RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 FLOT1O75955 427 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 RHOBTB3O94955 611 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 CELF2O95319 508 aaKnown RBP7.32□□□□□ -1.24
CAPN3-210ENST00000561817 CFBP00751 764 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 SPATA31C1P0DKV0 1188 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 ATP1A3P13637 1013 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 STAT3P40763 770 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 OAZ1P54368 228 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 EHHADHQ08426 723 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 TMEM266Q2M3C6 531 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 COBLL1Q53SF7 1204 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 PRR16Q569H4 304 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 ZNF658Q5TYW1 1059 aaPredicted RBP7.32□□□□□ -1.24
CAPN3-210ENST00000561817 CDKAL1Q5VV42 579 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 FCHSD1Q86WN1 690 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 SLFN12Q8IYM2 578 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 SMYD4Q8IYR2 804 aaPredicted RBP7.32□□□□□ -1.24
CAPN3-210ENST00000561817 IL31RAQ8NI17 732 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 PBXIP1Q96AQ6 731 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 CDCA5Q96FF9 252 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 CCDC34Q96HJ3 373 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 PKNOX2Q96KN3 472 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 TANGO6Q9C0B7 1094 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 KCNF1Q9H3M0 494 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 INTS13Q9NVM9 706 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 FANCLQ9NW38 375 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 MAP3K20Q9NYL2 800 aaKnown RBP7.32□□□□□ -1.24
CAPN3-210ENST00000561817 PNMA2Q9UL42 364 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 PCDHA12Q9UN75 941 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 RIPK3Q9Y572 518 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 LCTP09848 1927 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 A0A0G2JLL6 359 aaPredicted RBP7.31□□□□□ -1.24
CAPN3-210ENST00000561817 SPDYE5A6NIY4 337 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 ESPNB1AK53 854 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 EML1O00423 815 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 ZBED4O75132 1171 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 MED24O75448 989 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 BCRP11274 1271 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 ITGB5P18084 799 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 HOXA7P31268 230 aaPredicted RBP7.31□□□□□ -1.24
CAPN3-210ENST00000561817 NF2P35240 595 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 MRPS9P82933 396 aaKnown RBP7.31□□□□□ -1.24
CAPN3-210ENST00000561817 FANCCQ00597 558 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 SETQ01105 290 aaPredicted RBP7.31□□□□□ -1.24
CAPN3-210ENST00000561817 FSTL1Q12841 308 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 PPP2R5CQ13362 524 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 COG2Q14746 738 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 TMEM132BQ14DG7 1078 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 ZRSR1Q15695 479 aaKnown RBP7.31□□□□□ -1.24
CAPN3-210ENST00000561817 CCDC144BQ3MJ40 725 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 CEP55Q53EZ4 464 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 TREML2Q5T2D2 321 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 LDLRAD1Q5T700 205 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 SPATA1Q5VX52 437 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 KRT79Q5XKE5 535 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 SLC30A10Q6XR72 485 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 MOB2Q70IA6 237 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 OTOP1Q7RTM1 612 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 NIPA1Q7RTP0 329 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 PRRT2Q7Z6L0 340 aaPredicted RBP7.31□□□□□ -1.24
CAPN3-210ENST00000561817 ZSCAN30Q86W11 494 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 MCF2L2Q86YR7 1114 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 TRMT44Q8IYL2 757 aaKnown RBP7.31□□□□□ -1.24
CAPN3-210ENST00000561817 ADSSL1Q8N142 457 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 FAM43AQ8N2R8 423 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 GIMAP8Q8ND71 665 aaPredicted RBP7.31□□□□□ -1.24
CAPN3-210ENST00000561817 SNIP1Q8TAD8 396 aaKnown RBP7.31□□□□□ -1.24
CAPN3-210ENST00000561817 SNX29Q8TEQ0 813 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 UBXN4Q92575 508 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 LARP4BQ92615 738 aaKnown RBP7.31□□□□□ -1.24
CAPN3-210ENST00000561817 HLA-CQ95604 372 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 DNAJC19Q96DA6 116 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 CALML4Q96GE6 196 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 CLMNQ96JQ2 1002 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 UIMC1Q96RL1 719 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 MXRA8Q9BRK3 442 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 POLR3CQ9BUI4 534 aaPredicted RBP7.31□□□□□ -1.24
CAPN3-210ENST00000561817 RAB34Q9BZG1 259 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 TRIM5Q9C035 493 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 XPO4Q9C0E2 1151 aaKnown RBP7.31□□□□□ -1.24
CAPN3-210ENST00000561817 MAF1Q9H063 256 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 RMND1Q9NWS8 449 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 NRBP1Q9UHY1 535 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 DACH1Q9UI36 760 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 KCNH4Q9UQ05 1017 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 ZKSCAN5Q9Y2L8 839 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 GDAQ9Y2T3 454 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 UBIAD1Q9Y5Z9 338 aa7.31□□□□□ -1.24
CAPN3-210ENST00000561817 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.31□□□□□ -1.24
CAPN3-210ENST00000561817 PVALEFA0A1B0GWK0 134 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 FRMD3A2A2Y4 597 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 CXCL11O14625 94 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 DHX15O43143 795 aaKnown RBP7.3□□□□□ -1.24
CAPN3-210ENST00000561817 PPP1R12BO60237 982 aaPredicted RBP7.3□□□□□ -1.24
CAPN3-210ENST00000561817 ARP10275 920 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 ALAS1P13196 640 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 RPA1P27694 616 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 GJA5P36382 358 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 PRCPP42785 496 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 IREB2P48200 963 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms