RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 SHANK2Q9UPX8 1470 aa5.42□□□□□ -1.54
LRRC28-222ENST00000561431 DHX29Q7Z478 1369 aaKnown RBP5.42□□□□□ -1.54
LRRC28-222ENST00000561431 EIF2AK4Q9P2K8 1649 aaKnown RBP5.41□□□□□ -1.54
LRRC28-222ENST00000561431 CNTLNQ9NXG0 1405 aa5.41□□□□□ -1.54
LRRC28-222ENST00000561431 NRDCO43847 1150 aa5.41□□□□□ -1.54
LRRC28-222ENST00000561431 PSPNO60542 156 aa5.41□□□□□ -1.54
LRRC28-222ENST00000561431 GNAT1P11488 350 aa5.41□□□□□ -1.54
LRRC28-222ENST00000561431 SYN1P17600 705 aa5.41□□□□□ -1.54
LRRC28-222ENST00000561431 FPR2P25090 351 aa5.41□□□□□ -1.54
LRRC28-222ENST00000561431 CORO7P57737 925 aa5.41□□□□□ -1.54
LRRC28-222ENST00000561431 IGBP1P78318 339 aa5.41□□□□□ -1.54
LRRC28-222ENST00000561431 SPIRE1Q08AE8 756 aa5.41□□□□□ -1.54
LRRC28-222ENST00000561431 CRY1Q16526 586 aa5.41□□□□□ -1.54
LRRC28-222ENST00000561431 PIK3R6Q5UE93 754 aa5.41□□□□□ -1.54
LRRC28-222ENST00000561431 DDX46Q7L014 1031 aaKnown RBP5.41□□□□□ -1.54
LRRC28-222ENST00000561431 LILRA2Q8N149 483 aa5.41□□□□□ -1.54
LRRC28-222ENST00000561431 IGSF22Q8N9C0 903 aa5.41□□□□□ -1.54
LRRC28-222ENST00000561431 DPF3Q92784 378 aa5.41□□□□□ -1.54
LRRC28-222ENST00000561431 KCNC2Q96PR1 638 aa5.41□□□□□ -1.54
LRRC28-222ENST00000561431 TARS2Q9BW92 718 aaKnown RBP5.41□□□□□ -1.54
LRRC28-222ENST00000561431 CAAP1Q9H8G2 361 aa5.41□□□□□ -1.54
LRRC28-222ENST00000561431 CABP5Q9NP86 173 aa5.41□□□□□ -1.54
LRRC28-222ENST00000561431 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.41□□□□□ -1.54
LRRC28-222ENST00000561431 COQ6Q9Y2Z9 468 aa5.41□□□□□ -1.54
LRRC28-222ENST00000561431 COL4A3BPQ9Y5P4 624 aa5.41□□□□□ -1.54
LRRC28-222ENST00000561431 FAM135AQ9P2D6 1515 aa5.41□□□□□ -1.54
LRRC28-222ENST00000561431 ZNF142P52746 1687 aaPredicted RBP5.4□□□□□ -1.54
LRRC28-222ENST00000561431 ABCC5O15440 1437 aa5.4□□□□□ -1.54
LRRC28-222ENST00000561431 DAPK1P53355 1430 aa5.4□□□□□ -1.54
LRRC28-222ENST00000561431 KDM5DQ9BY66 1539 aa5.4□□□□□ -1.54
LRRC28-222ENST00000561431 CCDC66A2RUB6 948 aa5.4□□□□□ -1.54
LRRC28-222ENST00000561431 H7BY64 318 aa5.4□□□□□ -1.54
LRRC28-222ENST00000561431 KRIT1O00522 736 aa5.4□□□□□ -1.54
LRRC28-222ENST00000561431 HPXP02790 462 aa5.4□□□□□ -1.54
LRRC28-222ENST00000561431 CPEP16870 476 aa5.4□□□□□ -1.54
LRRC28-222ENST00000561431 KRT15P19012 456 aa5.4□□□□□ -1.54
LRRC28-222ENST00000561431 CEBPAP49715 358 aaPredicted RBP5.4□□□□□ -1.54
LRRC28-222ENST00000561431 GALK1P51570 392 aa5.4□□□□□ -1.54
LRRC28-222ENST00000561431 KIR3DS1Q14943 382 aa5.4□□□□□ -1.54
LRRC28-222ENST00000561431 SNX17Q15036 470 aa5.4□□□□□ -1.54
LRRC28-222ENST00000561431 CDCA2Q69YH5 1023 aaPredicted RBP5.4□□□□□ -1.54
LRRC28-222ENST00000561431 WWC2Q6AWC2 1192 aa5.4□□□□□ -1.54
LRRC28-222ENST00000561431 ZCCHC8Q6NZY4 707 aaKnown RBP5.4□□□□□ -1.54
LRRC28-222ENST00000561431 PCDH19Q8TAB3 1148 aa5.4□□□□□ -1.54
LRRC28-222ENST00000561431 DDX1Q92499 740 aaKnown RBP5.4□□□□□ -1.54
LRRC28-222ENST00000561431 PLCD4Q9BRC7 762 aa5.4□□□□□ -1.54
LRRC28-222ENST00000561431 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.4□□□□□ -1.54
LRRC28-222ENST00000561431 PRDM16Q9HAZ2 1276 aa5.4□□□□□ -1.54
LRRC28-222ENST00000561431 PPARGC1AQ9UBK2 798 aaKnown RBP5.4□□□□□ -1.54
LRRC28-222ENST00000561431 FBXL7Q9UJT9 491 aa5.4□□□□□ -1.54
LRRC28-222ENST00000561431 MAPRE3Q9UPY8 281 aa5.4□□□□□ -1.54
LRRC28-222ENST00000561431 MYO3AQ8NEV4 1616 aa5.4□□□□□ -1.55
LRRC28-222ENST00000561431 NPATQ14207 1427 aa5.4□□□□□ -1.55
LRRC28-222ENST00000561431 PRDM15P57071 1507 aaPredicted RBP5.39□□□□□ -1.55
LRRC28-222ENST00000561431 DEPDC5O75140 1603 aa5.39□□□□□ -1.55
LRRC28-222ENST00000561431 M0R2C6 588 aa5.39□□□□□ -1.55
LRRC28-222ENST00000561431 ARVCFO00192 962 aa5.39□□□□□ -1.55
LRRC28-222ENST00000561431 NTRK1P04629 796 aa5.39□□□□□ -1.55
LRRC28-222ENST00000561431 PYGMP11217 842 aa5.39□□□□□ -1.55
LRRC28-222ENST00000561431 PDE6BP35913 854 aa5.39□□□□□ -1.55
LRRC28-222ENST00000561431 SCNN1BP51168 640 aa5.39□□□□□ -1.55
LRRC28-222ENST00000561431 NFKB2Q00653 900 aa5.39□□□□□ -1.55
LRRC28-222ENST00000561431 MVKQ03426 396 aa5.39□□□□□ -1.55
LRRC28-222ENST00000561431 NFIXQ14938 502 aa5.39□□□□□ -1.55
LRRC28-222ENST00000561431 NR0B2Q15466 257 aa5.39□□□□□ -1.55
LRRC28-222ENST00000561431 MROH9Q5TGP6 573 aa5.39□□□□□ -1.55
LRRC28-222ENST00000561431 GGNQ86UU5 652 aa5.39□□□□□ -1.55
LRRC28-222ENST00000561431 CISD2Q8N5K1 135 aaKnown RBP5.39□□□□□ -1.55
LRRC28-222ENST00000561431 NLGN2Q8NFZ4 835 aa5.39□□□□□ -1.55
LRRC28-222ENST00000561431 ATL2Q8NHH9 583 aa5.39□□□□□ -1.55
LRRC28-222ENST00000561431 PKNOX2Q96KN3 472 aa5.39□□□□□ -1.55
LRRC28-222ENST00000561431 AP5M1Q9H0R1 490 aa5.39□□□□□ -1.55
LRRC28-222ENST00000561431 EPB41L1Q9H4G0 881 aa5.39□□□□□ -1.55
LRRC28-222ENST00000561431 ACSL6Q9UKU0 697 aa5.39□□□□□ -1.55
LRRC28-222ENST00000561431 ZKSCAN5Q9Y2L8 839 aa5.39□□□□□ -1.55
LRRC28-222ENST00000561431 ZC3H13Q5T200 1668 aaKnown RBP5.39□□□□□ -1.55
LRRC28-222ENST00000561431 PTPRKQ15262 1439 aa5.39□□□□□ -1.55
LRRC28-222ENST00000561431 ADGRL2O95490 1459 aa5.39□□□□□ -1.55
LRRC28-222ENST00000561431 ABCC3O15438 1527 aa5.38□□□□□ -1.55
LRRC28-222ENST00000561431 DUOX2Q9NRD8 1548 aa5.38□□□□□ -1.55
LRRC28-222ENST00000561431 STRCQ7RTU9 1775 aa5.38□□□□□ -1.55
LRRC28-222ENST00000561431 A0A087X0B3 334 aa5.38□□□□□ -1.55
LRRC28-222ENST00000561431 MAFKO60675 156 aa5.38□□□□□ -1.55
LRRC28-222ENST00000561431 GAS7O60861 476 aa5.38□□□□□ -1.55
LRRC28-222ENST00000561431 PPP1R11O60927 126 aaPredicted RBP5.38□□□□□ -1.55
LRRC28-222ENST00000561431 NPTXRO95502 500 aa5.38□□□□□ -1.55
LRRC28-222ENST00000561431 MSL3P1P0C860 447 aa5.38□□□□□ -1.55
LRRC28-222ENST00000561431 COL6A2P12110 1019 aa5.38□□□□□ -1.55
LRRC28-222ENST00000561431 PNLIPP16233 465 aa5.38□□□□□ -1.55
LRRC28-222ENST00000561431 STAT3P40763 770 aa5.38□□□□□ -1.55
LRRC28-222ENST00000561431 STRN3Q13033 797 aa5.38□□□□□ -1.55
LRRC28-222ENST00000561431 CHRNA2Q15822 529 aa5.38□□□□□ -1.55
LRRC28-222ENST00000561431 TIGD5Q53EQ6 642 aa5.38□□□□□ -1.55
LRRC28-222ENST00000561431 ADGRF1Q5T601 910 aa5.38□□□□□ -1.55
LRRC28-222ENST00000561431 KRT26Q7Z3Y9 468 aa5.38□□□□□ -1.55
LRRC28-222ENST00000561431 NLRP10Q86W26 655 aa5.38□□□□□ -1.55
LRRC28-222ENST00000561431 THNSL2Q86YJ6 484 aa5.38□□□□□ -1.55
LRRC28-222ENST00000561431 C2orf69Q8N8R5 385 aa5.38□□□□□ -1.55
LRRC28-222ENST00000561431 PCDH12Q9NPG4 1184 aa5.38□□□□□ -1.55
LRRC28-222ENST00000561431 NUDT5Q9UKK9 219 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms