RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 MUC6Q6W4X9 2439 aa21.44■■□□□ 1.02
NME3-204ENST00000563498 GRM6O15303 877 aa21.44■■□□□ 1.02
NME3-204ENST00000563498 MTMR1Q13613 665 aa21.44■■□□□ 1.02
NME3-204ENST00000563498 BTG3Q14201 252 aaPredicted RBP21.44■■□□□ 1.02
NME3-204ENST00000563498 CASC1Q6TDU7 716 aa21.44■■□□□ 1.02
NME3-204ENST00000563498 DNAJB3Q8WWF6 145 aa21.44■■□□□ 1.02
NME3-204ENST00000563498 GLG1Q92896 1179 aa21.44■■□□□ 1.02
NME3-204ENST00000563498 ATG2AQ2TAZ0 1938 aa21.43■■□□□ 1.02
NME3-204ENST00000563498 DGKIO75912 1065 aa21.43■■□□□ 1.02
NME3-204ENST00000563498 MMP1P03956 469 aa21.43■■□□□ 1.02
NME3-204ENST00000563498 MARK3P27448 753 aa21.43■■□□□ 1.02
NME3-204ENST00000563498 HYAL1Q12794 435 aa21.43■■□□□ 1.02
NME3-204ENST00000563498 SMAD2Q15796 467 aaKnown RBP21.43■■□□□ 1.02
NME3-204ENST00000563498 SRBD1Q8N5C6 995 aaKnown RBP21.43■■□□□ 1.02
NME3-204ENST00000563498 UPF3BQ9BZI7 483 aaKnown RBP21.43■■□□□ 1.02
NME3-204ENST00000563498 CDY2AQ9Y6F7 541 aa21.43■■□□□ 1.02
NME3-204ENST00000563498 TTC3P53804 2025 aa21.43■■□□□ 1.02
NME3-204ENST00000563498 RRN3P2A6NIE6 340 aa21.42■■□□□ 1.02
NME3-204ENST00000563498 PLEKHA8P1O95397 391 aa21.42■■□□□ 1.02
NME3-204ENST00000563498 CALM1P0DP23 149 aa21.42■■□□□ 1.02
NME3-204ENST00000563498 CALM2P0DP24 149 aa21.42■■□□□ 1.02
NME3-204ENST00000563498 CALM3P0DP25 149 aa21.42■■□□□ 1.02
NME3-204ENST00000563498 MRPS6P82932 125 aaKnown RBP21.42■■□□□ 1.02
NME3-204ENST00000563498 IER5Q5VY09 327 aa21.42■■□□□ 1.02
NME3-204ENST00000563498 CRIPAKQ8N1N5 446 aa21.42■■□□□ 1.02
NME3-204ENST00000563498 PIEZO1Q92508 2521 aa21.42■■□□□ 1.02
NME3-204ENST00000563498 P2RX5Q93086 422 aa21.42■■□□□ 1.02
NME3-204ENST00000563498 TMEM87BQ96K49 555 aa21.42■■□□□ 1.02
NME3-204ENST00000563498 POP1Q99575 1024 aaKnown RBP21.42■■□□□ 1.02
NME3-204ENST00000563498 FTHL17Q9BXU8 183 aa21.42■■□□□ 1.02
NME3-204ENST00000563498 KCNH6Q9H252 994 aa21.42■■□□□ 1.02
NME3-204ENST00000563498 JADE2Q9NQC1 790 aa21.42■■□□□ 1.02
NME3-204ENST00000563498 RBM8AQ9Y5S9 174 aaKnown RBP21.42■■□□□ 1.02
NME3-204ENST00000563498 SPDYE3A6NKU9 549 aa21.41■■□□□ 1.02
NME3-204ENST00000563498 PRC1O43663 620 aa21.41■■□□□ 1.02
NME3-204ENST00000563498 MCM5P33992 734 aa21.41■■□□□ 1.02
NME3-204ENST00000563498 NAALADL2Q58DX5 795 aa21.41■■□□□ 1.02
NME3-204ENST00000563498 TNPO1Q92973 898 aaKnown RBP21.41■■□□□ 1.02
NME3-204ENST00000563498 UIMC1Q96RL1 719 aa21.41■■□□□ 1.02
NME3-204ENST00000563498 AGO3Q9H9G7 860 aaKnown RBP21.41■■□□□ 1.02
NME3-204ENST00000563498 CCDC69A6NI79 296 aa21.4■■□□□ 1.02
NME3-204ENST00000563498 SH2B2O14492 632 aaPredicted RBP21.4■■□□□ 1.02
NME3-204ENST00000563498 MBTPS2O43462 519 aa21.4■■□□□ 1.02
NME3-204ENST00000563498 INSRRP14616 1297 aa21.4■■□□□ 1.02
NME3-204ENST00000563498 IRS1P35568 1242 aa21.4■■□□□ 1.02
NME3-204ENST00000563498 LIFRP42702 1097 aa21.4■■□□□ 1.02
NME3-204ENST00000563498 DLX2Q07687 328 aaPredicted RBP21.4■■□□□ 1.02
NME3-204ENST00000563498 SMAD4Q13485 552 aaKnown RBP21.4■■□□□ 1.02
NME3-204ENST00000563498 NFXL1Q6ZNB6 911 aa21.4■■□□□ 1.02
NME3-204ENST00000563498 CMTR2Q8IYT2 770 aaKnown RBP21.4■■□□□ 1.02
NME3-204ENST00000563498 LINC01599Q8WXQ3 324 aa21.4■■□□□ 1.02
NME3-204ENST00000563498 JPH1Q9HDC5 661 aaPredicted RBP21.4■■□□□ 1.02
NME3-204ENST00000563498 PLAGL2Q9UPG8 496 aa21.4■■□□□ 1.02
NME3-204ENST00000563498 MYO7AQ13402 2215 aa21.4■■□□□ 1.02
NME3-204ENST00000563498 CD52P31358 61 aa21.39■■□□□ 1.01
NME3-204ENST00000563498 CAMK1Q14012 370 aa21.39■■□□□ 1.01
NME3-204ENST00000563498 UBE2SQ16763 222 aa21.39■■□□□ 1.01
NME3-204ENST00000563498 FAM43BQ6ZT52 329 aaPredicted RBP21.39■■□□□ 1.01
NME3-204ENST00000563498 NPAS4Q8IUM7 802 aa21.39■■□□□ 1.01
NME3-204ENST00000563498 TEX2Q8IWB9 1127 aa21.39■■□□□ 1.01
NME3-204ENST00000563498 CMTR1Q8N1G2 835 aaKnown RBP21.39■■□□□ 1.01
NME3-204ENST00000563498 PPP2R3CQ969Q6 453 aa21.39■■□□□ 1.01
NME3-204ENST00000563498 PCYT2Q99447 389 aa21.39■■□□□ 1.01
NME3-204ENST00000563498 AZI2Q9H6S1 392 aa21.39■■□□□ 1.01
NME3-204ENST00000563498 PKD2L1Q9P0L9 805 aa21.39■■□□□ 1.01
NME3-204ENST00000563498 PCDHA6Q9UN73 950 aa21.39■■□□□ 1.01
NME3-204ENST00000563498 PCDHA8Q9Y5H6 950 aa21.39■■□□□ 1.01
NME3-204ENST00000563498 M0QZ92 97 aa21.38■■□□□ 1.01
NME3-204ENST00000563498 TBX10O75333 385 aa21.38■■□□□ 1.01
NME3-204ENST00000563498 IGBP1P78318 339 aa21.38■■□□□ 1.01
NME3-204ENST00000563498 ADAM15Q13444 863 aa21.38■■□□□ 1.01
NME3-204ENST00000563498 RTN4RL1Q86UN2 441 aaPredicted RBP21.38■■□□□ 1.01
NME3-204ENST00000563498 FAM49AQ9H0Q0 323 aaPredicted RBP21.38■■□□□ 1.01
NME3-204ENST00000563498 ALG13Q9NP73 1137 aaKnown RBP21.38■■□□□ 1.01
NME3-204ENST00000563498 SLC9A2Q9UBY0 812 aa21.38■■□□□ 1.01
NME3-204ENST00000563498 PCDHA2Q9Y5H9 948 aa21.38■■□□□ 1.01
NME3-204ENST00000563498 TRPV2Q9Y5S1 764 aa21.38■■□□□ 1.01
NME3-204ENST00000563498 MRPL42Q9Y6G3 142 aaKnown RBP21.38■■□□□ 1.01
NME3-204ENST00000563498 IGSF9BQ9UPX0 1349 aa21.37■■□□□ 1.01
NME3-204ENST00000563498 STAG3L1P0CL83 205 aa21.37■■□□□ 1.01
NME3-204ENST00000563498 CLUL1Q15846 466 aa21.37■■□□□ 1.01
NME3-204ENST00000563498 PLPPR4Q7Z2D5 763 aa21.37■■□□□ 1.01
NME3-204ENST00000563498 KCNH7Q9NS40 1196 aa21.37■■□□□ 1.01
NME3-204ENST00000563498 CD207Q9UJ71 328 aa21.37■■□□□ 1.01
NME3-204ENST00000563498 PADI3Q9ULW8 664 aa21.37■■□□□ 1.01
NME3-204ENST00000563498 SLC12A7Q9Y666 1083 aa21.37■■□□□ 1.01
NME3-204ENST00000563498 NFASCO94856 1347 aa21.36■■□□□ 1.01
NME3-204ENST00000563498 KDM3AQ9Y4C1 1321 aa21.36■■□□□ 1.01
NME3-204ENST00000563498 RXRAP19793 462 aa21.36■■□□□ 1.01
NME3-204ENST00000563498 GTF2F1P35269 517 aaKnown RBP eCLIP21.36■■□□□ 1.014e-7■■■□□ 18.9
NME3-204ENST00000563498 HERC4Q5GLZ8 1057 aaPredicted RBP21.36■■□□□ 1.01
NME3-204ENST00000563498 TMTC3Q6ZXV5 915 aa21.36■■□□□ 1.01
NME3-204ENST00000563498 NME8Q8N427 588 aa21.36■■□□□ 1.01
NME3-204ENST00000563498 FANCBQ8NB91 859 aa21.36■■□□□ 1.01
NME3-204ENST00000563498 ZBTB10Q96DT7 871 aa21.36■■□□□ 1.01
NME3-204ENST00000563498 MSLNLQ96KJ4 702 aa21.36■■□□□ 1.01
NME3-204ENST00000563498 MXRA8Q9BRK3 442 aa21.36■■□□□ 1.01
NME3-204ENST00000563498 SDF4Q9BRK5 362 aa21.36■■□□□ 1.01
NME3-204ENST00000563498 IGFLR1Q9H665 355 aa21.36■■□□□ 1.01
NME3-204ENST00000563498 TRPC6Q9Y210 931 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms