RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 SMIM10L2AP0DMW4 78 aa18.55■□□□□ 0.56
PKD1-226ENST00000562425 SMIM10L2BP0DMW5 78 aa18.55■□□□□ 0.56
PKD1-226ENST00000562425 SHHQ15465 462 aa18.55■□□□□ 0.56
PKD1-226ENST00000562425 ABHD15Q6UXT9 468 aa18.55■□□□□ 0.56
PKD1-226ENST00000562425 FAM20AQ96MK3 541 aa18.55■□□□□ 0.56
PKD1-226ENST00000562425 UIMC1Q96RL1 719 aa18.55■□□□□ 0.56
PKD1-226ENST00000562425 COL25A1Q9BXS0 654 aaPredicted RBP18.55■□□□□ 0.56
PKD1-226ENST00000562425 FOXP1Q9H334 677 aaPredicted RBP18.55■□□□□ 0.56
PKD1-226ENST00000562425 PCDHA10Q9Y5I2 948 aa18.55■□□□□ 0.56
PKD1-226ENST00000562425 NRCAMQ92823 1304 aa18.54■□□□□ 0.56
PKD1-226ENST00000562425 TMEM265A0A087WTH1 108 aa18.54■□□□□ 0.56
PKD1-226ENST00000562425 PITPNM1O00562 1244 aa18.54■□□□□ 0.56
PKD1-226ENST00000562425 PSAPP07602 524 aa18.54■□□□□ 0.56
PKD1-226ENST00000562425 CYP2C18P33260 490 aa18.54■□□□□ 0.56
PKD1-226ENST00000562425 PTK7Q13308 1070 aa18.54■□□□□ 0.56
PKD1-226ENST00000562425 PPIGQ13427 754 aaKnown RBP eCLIP18.54■□□□□ 0.561e-7■■■□□ 15.4
PKD1-226ENST00000562425 CAGE1Q8TC20 777 aa18.54■□□□□ 0.56
PKD1-226ENST00000562425 ATP6V0A1Q93050 837 aa18.54■□□□□ 0.56
PKD1-226ENST00000562425 RNPEPQ9H4A4 650 aa18.54■□□□□ 0.56
PKD1-226ENST00000562425 SAMM50Q9Y512 469 aa18.54■□□□□ 0.56
PKD1-226ENST00000562425 IGKV6D-21A0A0A0MT36 114 aa18.53■□□□□ 0.56
PKD1-226ENST00000562425 WDR64B1ANS9 1081 aa18.53■□□□□ 0.56
PKD1-226ENST00000562425 TBX3O15119 743 aa18.53■□□□□ 0.56
PKD1-226ENST00000562425 BAG4O95429 457 aaKnown RBP18.53■□□□□ 0.56
PKD1-226ENST00000562425 GJB2P29033 226 aa18.53■□□□□ 0.56
PKD1-226ENST00000562425 SFNP31947 248 aa18.53■□□□□ 0.56
PKD1-226ENST00000562425 JAK3P52333 1124 aa18.53■□□□□ 0.56
PKD1-226ENST00000562425 EARS2Q5JPH6 523 aaKnown RBP18.53■□□□□ 0.56
PKD1-226ENST00000562425 RDM1Q8NG50 284 aa18.53■□□□□ 0.56
PKD1-226ENST00000562425 AFAP1L1Q8TED9 768 aa18.53■□□□□ 0.56
PKD1-226ENST00000562425 FAM161BQ96MY7 647 aa18.53■□□□□ 0.56
PKD1-226ENST00000562425 PCYT2Q99447 389 aa18.53■□□□□ 0.56
PKD1-226ENST00000562425 DOCK5Q9H7D0 1870 aa18.53■□□□□ 0.56
PKD1-226ENST00000562425 ZNF302Q9NR11 478 aa18.53■□□□□ 0.56
PKD1-226ENST00000562425 SETD4Q9NVD3 440 aa18.53■□□□□ 0.56
PKD1-226ENST00000562425 TTC28Q96AY4 2481 aa18.52■□□□□ 0.56
PKD1-226ENST00000562425 RRN3P2A6NIE6 340 aa18.52■□□□□ 0.56
PKD1-226ENST00000562425 PSMD10O75832 226 aa18.52■□□□□ 0.56
PKD1-226ENST00000562425 MARK3P27448 753 aa18.52■□□□□ 0.56
PKD1-226ENST00000562425 HOXC8P31273 242 aa18.52■□□□□ 0.56
PKD1-226ENST00000562425 PPFIA1Q13136 1202 aa18.52■□□□□ 0.56
PKD1-226ENST00000562425 C9orf50Q5SZB4 431 aa18.52■□□□□ 0.56
PKD1-226ENST00000562425 SWSAP1Q6NVH7 229 aa18.52■□□□□ 0.56
PKD1-226ENST00000562425 PDXDC2PQ6P474 469 aa18.52■□□□□ 0.56
PKD1-226ENST00000562425 RPUSD2Q8IZ73 545 aaKnown RBP18.52■□□□□ 0.56
PKD1-226ENST00000562425 ETNPPLQ8TBG4 499 aa18.52■□□□□ 0.56
PKD1-226ENST00000562425 CDX2Q99626 313 aaPredicted RBP18.52■□□□□ 0.56
PKD1-226ENST00000562425 SEMA6BQ9H3T3 888 aa18.52■□□□□ 0.56
PKD1-226ENST00000562425 DISC1Q9NRI5 854 aa18.52■□□□□ 0.56
PKD1-226ENST00000562425 TRPC6Q9Y210 931 aa18.52■□□□□ 0.56
PKD1-226ENST00000562425 VCANP13611 3396 aa18.51■□□□□ 0.55
PKD1-226ENST00000562425 FAM205CA6NFA0 338 aa18.51■□□□□ 0.55
PKD1-226ENST00000562425 H3BQV1 296 aa18.51■□□□□ 0.55
PKD1-226ENST00000562425 SLC37A4O43826 429 aa18.51■□□□□ 0.55
PKD1-226ENST00000562425 PARNO95453 639 aaKnown RBP18.51■□□□□ 0.55
PKD1-226ENST00000562425 CSF2RAP15509 400 aa18.51■□□□□ 0.55
PKD1-226ENST00000562425 RFC2P35250 354 aa18.51■□□□□ 0.55
PKD1-226ENST00000562425 CCL23P55773 120 aa18.51■□□□□ 0.55
PKD1-226ENST00000562425 CUL4AQ13619 759 aa18.51■□□□□ 0.55
PKD1-226ENST00000562425 SERINC5Q86VE9 423 aa18.51■□□□□ 0.55
PKD1-226ENST00000562425 NOSTRINQ8IVI9 506 aa18.51■□□□□ 0.55
PKD1-226ENST00000562425 SLFN12Q8IYM2 578 aa18.51■□□□□ 0.55
PKD1-226ENST00000562425 KCNMB3Q9NPA1 279 aa18.51■□□□□ 0.55
PKD1-226ENST00000562425 NOL7Q9UMY1 257 aaKnown RBP18.51■□□□□ 0.55
PKD1-226ENST00000562425 UMODL1Q5DID0 1318 aa18.5■□□□□ 0.55
PKD1-226ENST00000562425 POTEB3A0JP26 581 aa18.5■□□□□ 0.55
PKD1-226ENST00000562425 CHMP2AO43633 222 aa18.5■□□□□ 0.55
PKD1-226ENST00000562425 HBP1O60381 514 aa18.5■□□□□ 0.55
PKD1-226ENST00000562425 ZNF200P98182 395 aaPredicted RBP18.5■□□□□ 0.55
PKD1-226ENST00000562425 RBL2Q08999 1139 aa18.5■□□□□ 0.55
PKD1-226ENST00000562425 ORC2Q13416 577 aaPredicted RBP18.5■□□□□ 0.55
PKD1-226ENST00000562425 PLCB4Q15147 1175 aa18.5■□□□□ 0.55
PKD1-226ENST00000562425 GRIK4Q16099 956 aa18.5■□□□□ 0.55
PKD1-226ENST00000562425 POTEBQ6S5H4 581 aa18.5■□□□□ 0.55
PKD1-226ENST00000562425 MIER3Q7Z3K6 550 aa18.5■□□□□ 0.55
PKD1-226ENST00000562425 CCDC60Q8IWA6 550 aaPredicted RBP18.5■□□□□ 0.55
PKD1-226ENST00000562425 CKAP2LQ8IYA6 745 aa18.5■□□□□ 0.55
PKD1-226ENST00000562425 MAFAQ8NHW3 353 aaPredicted RBP18.5■□□□□ 0.55
PKD1-226ENST00000562425 LMBR1Q8WVP7 490 aa18.5■□□□□ 0.55
PKD1-226ENST00000562425 CTAGE1Q96RT6 745 aa18.5■□□□□ 0.55
PKD1-226ENST00000562425 WNT8AQ9H1J5 351 aa18.5■□□□□ 0.55
PKD1-226ENST00000562425 UNC45AQ9H3U1 944 aa18.5■□□□□ 0.55
PKD1-226ENST00000562425 IL23AQ9NPF7 189 aa18.5■□□□□ 0.55
PKD1-226ENST00000562425 MAFBQ9Y5Q3 323 aaPredicted RBP18.5■□□□□ 0.55
PKD1-226ENST00000562425 K7ELQ4 463 aaPredicted RBP18.49■□□□□ 0.55
PKD1-226ENST00000562425 TREHO43280 583 aa18.49■□□□□ 0.55
PKD1-226ENST00000562425 RPLP2P05387 115 aaKnown RBP18.49■□□□□ 0.55
PKD1-226ENST00000562425 PFKMP08237 780 aa18.49■□□□□ 0.55
PKD1-226ENST00000562425 INSRRP14616 1297 aa18.49■□□□□ 0.55
PKD1-226ENST00000562425 SELPP16109 830 aa18.49■□□□□ 0.55
PKD1-226ENST00000562425 U2AF2P26368 475 aaKnown RBP eCLIP18.49■□□□□ 0.55
PKD1-226ENST00000562425 TRAPPC10P48553 1259 aa18.49■□□□□ 0.55
PKD1-226ENST00000562425 HIC1Q14526 733 aa18.49■□□□□ 0.55
PKD1-226ENST00000562425 LARP1BQ659C4 914 aaKnown RBP18.49■□□□□ 0.55
PKD1-226ENST00000562425 TAF2Q6P1X5 1199 aa18.49■□□□□ 0.55
PKD1-226ENST00000562425 PSRC1Q6PGN9 363 aaPredicted RBP18.49■□□□□ 0.55
PKD1-226ENST00000562425 ATP8B4Q8TF62 1192 aa18.49■□□□□ 0.55
PKD1-226ENST00000562425 SNX21Q969T3 373 aa18.49■□□□□ 0.55
PKD1-226ENST00000562425 GABBR1Q9UBS5 961 aa18.49■□□□□ 0.55
PKD1-226ENST00000562425 CDH23Q9H251 3354 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms