RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 IKBKBO14920 756 aa19.66■□□□□ 0.74
GDE1-203ENST00000564172 CYP4A11Q02928 519 aa19.66■□□□□ 0.74
GDE1-203ENST00000564172 SRLQ86TD4 932 aa19.66■□□□□ 0.74
GDE1-203ENST00000564172 IWS1Q96ST2 819 aa19.66■□□□□ 0.74
GDE1-203ENST00000564172 ASTN1O14525 1302 aa19.65■□□□□ 0.74
GDE1-203ENST00000564172 POTEB2H3BUK9 544 aa19.65■□□□□ 0.74
GDE1-203ENST00000564172 MAFGO15525 162 aa19.65■□□□□ 0.74
GDE1-203ENST00000564172 SLITRK3O94933 977 aa19.65■□□□□ 0.74
GDE1-203ENST00000564172 CD44P16070 742 aaKnown RBP19.65■□□□□ 0.74
GDE1-203ENST00000564172 GPS2Q13227 327 aa19.65■□□□□ 0.74
GDE1-203ENST00000564172 SEMA3FQ13275 785 aa19.65■□□□□ 0.74
GDE1-203ENST00000564172 ZNF658Q5TYW1 1059 aaPredicted RBP19.65■□□□□ 0.74
GDE1-203ENST00000564172 SMYD4Q8IYR2 804 aaPredicted RBP19.65■□□□□ 0.74
GDE1-203ENST00000564172 GPRASP2Q96D09 838 aa19.65■□□□□ 0.74
GDE1-203ENST00000564172 PTPN18Q99952 460 aa19.65■□□□□ 0.74
GDE1-203ENST00000564172 LRRC27Q9C0I9 530 aa19.65■□□□□ 0.74
GDE1-203ENST00000564172 TBC1D22BQ9NU19 505 aa19.65■□□□□ 0.74
GDE1-203ENST00000564172 PYCARDQ9ULZ3 195 aa19.65■□□□□ 0.74
GDE1-203ENST00000564172 SUFUQ9UMX1 484 aa19.65■□□□□ 0.74
GDE1-203ENST00000564172 DDX39AO00148 427 aaKnown RBP19.64■□□□□ 0.74
GDE1-203ENST00000564172 ATP9AO75110 1047 aa19.64■□□□□ 0.74
GDE1-203ENST00000564172 RGS20O76081 388 aa19.64■□□□□ 0.74
GDE1-203ENST00000564172 RHOBTB3O94955 611 aa19.64■□□□□ 0.74
GDE1-203ENST00000564172 CALRP27797 417 aaKnown RBP19.64■□□□□ 0.74
GDE1-203ENST00000564172 GYS2P54840 703 aa19.64■□□□□ 0.74
GDE1-203ENST00000564172 PSMC6P62333 389 aa19.64■□□□□ 0.74
GDE1-203ENST00000564172 TPM4P67936 248 aa19.64■□□□□ 0.74
GDE1-203ENST00000564172 ASIC1P78348 528 aa19.64■□□□□ 0.74
GDE1-203ENST00000564172 EPHA7Q15375 998 aa19.64■□□□□ 0.74
GDE1-203ENST00000564172 NLRX1Q86UT6 975 aa19.64■□□□□ 0.74
GDE1-203ENST00000564172 V9GYY5 206 aaPredicted RBP19.64■□□□□ 0.74
GDE1-203ENST00000564172 CCDC189A1A4V9 331 aa19.64■□□□□ 0.73
GDE1-203ENST00000564172 PPP1R3GB7ZBB8 358 aa19.64■□□□□ 0.73
GDE1-203ENST00000564172 STAM2O75886 525 aa19.64■□□□□ 0.73
GDE1-203ENST00000564172 PLA2G4BP0C869 781 aa19.64■□□□□ 0.73
GDE1-203ENST00000564172 MYL5Q02045 173 aa19.64■□□□□ 0.73
GDE1-203ENST00000564172 TTC31Q49AM3 519 aaPredicted RBP19.64■□□□□ 0.73
GDE1-203ENST00000564172 SAPCD2Q86UD0 394 aa19.64■□□□□ 0.73
GDE1-203ENST00000564172 KCTD17Q8N5Z5 321 aa19.64■□□□□ 0.73
GDE1-203ENST00000564172 FAM133AQ8N9E0 248 aa19.64■□□□□ 0.73
GDE1-203ENST00000564172 KCNF1Q9H3M0 494 aa19.64■□□□□ 0.73
GDE1-203ENST00000564172 MROH8Q9H579 483 aa19.64■□□□□ 0.73
GDE1-203ENST00000564172 TUFT1Q9NNX1 390 aa19.64■□□□□ 0.73
GDE1-203ENST00000564172 DNM3Q9UQ16 869 aa19.64■□□□□ 0.73
GDE1-203ENST00000564172 ERCC5P28715 1186 aaPredicted RBP19.63■□□□□ 0.73
GDE1-203ENST00000564172 ALDH5A1P51649 535 aaPredicted RBP19.63■□□□□ 0.73
GDE1-203ENST00000564172 CNNM4Q6P4Q7 775 aa19.63■□□□□ 0.73
GDE1-203ENST00000564172 DYMQ7RTS9 669 aa19.63■□□□□ 0.73
GDE1-203ENST00000564172 DDX12PQ92771 950 aa19.63■□□□□ 0.73
GDE1-203ENST00000564172 DYDC2Q96IM9 177 aa19.63■□□□□ 0.73
GDE1-203ENST00000564172 ADD3Q9UEY8 706 aaKnown RBP19.63■□□□□ 0.73
GDE1-203ENST00000564172 PASKQ96RG2 1323 aa19.63■□□□□ 0.73
GDE1-203ENST00000564172 SOWAHBA6NEL2 793 aa19.63■□□□□ 0.73
GDE1-203ENST00000564172 TRIM66O15016 1216 aa19.63■□□□□ 0.73
GDE1-203ENST00000564172 SSBP05455 408 aaKnown RBP eCLIP19.63■□□□□ 0.73
GDE1-203ENST00000564172 ZNF157P51786 506 aaPredicted RBP19.63■□□□□ 0.73
GDE1-203ENST00000564172 FSTL1Q12841 308 aa19.63■□□□□ 0.73
GDE1-203ENST00000564172 CTTNQ14247 550 aaKnown RBP19.63■□□□□ 0.73
GDE1-203ENST00000564172 STXBP2Q15833 593 aa19.63■□□□□ 0.73
GDE1-203ENST00000564172 SHCBP1Q8NEM2 672 aa19.63■□□□□ 0.73
GDE1-203ENST00000564172 GPRC5AQ8NFJ5 357 aa19.63■□□□□ 0.73
GDE1-203ENST00000564172 RNF217Q8TC41 542 aa19.63■□□□□ 0.73
GDE1-203ENST00000564172 MED15Q96RN5 788 aa19.63■□□□□ 0.73
GDE1-203ENST00000564172 PORCNQ9H237 461 aa19.63■□□□□ 0.73
GDE1-203ENST00000564172 GPBP1L1Q9HC44 474 aaPredicted RBP19.63■□□□□ 0.73
GDE1-203ENST00000564172 GDAQ9Y2T3 454 aa19.63■□□□□ 0.73
GDE1-203ENST00000564172 SH3BP1Q9Y3L3 701 aa19.63■□□□□ 0.73
GDE1-203ENST00000564172 MAGEA9P43362 315 aa19.62■□□□□ 0.73
GDE1-203ENST00000564172 SLC12A3P55017 1021 aa19.62■□□□□ 0.73
GDE1-203ENST00000564172 RASAL3Q86YV0 1011 aa19.62■□□□□ 0.73
GDE1-203ENST00000564172 TPH2Q8IWU9 490 aa19.62■□□□□ 0.73
GDE1-203ENST00000564172 ENOX1Q8TC92 643 aaKnown RBP19.62■□□□□ 0.73
GDE1-203ENST00000564172 CCDC47Q96A33 483 aaKnown RBP19.62■□□□□ 0.73
GDE1-203ENST00000564172 TRPM7Q96QT4 1865 aa19.62■□□□□ 0.73
GDE1-203ENST00000564172 LCTP09848 1927 aa19.62■□□□□ 0.73
GDE1-203ENST00000564172 PVALEFA0A1B0GWK0 134 aa19.61■□□□□ 0.73
GDE1-203ENST00000564172 EIF3JO75822 258 aaKnown RBP19.61■□□□□ 0.73
GDE1-203ENST00000564172 GCLCP48506 637 aaPredicted RBP19.61■□□□□ 0.73
GDE1-203ENST00000564172 PDE4DQ08499 809 aa19.61■□□□□ 0.73
GDE1-203ENST00000564172 KCTD2Q14681 263 aa19.61■□□□□ 0.73
GDE1-203ENST00000564172 UNC13DQ70J99 1090 aa19.61■□□□□ 0.73
GDE1-203ENST00000564172 MIER3Q7Z3K6 550 aa19.61■□□□□ 0.73
GDE1-203ENST00000564172 ANKRD13CQ8N6S4 541 aa19.61■□□□□ 0.73
GDE1-203ENST00000564172 CEP89Q96ST8 783 aa19.61■□□□□ 0.73
GDE1-203ENST00000564172 HSD3B7Q9H2F3 369 aa19.61■□□□□ 0.73
GDE1-203ENST00000564172 EXOC1Q9NV70 894 aa19.61■□□□□ 0.73
GDE1-203ENST00000564172 PPP1R12AO14974 1030 aaPredicted RBP19.61■□□□□ 0.73
GDE1-203ENST00000564172 MUTP22033 750 aa19.61■□□□□ 0.73
GDE1-203ENST00000564172 EDNRBP24530 442 aa19.61■□□□□ 0.73
GDE1-203ENST00000564172 GNPTABQ3T906 1256 aa19.61■□□□□ 0.73
GDE1-203ENST00000564172 WDR78Q5VTH9 848 aa19.61■□□□□ 0.73
GDE1-203ENST00000564172 KLHL10Q6JEL2 608 aa19.61■□□□□ 0.73
GDE1-203ENST00000564172 SYT2Q8N9I0 419 aaPredicted RBP19.61■□□□□ 0.73
GDE1-203ENST00000564172 GIMAP8Q8ND71 665 aaPredicted RBP19.61■□□□□ 0.73
GDE1-203ENST00000564172 DNAJC19Q96DA6 116 aa19.61■□□□□ 0.73
GDE1-203ENST00000564172 ERO1AQ96HE7 468 aa19.61■□□□□ 0.73
GDE1-203ENST00000564172 CDHR1Q96JP9 859 aa19.61■□□□□ 0.73
GDE1-203ENST00000564172 MMP19Q99542 508 aa19.61■□□□□ 0.73
GDE1-203ENST00000564172 BMP2KQ9NSY1 1161 aaPredicted RBP19.61■□□□□ 0.73
GDE1-203ENST00000564172 DNAJC25-GNG10A0A024R161 153 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms