RNA–Protein interactions for RNA: ENST00000562642.1

AC135048.1-202, humanhuman

TSL 3

Gene AC135048.1, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC135048.1-202ENST00000562642 TMEM39AQ9NV64 488 aa8.91□□□□□ -0.98
AC135048.1-202ENST00000562642 MTMR10Q9NXD2 777 aa8.91□□□□□ -0.98
AC135048.1-202ENST00000562642 BARHL2Q9NY43 387 aa8.91□□□□□ -0.98
AC135048.1-202ENST00000562642 RTEL1Q9NZ71 1219 aa8.91□□□□□ -0.98
AC135048.1-202ENST00000562642 DNAH12Q6ZR08 3092 aa8.91□□□□□ -0.98
AC135048.1-202ENST00000562642 FRMPD4Q14CM0 1322 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 SMCO2A6NFE2 343 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 STXBP3O00186 592 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 KPNA6O60684 536 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 STAM2O75886 525 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 GGPS1O95749 300 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 MMP3P08254 477 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 RAG1P15918 1043 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 UBA1P22314 1058 aaKnown RBP8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 VARSP26640 1264 aaKnown RBP8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 NKX3-2P78367 333 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 PURAQ00577 322 aaKnown RBP8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 ARHGAP1Q07960 439 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 ITGA7Q13683 1181 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 ANKRD1Q15327 319 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 PFKFB3Q16875 520 aaPredicted RBP8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 PCNX4Q63HM2 1172 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 NLRX1Q86UT6 975 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 CCDC148Q8NFR7 591 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 PGBD1Q96JS3 809 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 ZFP42Q96MM3 310 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 SPATA33Q96N06 139 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 RNF26Q9BY78 433 aaPredicted RBP8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 GLT8D2Q9H1C3 349 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 SLKQ9H2G2 1235 aaPredicted RBP8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 MLXIPQ9HAP2 919 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 RIC8AQ9NPQ8 531 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 DDX41Q9UJV9 622 aaKnown RBP8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 PCDHA6Q9UN73 950 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 PCDHA8Q9Y5H6 950 aa8.9□□□□□ -0.98
AC135048.1-202ENST00000562642 LAMA3Q16787 3333 aa8.9□□□□□ -0.99
AC135048.1-202ENST00000562642 MYO9BQ13459 2157 aa8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 COL6A3P12111 3177 aa8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 A6NJR5 290 aa8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 TULP1O00294 542 aaPredicted RBP8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 NOP56O00567 594 aaKnown RBP8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 PRPF3O43395 683 aaKnown RBP8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 FIBPO43427 364 aa8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 CDKL5O76039 1030 aa8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 IFNAR1P17181 557 aa8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 AK2P54819 239 aa8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 EVCP57679 992 aa8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 MRPS9P82933 396 aaKnown RBP8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 SP4Q02446 784 aa8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 SSRP1Q08945 709 aaKnown RBP8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 KCNH2Q12809 1159 aa8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 AP3B2Q13367 1082 aa8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 LAMC2Q13753 1193 aa8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 DGKDQ16760 1214 aa8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 C8orf34Q49A92 452 aa8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 JAKMIP3Q5VZ66 844 aa8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 DESI1Q6ICB0 168 aa8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 XRRA1Q6P2D8 792 aa8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 ANKRD33Q7Z3H0 272 aa8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 SH3RF1Q7Z6J0 888 aa8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 ZNF274Q96GC6 653 aaPredicted RBP8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 TOX2Q96NM4 488 aa8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 ANO3Q9BYT9 981 aa8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 C6orf50Q9HD87 102 aa8.89□□□□□ -0.99
AC135048.1-202ENST00000562642 KIAA1217Q5T5P2 1943 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 TRIM43BA6NCK2 446 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 DLL1O00548 723 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 DEXIO95424 95 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 FOSP01100 380 aaPredicted RBP8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 ZNF286BP0CG31 522 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 TGFB3P10600 412 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 GNA11P29992 359 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 ZNF76P36508 570 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 CDK7P50613 346 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 NEK4P51957 841 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 FAAP100Q0VG06 881 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 MTMR1Q13613 665 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 NEDD9Q14511 834 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 NTRK3Q16288 839 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 PKN1Q16512 942 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 NBPF20Q3BBV1 942 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 CELF3Q5SZQ8 465 aaKnown RBP8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 CYFIP1Q7L576 1253 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 FAM126BQ8IXS8 530 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 REXO1Q8N1G1 1221 aaKnown RBP8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 PPTC7Q8NI37 304 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 BICD2Q8TD16 824 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 PPP1R13LQ8WUF5 828 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 SPIRE2Q8WWL2 714 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 BADQ92934 168 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 TRIM43Q96BQ3 446 aaPredicted RBP8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 CDHR1Q96JP9 859 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 INPP4AQ96PE3 977 aaPredicted RBP8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 KATNAL1Q9BW62 490 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 SEZ6LQ9BYH1 1024 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 PPP1R12CQ9BZL4 782 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 UPF2Q9HAU5 1272 aaKnown RBP8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 TMEM260Q9NX78 707 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 VPS54Q9P1Q0 977 aa8.88□□□□□ -0.99
AC135048.1-202ENST00000562642 TPCN1Q9ULQ1 816 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms