RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 VWA3AA6NCI4 1184 aa13.07□□□□□ -0.32
HERC1-214ENST00000561400 PPP6R2O75170 966 aa13.07□□□□□ -0.32
HERC1-214ENST00000561400 ARHGAP1Q07960 439 aa13.07□□□□□ -0.32
HERC1-214ENST00000561400 MTFR1Q15390 333 aa13.07□□□□□ -0.32
HERC1-214ENST00000561400 CELF3Q5SZQ8 465 aaKnown RBP13.07□□□□□ -0.32
HERC1-214ENST00000561400 DTHD1Q6ZMT9 781 aa13.07□□□□□ -0.32
HERC1-214ENST00000561400 EXOC8Q8IYI6 725 aa13.07□□□□□ -0.32
HERC1-214ENST00000561400 CLIC6Q96NY7 704 aa13.07□□□□□ -0.32
HERC1-214ENST00000561400 SDF4Q9BRK5 362 aa13.07□□□□□ -0.32
HERC1-214ENST00000561400 TEKT3Q9BXF9 490 aa13.07□□□□□ -0.32
HERC1-214ENST00000561400 UNC45AQ9H3U1 944 aa13.07□□□□□ -0.32
HERC1-214ENST00000561400 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.07□□□□□ -0.324e-7■■■■■ 130.9
HERC1-214ENST00000561400 SRPRBQ9Y5M8 271 aaKnown RBP13.07□□□□□ -0.32
HERC1-214ENST00000561400 POTEMA6NI47 508 aa13.06□□□□□ -0.32
HERC1-214ENST00000561400 PPP1R12AO14974 1030 aaPredicted RBP13.06□□□□□ -0.32
HERC1-214ENST00000561400 CCNE2O96020 404 aa13.06□□□□□ -0.32
HERC1-214ENST00000561400 MYCP01106 439 aaPredicted RBP13.06□□□□□ -0.32
HERC1-214ENST00000561400 FXR2P51116 673 aaKnown RBP eCLIP13.06□□□□□ -0.326e-7■■■■■ 33.1
HERC1-214ENST00000561400 SP4Q02446 784 aa13.06□□□□□ -0.32
HERC1-214ENST00000561400 HSDL1Q3SXM5 330 aa13.06□□□□□ -0.32
HERC1-214ENST00000561400 DNAJC21Q5F1R6 531 aaKnown RBP13.06□□□□□ -0.32
HERC1-214ENST00000561400 METTL7BQ6UX53 244 aa13.06□□□□□ -0.32
HERC1-214ENST00000561400 GIMAP8Q8ND71 665 aaPredicted RBP13.06□□□□□ -0.32
HERC1-214ENST00000561400 KCNG4Q8TDN1 519 aa13.06□□□□□ -0.32
HERC1-214ENST00000561400 TSPAN18Q96SJ8 248 aa13.06□□□□□ -0.32
HERC1-214ENST00000561400 MLXIPQ9HAP2 919 aa13.06□□□□□ -0.32
HERC1-214ENST00000561400 JPH1Q9HDC5 661 aaPredicted RBP13.06□□□□□ -0.32
HERC1-214ENST00000561400 HMX1Q9NP08 348 aaPredicted RBP13.06□□□□□ -0.32
HERC1-214ENST00000561400 SLC9A2Q9UBY0 812 aa13.06□□□□□ -0.32
HERC1-214ENST00000561400 PCDHA7Q9UN72 937 aa13.06□□□□□ -0.32
HERC1-214ENST00000561400 MYH9P35579 1960 aaKnown RBP13.05□□□□□ -0.32
HERC1-214ENST00000561400 EML1O00423 815 aa13.05□□□□□ -0.32
HERC1-214ENST00000561400 GH1P01241 217 aa13.05□□□□□ -0.32
HERC1-214ENST00000561400 CALRP27797 417 aaKnown RBP13.05□□□□□ -0.32
HERC1-214ENST00000561400 PPP2R5CQ13362 524 aa13.05□□□□□ -0.32
HERC1-214ENST00000561400 IGSF22Q8N9C0 903 aa13.05□□□□□ -0.32
HERC1-214ENST00000561400 FERMT2Q96AC1 680 aa13.05□□□□□ -0.32
HERC1-214ENST00000561400 UNC93B1Q9H1C4 597 aa13.05□□□□□ -0.32
HERC1-214ENST00000561400 NKRFO15226 690 aaKnown RBP eCLIP13.05□□□□□ -0.32
HERC1-214ENST00000561400 DYNC1LI2O43237 492 aaPredicted RBP13.05□□□□□ -0.32
HERC1-214ENST00000561400 CHMP2AO43633 222 aa13.05□□□□□ -0.32
HERC1-214ENST00000561400 NRDCO43847 1150 aa13.05□□□□□ -0.32
HERC1-214ENST00000561400 DUSP11O75319 330 aaKnown RBP13.05□□□□□ -0.32
HERC1-214ENST00000561400 CDC25AP30304 524 aa13.05□□□□□ -0.32
HERC1-214ENST00000561400 GTF2F1P35269 517 aaKnown RBP eCLIP13.05□□□□□ -0.32
HERC1-214ENST00000561400 ME1P48163 572 aa13.05□□□□□ -0.32
HERC1-214ENST00000561400 SETDB1Q15047 1291 aa13.05□□□□□ -0.32
HERC1-214ENST00000561400 TLK2Q86UE8 772 aa13.05□□□□□ -0.32
HERC1-214ENST00000561400 KRI1Q8N9T8 703 aaKnown RBP13.05□□□□□ -0.32
HERC1-214ENST00000561400 EMID1Q96A84 441 aaPredicted RBP13.05□□□□□ -0.32
HERC1-214ENST00000561400 CSRNP2Q9H175 543 aa13.05□□□□□ -0.32
HERC1-214ENST00000561400 SPDYE4A6NLX3 237 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 PP2D1A8MPX8 630 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 ACTR2P61160 394 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 KRT76Q01546 638 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 LAMC2Q13753 1193 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 PDIA5Q14554 519 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 TMEM266Q2M3C6 531 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 SPECC1Q5M775 1068 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 LHX8Q68G74 356 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 ZNF746Q6NUN9 644 aaPredicted RBP13.04□□□□□ -0.32
HERC1-214ENST00000561400 OR6J1Q8NGC5 347 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 AFG1LQ8WV93 481 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 ZNF333Q96JL9 665 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 SPATA33Q96N06 139 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.04□□□□□ -0.322e-6■■□□□ 13.3
HERC1-214ENST00000561400 DDX20Q9UHI6 824 aaKnown RBP13.04□□□□□ -0.32
HERC1-214ENST00000561400 GSTTP1A0A1W2PQM5 241 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 RARBP10826 455 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 NCAPH2Q6IBW4 605 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 USP49Q70CQ1 688 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 ARMC5Q96C12 935 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 GPR20Q99678 358 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 MCOLN1Q9GZU1 580 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 LRWD1Q9UFC0 647 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 SUFUQ9UMX1 484 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 Q9Y3F1 56 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 ELP1O95163 1332 aa13.04□□□□□ -0.32
HERC1-214ENST00000561400 DNAH12Q6ZR08 3092 aa13.03□□□□□ -0.32
HERC1-214ENST00000561400 CTAGE5O15320 804 aa13.03□□□□□ -0.32
HERC1-214ENST00000561400 ATG7O95352 703 aa13.03□□□□□ -0.32
HERC1-214ENST00000561400 PGK1P00558 417 aa13.03□□□□□ -0.32
HERC1-214ENST00000561400 CCL5P13501 91 aa13.03□□□□□ -0.32
HERC1-214ENST00000561400 C11orf91Q3C1V1 193 aa13.03□□□□□ -0.32
HERC1-214ENST00000561400 ABHD15Q6UXT9 468 aa13.03□□□□□ -0.32
HERC1-214ENST00000561400 PAK6Q9NQU5 681 aaPredicted RBP13.03□□□□□ -0.32
HERC1-214ENST00000561400 DISC1Q9NRI5 854 aa13.03□□□□□ -0.32
HERC1-214ENST00000561400 SYNRGQ9UMZ2 1314 aa13.03□□□□□ -0.32
HERC1-214ENST00000561400 KIAA0100Q14667 2235 aaKnown RBP13.03□□□□□ -0.32
HERC1-214ENST00000561400 MYADML2A6NDP7 307 aa13.03□□□□□ -0.32
HERC1-214ENST00000561400 CUTAO60888 179 aa13.03□□□□□ -0.32
HERC1-214ENST00000561400 LONP1P36776 959 aaKnown RBP13.03□□□□□ -0.32
HERC1-214ENST00000561400 GJA9P57773 515 aa13.03□□□□□ -0.32
HERC1-214ENST00000561400 SHC4Q6S5L8 630 aa13.03□□□□□ -0.32
HERC1-214ENST00000561400 MIER3Q7Z3K6 550 aa13.03□□□□□ -0.32
HERC1-214ENST00000561400 PPTC7Q8NI37 304 aa13.03□□□□□ -0.32
HERC1-214ENST00000561400 EPSTI1Q96J88 318 aa13.03□□□□□ -0.32
HERC1-214ENST00000561400 GBP4Q96PP9 640 aa13.03□□□□□ -0.32
HERC1-214ENST00000561400 MMTAG2Q9BU76 263 aaKnown RBP13.03□□□□□ -0.32
HERC1-214ENST00000561400 GZF1Q9H116 711 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms