RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 MMP19Q99542 508 aa20.07■□□□□ 0.8
COMMD4-208ENST00000563220 REEP2Q9BRK0 252 aa20.07■□□□□ 0.8
COMMD4-208ENST00000563220 ZSWIM4Q9H7M6 989 aa20.07■□□□□ 0.8
COMMD4-208ENST00000563220 ADD3Q9UEY8 706 aaKnown RBP20.07■□□□□ 0.8
COMMD4-208ENST00000563220 TELO2Q9Y4R8 837 aa20.07■□□□□ 0.8
COMMD4-208ENST00000563220 DNAJC25-GNG10A0A024R161 153 aa20.07■□□□□ 0.8
COMMD4-208ENST00000563220 LRRC41Q15345 812 aa20.07■□□□□ 0.8
COMMD4-208ENST00000563220 CCDC144BQ3MJ40 725 aa20.07■□□□□ 0.8
COMMD4-208ENST00000563220 HERC4Q5GLZ8 1057 aaPredicted RBP20.07■□□□□ 0.8
COMMD4-208ENST00000563220 WDR78Q5VTH9 848 aa20.07■□□□□ 0.8
COMMD4-208ENST00000563220 C1orf186Q6ZWK4 172 aa20.07■□□□□ 0.8
COMMD4-208ENST00000563220 APTXQ7Z2E3 356 aaKnown RBP20.07■□□□□ 0.8
COMMD4-208ENST00000563220 SHCBP1Q8NEM2 672 aa20.07■□□□□ 0.8
COMMD4-208ENST00000563220 P2RX5Q93086 422 aa20.07■□□□□ 0.8
COMMD4-208ENST00000563220 SENP7Q9BQF6 1050 aa20.07■□□□□ 0.8
COMMD4-208ENST00000563220 FGFBP2Q9BYJ0 223 aa20.07■□□□□ 0.8
COMMD4-208ENST00000563220 POLD4Q9HCU8 107 aa20.07■□□□□ 0.8
COMMD4-208ENST00000563220 WDR64B1ANS9 1081 aa20.06■□□□□ 0.8
COMMD4-208ENST00000563220 ICAM3P32942 547 aa20.06■□□□□ 0.8
COMMD4-208ENST00000563220 PPP1R2P41236 205 aa20.06■□□□□ 0.8
COMMD4-208ENST00000563220 QARSP47897 775 aaKnown RBP20.06■□□□□ 0.8
COMMD4-208ENST00000563220 JAK3P52333 1124 aa20.06■□□□□ 0.8
COMMD4-208ENST00000563220 KCTD2Q14681 263 aa20.06■□□□□ 0.8
COMMD4-208ENST00000563220 UGCGQ16739 394 aa20.06■□□□□ 0.8
COMMD4-208ENST00000563220 FAM26FQ5R3K3 315 aa20.06■□□□□ 0.8
COMMD4-208ENST00000563220 ANKRD40Q6AI12 368 aa20.06■□□□□ 0.8
COMMD4-208ENST00000563220 ZNF746Q6NUN9 644 aaPredicted RBP20.06■□□□□ 0.8
COMMD4-208ENST00000563220 SEPT14Q6ZU15 432 aa20.06■□□□□ 0.8
COMMD4-208ENST00000563220 CCDC186Q7Z3E2 898 aa20.06■□□□□ 0.8
COMMD4-208ENST00000563220 DUSP9Q99956 384 aaKnown RBP20.06■□□□□ 0.8
COMMD4-208ENST00000563220 SEMA6BQ9H3T3 888 aa20.06■□□□□ 0.8
COMMD4-208ENST00000563220 INTS13Q9NVM9 706 aa20.06■□□□□ 0.8
COMMD4-208ENST00000563220 TBC1D7Q9P0N9 293 aa20.06■□□□□ 0.8
COMMD4-208ENST00000563220 NFASCO94856 1347 aa20.06■□□□□ 0.8
COMMD4-208ENST00000563220 RSPH10B2B2RC85 870 aa20.05■□□□□ 0.8
COMMD4-208ENST00000563220 RSPH10BP0C881 870 aa20.05■□□□□ 0.8
COMMD4-208ENST00000563220 SFNP31947 248 aa20.05■□□□□ 0.8
COMMD4-208ENST00000563220 IRF2BP1Q8IU81 584 aa20.05■□□□□ 0.8
COMMD4-208ENST00000563220 GUF1Q8N442 669 aaKnown RBP20.05■□□□□ 0.8
COMMD4-208ENST00000563220 ZHX3Q9H4I2 956 aa20.05■□□□□ 0.8
COMMD4-208ENST00000563220 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.05■□□□□ 0.8
COMMD4-208ENST00000563220 GOLGA6L6A8MZA4 724 aa20.05■□□□□ 0.8
COMMD4-208ENST00000563220 CBFA2T2O43439 604 aa20.05■□□□□ 0.8
COMMD4-208ENST00000563220 LYPLA2O95372 231 aa20.05■□□□□ 0.8
COMMD4-208ENST00000563220 CENPPQ6IPU0 288 aa20.05■□□□□ 0.8
COMMD4-208ENST00000563220 SORBS3O60504 671 aa20.04■□□□□ 0.8
COMMD4-208ENST00000563220 PTGS1P23219 599 aa20.04■□□□□ 0.8
COMMD4-208ENST00000563220 GCLCP48506 637 aaPredicted RBP20.04■□□□□ 0.8
COMMD4-208ENST00000563220 ZNF157P51786 506 aaPredicted RBP20.04■□□□□ 0.8
COMMD4-208ENST00000563220 RASAL3Q86YV0 1011 aa20.04■□□□□ 0.8
COMMD4-208ENST00000563220 RDM1Q8NG50 284 aa20.04■□□□□ 0.8
COMMD4-208ENST00000563220 SRRTQ9BXP5 876 aaKnown RBP20.04■□□□□ 0.8
COMMD4-208ENST00000563220 JPH1Q9HDC5 661 aaPredicted RBP20.04■□□□□ 0.8
COMMD4-208ENST00000563220 MORF4L1Q9UBU8 362 aa20.04■□□□□ 0.8
COMMD4-208ENST00000563220 TCEAL9Q9UHQ7 104 aa20.04■□□□□ 0.8
COMMD4-208ENST00000563220 PCDHA10Q9Y5I2 948 aa20.04■□□□□ 0.8
COMMD4-208ENST00000563220 PSMC5P62195 406 aa20.03■□□□□ 0.8
COMMD4-208ENST00000563220 CCNA1P78396 465 aa20.03■□□□□ 0.8
COMMD4-208ENST00000563220 PTPN21Q16825 1174 aa20.03■□□□□ 0.8
COMMD4-208ENST00000563220 SAPCD2Q86UD0 394 aa20.03■□□□□ 0.8
COMMD4-208ENST00000563220 C4orf19Q8IY42 314 aa20.03■□□□□ 0.8
COMMD4-208ENST00000563220 TRIM47Q96LD4 638 aa20.03■□□□□ 0.8
COMMD4-208ENST00000563220 SLC9A2Q9UBY0 812 aa20.03■□□□□ 0.8
COMMD4-208ENST00000563220 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.03■□□□□ 0.8
COMMD4-208ENST00000563220 BICDL2A1A5D9 508 aa20.03■□□□□ 0.8
COMMD4-208ENST00000563220 NR1I3Q14994 352 aa20.03■□□□□ 0.8
COMMD4-208ENST00000563220 EEPD1Q7L9B9 569 aa20.03■□□□□ 0.8
COMMD4-208ENST00000563220 FILIP1Q7Z7B0 1213 aa20.03■□□□□ 0.8
COMMD4-208ENST00000563220 SFR1Q86XK3 245 aa20.03■□□□□ 0.8
COMMD4-208ENST00000563220 PASKQ96RG2 1323 aa20.02■□□□□ 0.8
COMMD4-208ENST00000563220 A0A1B0GTH6 734 aa20.02■□□□□ 0.8
COMMD4-208ENST00000563220 ARHGEF35A5YM69 484 aa20.02■□□□□ 0.8
COMMD4-208ENST00000563220 LRRC10BA6NIK2 292 aa20.02■□□□□ 0.8
COMMD4-208ENST00000563220 SFI1A8K8P3 1242 aa20.02■□□□□ 0.8
COMMD4-208ENST00000563220 SP4Q02446 784 aa20.02■□□□□ 0.8
COMMD4-208ENST00000563220 TCP11X2Q5H9J9 407 aa20.02■□□□□ 0.8
COMMD4-208ENST00000563220 CYFIP1Q7L576 1253 aa20.02■□□□□ 0.8
COMMD4-208ENST00000563220 TMC6Q7Z403 805 aa20.02■□□□□ 0.8
COMMD4-208ENST00000563220 SMAP1Q8IYB5 467 aaPredicted RBP20.02■□□□□ 0.8
COMMD4-208ENST00000563220 MYOCDQ8IZQ8 938 aa20.02■□□□□ 0.8
COMMD4-208ENST00000563220 CSGALNACT2Q8N6G5 542 aa20.02■□□□□ 0.8
COMMD4-208ENST00000563220 PARK7Q99497 189 aaKnown RBP20.02■□□□□ 0.8
COMMD4-208ENST00000563220 KCNF1Q9H3M0 494 aa20.02■□□□□ 0.8
COMMD4-208ENST00000563220 LIMA1Q9UHB6 759 aaKnown RBP20.02■□□□□ 0.8
COMMD4-208ENST00000563220 DBR1Q9UK59 544 aaKnown RBP20.02■□□□□ 0.8
COMMD4-208ENST00000563220 TMEM150BA6NC51 233 aa20.01■□□□□ 0.79
COMMD4-208ENST00000563220 KCNJ18B7U540 433 aa20.01■□□□□ 0.79
COMMD4-208ENST00000563220 YWHABP31946 246 aaKnown RBP20.01■□□□□ 0.79
COMMD4-208ENST00000563220 RARRES1P49788 294 aa20.01■□□□□ 0.79
COMMD4-208ENST00000563220 ACTR2P61160 394 aa20.01■□□□□ 0.79
COMMD4-208ENST00000563220 KCNJ12Q14500 433 aa20.01■□□□□ 0.79
COMMD4-208ENST00000563220 KRT31Q15323 416 aa20.01■□□□□ 0.79
COMMD4-208ENST00000563220 ABHD15Q6UXT9 468 aa20.01■□□□□ 0.79
COMMD4-208ENST00000563220 SCFD1Q8WVM8 642 aa20.01■□□□□ 0.79
COMMD4-208ENST00000563220 EEF2KMTQ96G04 330 aa20.01■□□□□ 0.79
COMMD4-208ENST00000563220 THAP9Q9H5L6 903 aa20.01■□□□□ 0.79
COMMD4-208ENST00000563220 KCND2Q9NZV8 630 aa20.01■□□□□ 0.79
COMMD4-208ENST00000563220 ZKSCAN5Q9Y2L8 839 aa20.01■□□□□ 0.79
COMMD4-208ENST00000563220 B4DLN1 442 aa20.01■□□□□ 0.79
COMMD4-208ENST00000563220 TBCAO75347 108 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms