260 PSMC5P62195 406 aa18.77■□□□□ 0.6
RNF40-206ENST00000564260 PTK7Q13308 1070 aa18.77■□□□□ 0.6
RNF40-206ENST00000564260 BFSP2Q13515 415 aa18.77■□□□□ 0.6
RNF40-206ENST00000564260 ZNF174Q15697 407 aa18.77■□□□□ 0.6
RNF40-206ENST00000564260 SWSAP1Q6NVH7 229 aa18.77■□□□□ 0.6
RNF40-206ENST00000564260 TAF2Q6P1X5 1199 aa18.77■□□□□ 0.6
RNF40-206ENST00000564260 TRIM50Q86XT4 487 aa18.77■□□□□ 0.6
RNF40-206ENST00000564260 C4orf32Q8N8J7 132 aa18.77■□□□□ 0.6
RNF40-206ENST00000564260 POTEB3A0JP26 581 aa18.76■□□□□ 0.59
RNF40-206ENST00000564260 MBLAC1A4D2B0 266 aaPredicted RBP18.76■□□□□ 0.59
RNF40-206ENST00000564260 WNT7AO00755 349 aa18.76■□□□□ 0.59
RNF40-206ENST00000564260 QARSP47897 775 aaKnown RBP18.76■□□□□ 0.59
RNF40-206ENST00000564260 ADAM17P78536 824 aa18.76■□□□□ 0.59
RNF40-206ENST00000564260 ATP2C1P98194 919 aaPredicted RBP18.76■□□□□ 0.59
RNF40-206ENST00000564260 RESTQ13127 1097 aa18.76■□□□□ 0.59
RNF40-206ENST00000564260 PPFIA1Q13136 1202 aa18.76■□□□□ 0.59
RNF40-206ENST00000564260 PTGDRQ13258 359 aa18.76■□□□□ 0.59
RNF40-206ENST00000564260 PTGISQ16647 500 aa18.76■□□□□ 0.59
RNF40-206ENST00000564260 ZNF484Q5JVG2 852 aa18.76■□□□□ 0.59
RNF40-206ENST00000564260 ATL3Q6DD88 541 aa18.76■□□□□ 0.59
RNF40-206ENST00000564260 POTEBQ6S5H4 581 aa18.76■□□□□ 0.59
RNF40-206ENST00000564260 FAM43BQ6ZT52 329 aaPredicted RBP18.76■□□□□ 0.59
RNF40-206ENST00000564260 RPAINQ86UA6 219 aa18.76■□□□□ 0.59
RNF40-206ENST00000564260 EXOC8Q8IYI6 725 aa18.76■□□□□ 0.59
RNF40-206ENST00000564260 ZNF710Q8N1W2 664 aa18.76■□□□□ 0.59
RNF40-206ENST00000564260 KCTD17Q8N5Z5 321 aa18.76■□□□□ 0.59
RNF40-206ENST00000564260 ERMNQ8TAM6 284 aa18.76■□□□□ 0.59
RNF40-206ENST00000564260 RNPEPQ9H4A4 650 aa18.76■□□□□ 0.59
RNF40-206ENST00000564260 NRBP2Q9NSY0 501 aa18.76■□□□□ 0.59
RNF40-206ENST00000564260 GABBR1Q9UBS5 961 aa18.76■□□□□ 0.59
RNF40-206ENST00000564260 TELO2Q9Y4R8 837 aa18.76■□□□□ 0.59
RNF40-206ENST00000564260 PCDHB6Q9Y5E3 794 aa18.76■□□□□ 0.59
RNF40-206ENST00000564260 SLC26A4O43511 780 aa18.75■□□□□ 0.59
RNF40-206ENST00000564260 CHMP2AO43633 222 aa18.75■□□□□ 0.59
RNF40-206ENST00000564260 LYPLA2O95372 231 aa18.75■□□□□ 0.59
RNF40-206ENST00000564260 TIMP1P01033 207 aa18.75■□□□□ 0.59
RNF40-206ENST00000564260 TXKP42681 527 aa18.75■□□□□ 0.59
RNF40-206ENST00000564260 PLCB4Q15147 1175 aa18.75■□□□□ 0.59
RNF40-206ENST00000564260 XKR3Q5GH77 459 aa18.75■□□□□ 0.59
RNF40-206ENST00000564260 PRPF38BQ5VTL8 546 aaKnown RBP18.75■□□□□ 0.59
RNF40-206ENST00000564260 HAUS3Q68CZ6 603 aa18.75■□□□□ 0.59
RNF40-206ENST00000564260 GDF6Q6KF10 455 aaPredicted RBP18.75■□□□□ 0.59
RNF40-206ENST00000564260 SERINC5Q86VE9 423 aa18.75■□□□□ 0.59
RNF40-206ENST00000564260 C4orf19Q8IY42 314 aa18.75■□□□□ 0.59
RNF40-206ENST00000564260 TMEM60Q9H2L4 133 aa18.75■□□□□ 0.59
RNF40-206ENST00000564260 ZSWIM4Q9H7M6 989 aa18.75■□□□□ 0.59
RNF40-206ENST00000564260 FOXD4L1Q9NU39 408 aa18.75■□□□□ 0.59
RNF40-206ENST00000564260 TRPC6Q9Y210 931 aa18.75■□□□□ 0.59
RNF40-206ENST00000564260 OATP04181 439 aa18.74■□□□□ 0.59
RNF40-206ENST00000564260 ZSCAN22P10073 491 aaPredicted RBP18.74■□□□□ 0.59
RNF40-206ENST00000564260 RAG1P15918 1043 aa18.74■□□□□ 0.59
RNF40-206ENST00000564260 GRIK4Q16099 956 aa18.74■□□□□ 0.59
RNF40-206ENST00000564260 DTHD1Q6ZMT9 781 aa18.74■□□□□ 0.59
RNF40-206ENST00000564260 IGSF22Q8N9C0 903 aa18.74■□□□□ 0.59
RNF40-206ENST00000564260 LMBR1Q8WVP7 490 aa18.74■□□□□ 0.59
RNF40-206ENST00000564260 AK8Q96MA6 479 aa18.74■□□□□ 0.59
RNF40-206ENST00000564260 HSD17B14Q9BPX1 270 aa18.74■□□□□ 0.59
RNF40-206ENST00000564260 TRPV6Q9H1D0 765 aa18.74■□□□□ 0.59
RNF40-206ENST00000564260 HIPK3Q9H422 1215 aa18.74■□□□□ 0.59
RNF40-206ENST00000564260 TRMT13Q9NUP7 481 aaKnown RBP18.74■□□□□ 0.59
RNF40-206ENST00000564260 MAGEB2O15479 319 aa18.73■□□□□ 0.59
RNF40-206ENST00000564260 XRCC6P12956 609 aaKnown RBP eCLIP18.73■□□□□ 0.59
RNF40-206ENST00000564260 INSRRP14616 1297 aa18.73■□□□□ 0.59
RNF40-206ENST00000564260 MARK3P27448 753 aa18.73■□□□□ 0.59
RNF40-206ENST00000564260 RFC2P35250 354 aa18.73■□□□□ 0.59
RNF40-206ENST00000564260 ANP32AP39687 249 aaKnown RBP18.73■□□□□ 0.59
RNF40-206ENST00000564260 PRKCEQ02156 737 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms