RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 ST6GALNAC2Q9UJ37 374 aa5.19□□□□□ -1.58
HMGB1P33-201ENST00000563485 ADAM29Q9UKF5 820 aa5.19□□□□□ -1.58
HMGB1P33-201ENST00000563485 KCNK3O14649 394 aa5.18□□□□□ -1.58
HMGB1P33-201ENST00000563485 CRTAMO95727 393 aa5.18□□□□□ -1.58
HMGB1P33-201ENST00000563485 CHGBP05060 677 aa5.18□□□□□ -1.58
HMGB1P33-201ENST00000563485 KRT15P19012 456 aa5.18□□□□□ -1.58
HMGB1P33-201ENST00000563485 EPHB4P54760 987 aa5.18□□□□□ -1.58
HMGB1P33-201ENST00000563485 PPP2CBP62714 309 aa5.18□□□□□ -1.58
HMGB1P33-201ENST00000563485 PPP2CAP67775 309 aa5.18□□□□□ -1.58
HMGB1P33-201ENST00000563485 DBPQ10586 325 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P33-201ENST00000563485 LONRF2Q1L5Z9 754 aa5.18□□□□□ -1.58
HMGB1P33-201ENST00000563485 ZXDCQ2QGD7 858 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P33-201ENST00000563485 ARHGEF18Q6ZSZ5 1173 aa5.18□□□□□ -1.58
HMGB1P33-201ENST00000563485 C16orf59Q7L2K0 433 aa5.18□□□□□ -1.58
HMGB1P33-201ENST00000563485 GPR155Q7Z3F1 870 aa5.18□□□□□ -1.58
HMGB1P33-201ENST00000563485 OSTM1Q86WC4 334 aa5.18□□□□□ -1.58
HMGB1P33-201ENST00000563485 SRPK1Q96SB4 655 aaKnown RBP5.18□□□□□ -1.58
HMGB1P33-201ENST00000563485 PTPN18Q99952 460 aa5.18□□□□□ -1.58
HMGB1P33-201ENST00000563485 SLC52A2Q9HAB3 445 aa5.18□□□□□ -1.58
HMGB1P33-201ENST00000563485 NDOR1Q9UHB4 597 aa5.18□□□□□ -1.58
HMGB1P33-201ENST00000563485 CCDC66A2RUB6 948 aa5.17□□□□□ -1.58
HMGB1P33-201ENST00000563485 NPEPPSL1A6NEC2 478 aa5.17□□□□□ -1.58
HMGB1P33-201ENST00000563485 GPR42O15529 346 aa5.17□□□□□ -1.58
HMGB1P33-201ENST00000563485 ZNF20P17024 532 aa5.17□□□□□ -1.58
HMGB1P33-201ENST00000563485 CSF2RBP32927 897 aa5.17□□□□□ -1.58
HMGB1P33-201ENST00000563485 DNM2P50570 870 aa5.17□□□□□ -1.58
HMGB1P33-201ENST00000563485 JAM2P57087 298 aa5.17□□□□□ -1.58
HMGB1P33-201ENST00000563485 ST5P78524 1137 aa5.17□□□□□ -1.58
HMGB1P33-201ENST00000563485 PUM1Q14671 1186 aaKnown RBP eCLIP5.17□□□□□ -1.58
HMGB1P33-201ENST00000563485 ICAM4Q14773 271 aa5.17□□□□□ -1.58
HMGB1P33-201ENST00000563485 FIGNQ5HY92 759 aa5.17□□□□□ -1.58
HMGB1P33-201ENST00000563485 LRP10Q7Z4F1 713 aa5.17□□□□□ -1.58
HMGB1P33-201ENST00000563485 RALYLQ86SE5 291 aaKnown RBP5.17□□□□□ -1.58
HMGB1P33-201ENST00000563485 ZC3H7AQ8IWR0 971 aaKnown RBP5.17□□□□□ -1.58
HMGB1P33-201ENST00000563485 NLGN4XQ8N0W4 816 aa5.17□□□□□ -1.58
HMGB1P33-201ENST00000563485 CHST13Q8NET6 341 aa5.17□□□□□ -1.58
HMGB1P33-201ENST00000563485 AJUBAQ96IF1 538 aa5.17□□□□□ -1.58
HMGB1P33-201ENST00000563485 DNAJC7Q99615 494 aa5.17□□□□□ -1.58
HMGB1P33-201ENST00000563485 MEGF9Q9H1U4 602 aa5.17□□□□□ -1.58
HMGB1P33-201ENST00000563485 SMURF1Q9HCE7 757 aa5.17□□□□□ -1.58
HMGB1P33-201ENST00000563485 JADE2Q9NQC1 790 aa5.17□□□□□ -1.58
HMGB1P33-201ENST00000563485 ATP23Q9Y6H3 246 aa5.17□□□□□ -1.58
HMGB1P33-201ENST00000563485 H0Y858 1186 aa5.16□□□□□ -1.58
HMGB1P33-201ENST00000563485 ZNF561-AS1K7EIQ3 104 aa5.16□□□□□ -1.58
HMGB1P33-201ENST00000563485 RASGRP1O95267 797 aa5.16□□□□□ -1.58
HMGB1P33-201ENST00000563485 NAT1P18440 290 aa5.16□□□□□ -1.58
HMGB1P33-201ENST00000563485 CRY1Q16526 586 aa5.16□□□□□ -1.58
HMGB1P33-201ENST00000563485 CPZQ66K79 652 aa5.16□□□□□ -1.58
HMGB1P33-201ENST00000563485 CISD2Q8N5K1 135 aaKnown RBP5.16□□□□□ -1.58
HMGB1P33-201ENST00000563485 PMFBP1Q8TBY8 1022 aa5.16□□□□□ -1.58
HMGB1P33-201ENST00000563485 ARHGAP28Q9P2N2 729 aa5.16□□□□□ -1.58
HMGB1P33-201ENST00000563485 MYRFQ9Y2G1 1151 aa5.16□□□□□ -1.58
HMGB1P33-201ENST00000563485 PTPN22Q9Y2R2 807 aa5.16□□□□□ -1.58
HMGB1P33-201ENST00000563485 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P33-201ENST00000563485 PRAMEF25A6NGN4 478 aa5.15□□□□□ -1.59
HMGB1P33-201ENST00000563485 CNOT4O95628 575 aaKnown RBP5.15□□□□□ -1.59
HMGB1P33-201ENST00000563485 C4BPAP04003 597 aaKnown RBP5.15□□□□□ -1.59
HMGB1P33-201ENST00000563485 GJA4P35212 333 aa5.15□□□□□ -1.59
HMGB1P33-201ENST00000563485 FAM47CQ5HY64 1035 aa5.15□□□□□ -1.59
HMGB1P33-201ENST00000563485 EP400NLQ6ZTU2 488 aa5.15□□□□□ -1.59
HMGB1P33-201ENST00000563485 CIR1Q86X95 450 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P33-201ENST00000563485 GSTCDQ8NEC7 633 aa5.15□□□□□ -1.59
HMGB1P33-201ENST00000563485 SLC7A14Q8TBB6 771 aa5.15□□□□□ -1.59
HMGB1P33-201ENST00000563485 C1QTNF3Q9BXJ4 246 aa5.15□□□□□ -1.59
HMGB1P33-201ENST00000563485 COQ6Q9Y2Z9 468 aa5.15□□□□□ -1.59
HMGB1P33-201ENST00000563485 GSTA4O15217 222 aa5.14□□□□□ -1.59
HMGB1P33-201ENST00000563485 ZNF888P0CJ79 500 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P33-201ENST00000563485 MC4RP32245 332 aa5.14□□□□□ -1.59
HMGB1P33-201ENST00000563485 TRIM61Q5EBN2 209 aa5.14□□□□□ -1.59
HMGB1P33-201ENST00000563485 ZC3H12BQ5HYM0 836 aaKnown RBP5.14□□□□□ -1.59
HMGB1P33-201ENST00000563485 SLFN13Q68D06 897 aa5.14□□□□□ -1.59
HMGB1P33-201ENST00000563485 FSTL4Q6MZW2 842 aa5.14□□□□□ -1.59
HMGB1P33-201ENST00000563485 REXO1L1PQ8IX06 675 aa5.14□□□□□ -1.59
HMGB1P33-201ENST00000563485 JMYQ8N9B5 988 aa5.14□□□□□ -1.59
HMGB1P33-201ENST00000563485 DVL3Q92997 716 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P33-201ENST00000563485 MKL1Q969V6 931 aa5.14□□□□□ -1.59
HMGB1P33-201ENST00000563485 SCLYQ96I15 445 aa5.14□□□□□ -1.59
HMGB1P33-201ENST00000563485 KATNBL1Q9H079 304 aa5.14□□□□□ -1.59
HMGB1P33-201ENST00000563485 CD248Q9HCU0 757 aa5.14□□□□□ -1.59
HMGB1P33-201ENST00000563485 SLC4A7Q9Y6M7 1214 aa5.14□□□□□ -1.59
HMGB1P33-201ENST00000563485 ESYT3A0FGR9 886 aa5.13□□□□□ -1.59
HMGB1P33-201ENST00000563485 MATN3O15232 486 aa5.13□□□□□ -1.59
HMGB1P33-201ENST00000563485 EFCAB14O75071 495 aa5.13□□□□□ -1.59
HMGB1P33-201ENST00000563485 CLASP2O75122 1294 aaKnown RBP5.13□□□□□ -1.59
HMGB1P33-201ENST00000563485 PTGS1P23219 599 aa5.13□□□□□ -1.59
HMGB1P33-201ENST00000563485 AOAHP28039 575 aa5.13□□□□□ -1.59
HMGB1P33-201ENST00000563485 LACTBP83111 547 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P33-201ENST00000563485 TOP3AQ13472 1001 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P33-201ENST00000563485 SEC23AQ15436 765 aa5.13□□□□□ -1.59
HMGB1P33-201ENST00000563485 SF3A1Q15459 793 aaKnown RBP5.13□□□□□ -1.59
HMGB1P33-201ENST00000563485 CDSNQ15517 529 aa5.13□□□□□ -1.59
HMGB1P33-201ENST00000563485 TM4SF20Q53R12 229 aa5.13□□□□□ -1.59
HMGB1P33-201ENST00000563485 NOSTRINQ8IVI9 506 aa5.13□□□□□ -1.59
HMGB1P33-201ENST00000563485 DNERQ8NFT8 737 aa5.13□□□□□ -1.59
HMGB1P33-201ENST00000563485 INCENPQ9NQS7 918 aa5.13□□□□□ -1.59
HMGB1P33-201ENST00000563485 BTBD7Q9P203 1132 aa5.13□□□□□ -1.59
HMGB1P33-201ENST00000563485 SFMBT1Q9UHJ3 866 aa5.13□□□□□ -1.59
HMGB1P33-201ENST00000563485 PTCH2Q9Y6C5 1203 aa5.13□□□□□ -1.59
HMGB1P33-201ENST00000563485 PATE3B3GLJ2 98 aa5.12□□□□□ -1.59
HMGB1P33-201ENST00000563485 C1QTNF3-AMACRE9PGA6 284 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms