RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.75□□□□□ -1.33
CDH13-206ENST00000562601 ACAD9Q9H845 621 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 JMJD4Q9H9V9 463 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 LY9Q9HBG7 655 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 KLK14Q9P0G3 267 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 SNX14Q9Y5W7 946 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 FRMPD3Q5JV73 1810 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 DNAH12Q6ZR08 3092 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 RPTORQ8N122 1335 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 PTPDC1A2A3K4 754 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 CCDC69A6NI79 296 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 KLRF2D3W0D1 207 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 NFIBO00712 420 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 SH2B2O14492 632 aaPredicted RBP6.74□□□□□ -1.33
CDH13-206ENST00000562601 C2CD2LO14523 706 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 OIP5O43482 229 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 SGPL1O95470 568 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 GJB1P08034 283 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 HOXC6P09630 235 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 BRD2P25440 801 aaKnown RBP6.74□□□□□ -1.33
CDH13-206ENST00000562601 COPB2P35606 906 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 GJA8P48165 433 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 GSK3AP49840 483 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 NT5C2P49902 561 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 OAZ1P54368 228 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 BAATQ14032 418 aaPredicted RBP6.74□□□□□ -1.33
CDH13-206ENST00000562601 GRM4Q14833 912 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 CDC37Q16543 378 aaPredicted RBP6.74□□□□□ -1.33
CDH13-206ENST00000562601 SLC35G1Q2M3R5 365 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 QRICH1Q2TAL8 776 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 ASPRV1Q53RT3 343 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 GPATCH4Q5T3I0 446 aaKnown RBP6.74□□□□□ -1.33
CDH13-206ENST00000562601 MAP3K21Q5TCX8 1036 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 ZNF468Q5VIY5 522 aaPredicted RBP6.74□□□□□ -1.33
CDH13-206ENST00000562601 CATIPQ7Z7H3 387 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 ZNF654Q8IZM8 581 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 ABRAQ8N0Z2 381 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 CMTR1Q8N1G2 835 aaKnown RBP6.74□□□□□ -1.33
CDH13-206ENST00000562601 WHAMMQ8TF30 809 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 DIS3LQ8TF46 1054 aaKnown RBP6.74□□□□□ -1.33
CDH13-206ENST00000562601 TBC1D5Q92609 795 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 JAKMIP1Q96N16 626 aaKnown RBP6.74□□□□□ -1.33
CDH13-206ENST00000562601 USP26Q9BXU7 913 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 A1CFQ9NQ94 594 aaKnown RBP6.74□□□□□ -1.33
CDH13-206ENST00000562601 PAK6Q9NQU5 681 aaPredicted RBP6.74□□□□□ -1.33
CDH13-206ENST00000562601 SLC5A4Q9NY91 659 aa6.74□□□□□ -1.33
CDH13-206ENST00000562601 NAP1L2Q9ULW6 460 aaPredicted RBP6.74□□□□□ -1.33
CDH13-206ENST00000562601 DNAJC25-GNG10A0A024R161 153 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 hCG_1642624A0A1W2PR95 340 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 RNF225M0QZC1 329 aaPredicted RBP6.73□□□□□ -1.33
CDH13-206ENST00000562601 PPP1R11O60927 126 aaPredicted RBP6.73□□□□□ -1.33
CDH13-206ENST00000562601 REC8O95072 547 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 IGHA2P01877 340 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 CYBAP13498 195 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 CALML3P27482 149 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 HSPA4P34932 840 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 IDH3AP50213 366 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 ARSDP51689 593 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 EXOSC10Q01780 885 aaKnown RBP6.73□□□□□ -1.33
CDH13-206ENST00000562601 SPEM2Q0P670 501 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 TROAPQ12815 778 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 SFSWAPQ12872 951 aaKnown RBP6.73□□□□□ -1.33
CDH13-206ENST00000562601 TKFCQ3LXA3 575 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 COX20Q5RI15 118 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 OLFML2BQ68BL8 750 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 DHX32Q7L7V1 743 aaKnown RBP6.73□□□□□ -1.33
CDH13-206ENST00000562601 HOMER1Q86YM7 354 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 CLEC4DQ8WXI8 215 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 KCNB2Q92953 911 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 LENG1Q96BZ8 264 aaPredicted RBP6.73□□□□□ -1.33
CDH13-206ENST00000562601 IFT43Q96FT9 208 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 FGD4Q96M96 766 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 PIGSQ96S52 555 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 TINF2Q9BSI4 451 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 C11orf16Q9NQ32 467 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 CYP39A1Q9NYL5 469 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 FBXO40Q9UH90 709 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 BRPF3Q9ULD4 1205 aa6.73□□□□□ -1.33
CDH13-206ENST00000562601 CYTH3O43739 400 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 MICAL2O94851 1124 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 FARP2O94887 1054 aaPredicted RBP6.72□□□□□ -1.33
CDH13-206ENST00000562601 ARHGEF15O94989 841 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 PLEKHA8P1O95397 391 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 SNAI1O95863 264 aaPredicted RBP6.72□□□□□ -1.33
CDH13-206ENST00000562601 CASTP20810 708 aaKnown RBP6.72□□□□□ -1.33
CDH13-206ENST00000562601 PTGS1P23219 599 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 MARSP56192 900 aaKnown RBP6.72□□□□□ -1.33
CDH13-206ENST00000562601 FGD1P98174 961 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 APOBRQ0VD83 1088 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 KRT32Q14532 448 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 SLC30A10Q6XR72 485 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 RNF207Q6ZRF8 634 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 Q6ZUG5 572 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 ARMCX2Q7L311 632 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 EEPD1Q7L9B9 569 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 MICU3Q86XE3 530 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 FBXO11Q86XK2 927 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 SRBD1Q8N5C6 995 aaKnown RBP6.72□□□□□ -1.33
CDH13-206ENST00000562601 FAM133AQ8N9E0 248 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 GALNT6Q8NCL4 622 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms