RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 IL18BPO95998 194 aa7.47□□□□□ -1.21
HMBOX1-216ENST00000561377 ZNF568Q3ZCX4 644 aa7.47□□□□□ -1.21
HMBOX1-216ENST00000561377 DPP8Q6V1X1 898 aaPredicted RBP7.47□□□□□ -1.21
HMBOX1-216ENST00000561377 ARHGAP36Q6ZRI8 547 aa7.47□□□□□ -1.21
HMBOX1-216ENST00000561377 EP400NLQ6ZTU2 488 aa7.47□□□□□ -1.21
HMBOX1-216ENST00000561377 SH3RF3Q8TEJ3 882 aaPredicted RBP7.47□□□□□ -1.21
HMBOX1-216ENST00000561377 PTPN18Q99952 460 aa7.47□□□□□ -1.21
HMBOX1-216ENST00000561377 TANGO6Q9C0B7 1094 aa7.47□□□□□ -1.21
HMBOX1-216ENST00000561377 KATNBL1Q9H079 304 aa7.47□□□□□ -1.21
HMBOX1-216ENST00000561377 SEMA4AQ9H3S1 761 aa7.47□□□□□ -1.21
HMBOX1-216ENST00000561377 RIC8BQ9NVN3 520 aa7.47□□□□□ -1.21
HMBOX1-216ENST00000561377 SIRPGQ9P1W8 387 aa7.47□□□□□ -1.21
HMBOX1-216ENST00000561377 CCDC85CA6NKD9 419 aa7.46□□□□□ -1.22
HMBOX1-216ENST00000561377 PATE3B3GLJ2 98 aa7.46□□□□□ -1.22
HMBOX1-216ENST00000561377 GSTA4O15217 222 aa7.46□□□□□ -1.22
HMBOX1-216ENST00000561377 PTPN1P18031 435 aaKnown RBP7.46□□□□□ -1.22
HMBOX1-216ENST00000561377 GJA4P35212 333 aa7.46□□□□□ -1.22
HMBOX1-216ENST00000561377 SELENOPP49908 381 aa7.46□□□□□ -1.22
HMBOX1-216ENST00000561377 GABREP78334 506 aa7.46□□□□□ -1.22
HMBOX1-216ENST00000561377 GUCY1A3Q02108 690 aa7.46□□□□□ -1.22
HMBOX1-216ENST00000561377 DBPQ10586 325 aaPredicted RBP7.46□□□□□ -1.22
HMBOX1-216ENST00000561377 FAM209AQ5JX71 171 aa7.46□□□□□ -1.22
HMBOX1-216ENST00000561377 ZNF585AQ6P3V2 769 aa7.46□□□□□ -1.22
HMBOX1-216ENST00000561377 C16orf59Q7L2K0 433 aa7.46□□□□□ -1.22
HMBOX1-216ENST00000561377 GPR155Q7Z3F1 870 aa7.46□□□□□ -1.22
HMBOX1-216ENST00000561377 SLC39A2Q9NP94 309 aa7.46□□□□□ -1.22
HMBOX1-216ENST00000561377 CATSPERZQ9NTU4 200 aa7.46□□□□□ -1.22
HMBOX1-216ENST00000561377 ARHGAP28Q9P2N2 729 aa7.46□□□□□ -1.22
HMBOX1-216ENST00000561377 ARVCFO00192 962 aa7.45□□□□□ -1.22
HMBOX1-216ENST00000561377 CUTAO60888 179 aa7.45□□□□□ -1.22
HMBOX1-216ENST00000561377 ZNF623O75123 536 aa7.45□□□□□ -1.22
HMBOX1-216ENST00000561377 C6orf222P0C671 652 aaPredicted RBP7.45□□□□□ -1.22
HMBOX1-216ENST00000561377 ST5P78524 1137 aa7.45□□□□□ -1.22
HMBOX1-216ENST00000561377 USP10Q14694 798 aaKnown RBP7.45□□□□□ -1.22
HMBOX1-216ENST00000561377 CDSNQ15517 529 aa7.45□□□□□ -1.22
HMBOX1-216ENST00000561377 FIGNQ5HY92 759 aa7.45□□□□□ -1.22
HMBOX1-216ENST00000561377 PCDH19Q8TAB3 1148 aa7.45□□□□□ -1.22
HMBOX1-216ENST00000561377 LMF1Q96S06 567 aa7.45□□□□□ -1.22
HMBOX1-216ENST00000561377 PCDHA8Q9Y5H6 950 aa7.45□□□□□ -1.22
HMBOX1-216ENST00000561377 ATP23Q9Y6H3 246 aa7.45□□□□□ -1.22
HMBOX1-216ENST00000561377 APPP05067 770 aa7.44□□□□□ -1.22
HMBOX1-216ENST00000561377 POLD1P28340 1107 aa7.44□□□□□ -1.22
HMBOX1-216ENST00000561377 LONRF2Q1L5Z9 754 aa7.44□□□□□ -1.22
HMBOX1-216ENST00000561377 FAM47CQ5HY64 1035 aa7.44□□□□□ -1.22
HMBOX1-216ENST00000561377 FOXB2Q5VYV0 432 aa7.44□□□□□ -1.22
HMBOX1-216ENST00000561377 SPRED1Q7Z699 444 aa7.44□□□□□ -1.22
HMBOX1-216ENST00000561377 HIRIP3Q9BW71 556 aaPredicted RBP7.44□□□□□ -1.22
HMBOX1-216ENST00000561377 CARD11Q9BXL7 1154 aa7.44□□□□□ -1.22
HMBOX1-216ENST00000561377 SRRDQ9UH36 339 aa7.44□□□□□ -1.22
HMBOX1-216ENST00000561377 FAM90A27PA6NNH2 459 aa7.43□□□□□ -1.22
HMBOX1-216ENST00000561377 MAN2B1O00754 1011 aa7.43□□□□□ -1.22
HMBOX1-216ENST00000561377 MUSKO15146 869 aa7.43□□□□□ -1.22
HMBOX1-216ENST00000561377 PYGMP11217 842 aa7.43□□□□□ -1.22
HMBOX1-216ENST00000561377 PDE6AP16499 860 aa7.43□□□□□ -1.22
HMBOX1-216ENST00000561377 CRY1Q16526 586 aa7.43□□□□□ -1.22
HMBOX1-216ENST00000561377 HS1BP3Q53T59 392 aa7.43□□□□□ -1.22
HMBOX1-216ENST00000561377 PALM2Q8IXS6 379 aa7.43□□□□□ -1.22
HMBOX1-216ENST00000561377 EXOC2Q96KP1 924 aa7.43□□□□□ -1.22
HMBOX1-216ENST00000561377 DHRS4Q9BTZ2 278 aa7.43□□□□□ -1.22
HMBOX1-216ENST00000561377 ESYT3A0FGR9 886 aa7.42□□□□□ -1.22
HMBOX1-216ENST00000561377 DIAPH1O60610 1272 aaKnown RBP7.42□□□□□ -1.22
HMBOX1-216ENST00000561377 AMY2AP04746 511 aa7.42□□□□□ -1.22
HMBOX1-216ENST00000561377 SRGAP2CP0DJJ0 459 aa7.42□□□□□ -1.22
HMBOX1-216ENST00000561377 KRT15P19012 456 aa7.42□□□□□ -1.22
HMBOX1-216ENST00000561377 AMY2BP19961 511 aa7.42□□□□□ -1.22
HMBOX1-216ENST00000561377 ZC3H12BQ5HYM0 836 aaKnown RBP7.42□□□□□ -1.22
HMBOX1-216ENST00000561377 OSTM1Q86WC4 334 aa7.42□□□□□ -1.22
HMBOX1-216ENST00000561377 PTRH1Q86Y79 214 aaKnown RBP7.42□□□□□ -1.22
HMBOX1-216ENST00000561377 GIMAP8Q8ND71 665 aaPredicted RBP7.42□□□□□ -1.22
HMBOX1-216ENST00000561377 Q8TCH9 128 aa7.42□□□□□ -1.22
HMBOX1-216ENST00000561377 LRRC37BQ96QE4 947 aa7.42□□□□□ -1.22
HMBOX1-216ENST00000561377 CBLCQ9ULV8 474 aa7.42□□□□□ -1.22
HMBOX1-216ENST00000561377 KDM2BQ8NHM5 1336 aa7.42□□□□□ -1.22
HMBOX1-216ENST00000561377 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.41□□□□□ -1.22
HMBOX1-216ENST00000561377 AKAP8O43823 692 aaKnown RBP7.41□□□□□ -1.22
HMBOX1-216ENST00000561377 FAM153BP0C7A2 387 aa7.41□□□□□ -1.22
HMBOX1-216ENST00000561377 ZNF888P0CJ79 500 aaPredicted RBP7.41□□□□□ -1.22
HMBOX1-216ENST00000561377 PTGS1P23219 599 aa7.41□□□□□ -1.22
HMBOX1-216ENST00000561377 TOP3AQ13472 1001 aaPredicted RBP7.41□□□□□ -1.22
HMBOX1-216ENST00000561377 WDR72Q3MJ13 1102 aa7.41□□□□□ -1.22
HMBOX1-216ENST00000561377 ZMAT1Q5H9K5 638 aa7.41□□□□□ -1.22
HMBOX1-216ENST00000561377 ZC3H7AQ8IWR0 971 aaKnown RBP7.41□□□□□ -1.22
HMBOX1-216ENST00000561377 ARMC5Q96C12 935 aa7.41□□□□□ -1.22
HMBOX1-216ENST00000561377 GNRHR2Q96P88 292 aa7.41□□□□□ -1.22
HMBOX1-216ENST00000561377 MRPS23Q9Y3D9 190 aaKnown RBP7.41□□□□□ -1.22
HMBOX1-216ENST00000561377 TESMINQ9Y4I5 508 aa7.41□□□□□ -1.22
HMBOX1-216ENST00000561377 PCDHA9Q9Y5H5 950 aa7.41□□□□□ -1.22
HMBOX1-216ENST00000561377 CCDC66A2RUB6 948 aa7.4□□□□□ -1.22
HMBOX1-216ENST00000561377 PRAMEF25A6NGN4 478 aa7.4□□□□□ -1.22
HMBOX1-216ENST00000561377 ZNF561-AS1K7EIQ3 104 aa7.4□□□□□ -1.22
HMBOX1-216ENST00000561377 CLASP2O75122 1294 aaKnown RBP7.4□□□□□ -1.22
HMBOX1-216ENST00000561377 CRTAMO95727 393 aa7.4□□□□□ -1.22
HMBOX1-216ENST00000561377 FSHBP01225 129 aa7.4□□□□□ -1.22
HMBOX1-216ENST00000561377 C6P13671 934 aa7.4□□□□□ -1.22
HMBOX1-216ENST00000561377 TACR2P21452 398 aa7.4□□□□□ -1.22
HMBOX1-216ENST00000561377 GTF2F1P35269 517 aaKnown RBP eCLIP7.4□□□□□ -1.22
HMBOX1-216ENST00000561377 JAM2P57087 298 aa7.4□□□□□ -1.22
HMBOX1-216ENST00000561377 RAC3P60763 192 aa7.4□□□□□ -1.22
HMBOX1-216ENST00000561377 HERVK_113P62684 666 aa7.4□□□□□ -1.22
HMBOX1-216ENST00000561377 R3HDM1Q15032 1099 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms