RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 PRAMEF25A6NGN4 478 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 FAM90A27PA6NNH2 459 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 BTBD11A6QL63 1104 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 M0R2C6 588 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 MAFGO15525 162 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 GAS7O60861 476 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 LTFP02788 710 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 JMJD7P0C870 316 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 BMP7P18075 431 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 FNTBP49356 437 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 NEK4P51957 841 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 SLURP1P55000 103 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 GJA9P57773 515 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 IRF9Q00978 393 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 ADAM9Q13443 819 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 SMAD4Q13485 552 aaKnown RBP4.25□□□□□ -1.73
CHD9-207ENST00000562806 SART3Q15020 963 aaKnown RBP4.25□□□□□ -1.73
CHD9-207ENST00000562806 SMAD2Q15796 467 aaKnown RBP4.25□□□□□ -1.73
CHD9-207ENST00000562806 FBLN7Q53RD9 439 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 PRR31Q5SQ13 230 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 PIK3R6Q5UE93 754 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 CDCA2Q69YH5 1023 aaPredicted RBP4.25□□□□□ -1.73
CHD9-207ENST00000562806 BORAQ6PGQ7 559 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 LCNL1Q6ZST4 164 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 PLEKHH3Q7Z736 793 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 LRRTM3Q86VH5 581 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 PASD1Q8IV76 773 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 ZZZ3Q8IYH5 903 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 CALML6Q8TD86 181 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 DDX1Q92499 740 aaKnown RBP4.25□□□□□ -1.73
CHD9-207ENST00000562806 DLG3Q92796 817 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 TMEM168Q9H0V1 697 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 IFT57Q9NWB7 429 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 SPATA6Q9NWH7 488 aaPredicted RBP4.25□□□□□ -1.73
CHD9-207ENST00000562806 B4GALT6Q9UBX8 382 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 TELO2Q9Y4R8 837 aa4.25□□□□□ -1.73
CHD9-207ENST00000562806 ACOT7O00154 380 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 CBX4O00257 560 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 SCDO00767 359 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 FOXP2O15409 715 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 CUTAO60888 179 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 C4BPAP04003 597 aaKnown RBP4.24□□□□□ -1.73
CHD9-207ENST00000562806 ZNF28P17035 718 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 PTGS1P23219 599 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 AOAHP28039 575 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 IL13P35225 146 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 MECP2P51608 486 aaKnown RBP4.24□□□□□ -1.73
CHD9-207ENST00000562806 PFKPQ01813 784 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 DLX2Q07687 328 aaPredicted RBP4.24□□□□□ -1.73
CHD9-207ENST00000562806 ADCY1Q08828 1119 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 SURF1Q15526 300 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 SKIDA1Q1XH10 827 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 TM4SF20Q53R12 229 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 DALRD3Q5D0E6 543 aaKnown RBP4.24□□□□□ -1.73
CHD9-207ENST00000562806 PKN3Q6P5Z2 889 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 ABHD17CQ6PCB6 329 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 TMC5Q6UXY8 1006 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 FRMD5Q7Z6J6 570 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 PROSER1Q86XN7 944 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 NOSTRINQ8IVI9 506 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 RBM12BQ8IXT5 1001 aaKnown RBP4.24□□□□□ -1.73
CHD9-207ENST00000562806 ADAMTS17Q8TE56 1095 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 ZNF526Q8TF50 670 aaPredicted RBP4.24□□□□□ -1.73
CHD9-207ENST00000562806 LCORQ96JN0 433 aaPredicted RBP4.24□□□□□ -1.73
CHD9-207ENST00000562806 KCNC2Q96PR1 638 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 PCIF1Q9H4Z3 704 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 BARX1Q9HBU1 254 aaPredicted RBP4.24□□□□□ -1.73
CHD9-207ENST00000562806 PARD6AQ9NPB6 346 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 USP40Q9NVE5 1235 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 GALNT8Q9NY28 637 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 MAPRE3Q9UPY8 281 aa4.24□□□□□ -1.73
CHD9-207ENST00000562806 PTPDC1A2A3K4 754 aa4.23□□□□□ -1.73
CHD9-207ENST00000562806 GLRX3O76003 335 aaKnown RBP4.23□□□□□ -1.73
CHD9-207ENST00000562806 CYP1A1P04798 512 aaPredicted RBP4.23□□□□□ -1.73
CHD9-207ENST00000562806 SDSP20132 328 aa4.23□□□□□ -1.73
CHD9-207ENST00000562806 SCNN1BP51168 640 aa4.23□□□□□ -1.73
CHD9-207ENST00000562806 TKFCQ3LXA3 575 aa4.23□□□□□ -1.73
CHD9-207ENST00000562806 LCE3BQ5TA77 95 aa4.23□□□□□ -1.73
CHD9-207ENST00000562806 GIMAP6Q6P9H5 292 aa4.23□□□□□ -1.73
CHD9-207ENST00000562806 TRMT10BQ6PF06 316 aaKnown RBP4.23□□□□□ -1.73
CHD9-207ENST00000562806 SPOCD1Q6ZMY3 1216 aa4.23□□□□□ -1.73
CHD9-207ENST00000562806 REXO1L1PQ8IX06 675 aa4.23□□□□□ -1.73
CHD9-207ENST00000562806 TP53I13Q8NBR0 393 aaPredicted RBP4.23□□□□□ -1.73
CHD9-207ENST00000562806 OR2W6PQ8NHA6 318 aa4.23□□□□□ -1.73
CHD9-207ENST00000562806 BTBD2Q9BX70 525 aa4.23□□□□□ -1.73
CHD9-207ENST00000562806 INCENPQ9NQS7 918 aa4.23□□□□□ -1.73
CHD9-207ENST00000562806 CROTQ9UKG9 612 aa4.23□□□□□ -1.73
CHD9-207ENST00000562806 PRKAB1Q9Y478 270 aa4.23□□□□□ -1.73
CHD9-207ENST00000562806 MROH6A6NGR9 719 aa4.22□□□□□ -1.73
CHD9-207ENST00000562806 H0Y858 1186 aa4.22□□□□□ -1.73
CHD9-207ENST00000562806 TRAF5O00463 557 aa4.22□□□□□ -1.73
CHD9-207ENST00000562806 DDX3XO00571 662 aaKnown RBP eCLIP4.22□□□□□ -1.73
CHD9-207ENST00000562806 TRIM13O60858 407 aa4.22□□□□□ -1.73
CHD9-207ENST00000562806 MAFO75444 373 aaPredicted RBP4.22□□□□□ -1.73
CHD9-207ENST00000562806 F2P00734 622 aa4.22□□□□□ -1.73
CHD9-207ENST00000562806 ZBTB48P10074 688 aaPredicted RBP4.22□□□□□ -1.73
CHD9-207ENST00000562806 CPEP16870 476 aa4.22□□□□□ -1.73
CHD9-207ENST00000562806 SOX5P35711 763 aa4.22□□□□□ -1.73
CHD9-207ENST00000562806 GYS2P54840 703 aa4.22□□□□□ -1.73
CHD9-207ENST00000562806 MAP3K12Q12852 859 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms