RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 SRP68Q9UHB9 627 aaKnown RBP12.11□□□□□ -0.47
RPAP1-204ENST00000562303 PNMA6FA0A0J9YX94 578 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 A0A1W2PQ27 194 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 A0A1W2PQ64 194 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 A0A1W2PQD8 194 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 ALCAMQ13740 583 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 BBS9Q3SYG4 887 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 BZW1Q7L1Q6 419 aaKnown RBP12.11□□□□□ -0.47
RPAP1-204ENST00000562303 SNX19Q92543 992 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 MID2Q9UJV3 735 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 INSRP06213 1382 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 CARMIL3Q8ND23 1372 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 MAP3K7O43318 606 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 ART3Q13508 389 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 ZSCAN26Q16670 478 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 ZNF667Q5HYK9 610 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 SRRM1Q8IYB3 904 aaKnown RBP12.11□□□□□ -0.47
RPAP1-204ENST00000562303 PDCD6IPQ8WUM4 868 aaKnown RBP12.11□□□□□ -0.47
RPAP1-204ENST00000562303 MASTLQ96GX5 879 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 MRFAP1L1Q96HT8 127 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 GPR101Q96P66 508 aaPredicted RBP12.11□□□□□ -0.47
RPAP1-204ENST00000562303 PSMA2P25787 234 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 PEX3P56589 373 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 TSPY1Q01534 308 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 SMAP1Q8IYB5 467 aaPredicted RBP12.11□□□□□ -0.47
RPAP1-204ENST00000562303 PDCD7Q8N8D1 485 aaKnown RBP12.11□□□□□ -0.47
RPAP1-204ENST00000562303 CCDC197Q8NCU1 140 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 URGCPQ8TCY9 931 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 VPS39Q96JC1 886 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 COA1Q9GZY4 146 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 DRC3Q9H069 523 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 TBK1Q9UHD2 729 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 FTCDO95954 541 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 MMP10P09238 476 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 PAMP19021 973 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 NCF2P19878 526 aaPredicted RBP12.1□□□□□ -0.47
RPAP1-204ENST00000562303 LTKP29376 864 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 IFNA8P32881 189 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 ARHGDIAP52565 204 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 TWF2Q6IBS0 349 aaKnown RBP12.1□□□□□ -0.47
RPAP1-204ENST00000562303 NGRNQ9NPE2 291 aaKnown RBP12.1□□□□□ -0.47
RPAP1-204ENST00000562303 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.1□□□□□ -0.478e-8■■■■■ 36.8
RPAP1-204ENST00000562303 SUGT1Q9Y2Z0 365 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 NPC1L1Q9UHC9 1359 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 CDK8P49336 464 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 OCRLQ01968 901 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 MECOMQ03112 1051 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 SLMAPQ14BN4 828 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 C10orf76Q5T2E6 689 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 ANTXR1Q9H6X2 564 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 HPCAL4Q9UM19 191 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 NNMTP40261 264 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 SEPT2Q15019 361 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 HABP4Q5JVS0 413 aaKnown RBP12.1□□□□□ -0.47
RPAP1-204ENST00000562303 ACBD5Q5T8D3 534 aaPredicted RBP12.1□□□□□ -0.47
RPAP1-204ENST00000562303 SEPT12Q8IYM1 358 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 GRAMD1CQ8IYS0 662 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 SUFUQ9UMX1 484 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 ZMYM4Q5VZL5 1548 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 CFLARO15519 480 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 LDHAP00338 332 aaKnown RBP12.1□□□□□ -0.47
RPAP1-204ENST00000562303 ASNSP08243 561 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 JAK3P52333 1124 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 SH3BGRP55822 239 aaPredicted RBP12.1□□□□□ -0.47
RPAP1-204ENST00000562303 ATG16L1Q676U5 607 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 MAP4K1Q92918 833 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 LSG1Q9H089 658 aaKnown RBP12.1□□□□□ -0.47
RPAP1-204ENST00000562303 TOPORSQ9NS56 1045 aaPredicted RBP12.1□□□□□ -0.47
RPAP1-204ENST00000562303 DONSONQ9NYP3 566 aa12.1□□□□□ -0.47
RPAP1-204ENST00000562303 CYP2D7A0A087X1C5 515 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 MOCS3O95396 460 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 MMP1P03956 469 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 TAC1P20366 129 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 KCNA4P22459 653 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 CDC25AP30304 524 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 PSMD2Q13200 908 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 STXBP2Q15833 593 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 KIAA1755Q5JYT7 1200 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 GIPC2Q8TF65 315 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 IFT43Q96FT9 208 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 ZBTB18Q99592 522 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 MED4Q9NPJ6 270 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 DRP2Q13474 957 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 RMDN2Q96LZ7 410 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 EDEM3Q9BZQ6 932 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 GINM1Q9NU53 330 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 MAST1Q9Y2H9 1570 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 MYOM2P54296 1465 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 GH2P01242 217 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 PAPOLAP51003 745 aaKnown RBP12.09□□□□□ -0.47
RPAP1-204ENST00000562303 TNFAIP2Q03169 654 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 NKX1-1Q15270 411 aaPredicted RBP12.09□□□□□ -0.47
RPAP1-204ENST00000562303 PPP6R3Q5H9R7 873 aaPredicted RBP12.09□□□□□ -0.47
RPAP1-204ENST00000562303 RASIP1Q5U651 963 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 TMEM179Q6ZVK1 233 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 LCA5Q86VQ0 697 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 NLRP10Q86W26 655 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 HOXC10Q9NYD6 342 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 MYL1P05976 194 aa12.09□□□□□ -0.47
RPAP1-204ENST00000562303 PLS3P13797 630 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms