RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 CAGE1Q8TC20 777 aa22.53■■□□□ 1.2
TSPAN3-210ENST00000561277 LMBR1Q8WVP7 490 aa22.53■■□□□ 1.2
TSPAN3-210ENST00000561277 TRPC6Q9Y210 931 aa22.53■■□□□ 1.2
TSPAN3-210ENST00000561277 TANC1Q9C0D5 1861 aa22.53■■□□□ 1.2
TSPAN3-210ENST00000561277 GCFC2P16383 781 aaKnown RBP22.52■■□□□ 1.2
TSPAN3-210ENST00000561277 PPP4R3AQ6IN85 833 aa22.52■■□□□ 1.2
TSPAN3-210ENST00000561277 SMAP1Q8IYB5 467 aaPredicted RBP22.52■■□□□ 1.2
TSPAN3-210ENST00000561277 ETNPPLQ8TBG4 499 aa22.52■■□□□ 1.2
TSPAN3-210ENST00000561277 RIT2Q99578 217 aa22.52■■□□□ 1.2
TSPAN3-210ENST00000561277 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.52■■□□□ 1.22e-7■■■■□ 20.1
TSPAN3-210ENST00000561277 ZNF302Q9NR11 478 aa22.52■■□□□ 1.2
TSPAN3-210ENST00000561277 NRCAMQ92823 1304 aa22.52■■□□□ 1.2
TSPAN3-210ENST00000561277 IGKV6D-21A0A0A0MT36 114 aa22.51■■□□□ 1.19
TSPAN3-210ENST00000561277 IGBP1P78318 339 aa22.51■■□□□ 1.19
TSPAN3-210ENST00000561277 FAM160B1Q5W0V3 765 aa22.51■■□□□ 1.19
TSPAN3-210ENST00000561277 SWSAP1Q6NVH7 229 aa22.51■■□□□ 1.19
TSPAN3-210ENST00000561277 PLPPR4Q7Z2D5 763 aa22.51■■□□□ 1.19
TSPAN3-210ENST00000561277 DEFB128Q7Z7B8 93 aa22.51■■□□□ 1.19
TSPAN3-210ENST00000561277 SERINC5Q86VE9 423 aa22.51■■□□□ 1.19
TSPAN3-210ENST00000561277 FBXO18Q8NFZ0 1043 aa22.51■■□□□ 1.19
TSPAN3-210ENST00000561277 RNPC3Q96LT9 517 aaKnown RBP22.51■■□□□ 1.19
TSPAN3-210ENST00000561277 NAP1L4Q99733 375 aaKnown RBP22.51■■□□□ 1.19
TSPAN3-210ENST00000561277 UNC45AQ9H3U1 944 aa22.51■■□□□ 1.19
TSPAN3-210ENST00000561277 IL23AQ9NPF7 189 aa22.51■■□□□ 1.19
TSPAN3-210ENST00000561277 WDR64B1ANS9 1081 aa22.5■■□□□ 1.19
TSPAN3-210ENST00000561277 PSAPP07602 524 aa22.5■■□□□ 1.19
TSPAN3-210ENST00000561277 IQCF3P0C7M6 154 aa22.5■■□□□ 1.19
TSPAN3-210ENST00000561277 CKBP12277 381 aa22.5■■□□□ 1.19
TSPAN3-210ENST00000561277 FXR1P51114 621 aaKnown RBP eCLIP22.5■■□□□ 1.19
TSPAN3-210ENST00000561277 PLCB4Q15147 1175 aa22.5■■□□□ 1.19
TSPAN3-210ENST00000561277 GRIK4Q16099 956 aa22.5■■□□□ 1.19
TSPAN3-210ENST00000561277 PDXDC2PQ6P474 469 aa22.5■■□□□ 1.19
TSPAN3-210ENST00000561277 LRRC8DQ7L1W4 858 aa22.5■■□□□ 1.19
TSPAN3-210ENST00000561277 C16orf59Q7L2K0 433 aa22.5■■□□□ 1.19
TSPAN3-210ENST00000561277 AFAP1L1Q8TED9 768 aa22.5■■□□□ 1.19
TSPAN3-210ENST00000561277 SCN5AQ14524 2016 aa22.5■■□□□ 1.19
TSPAN3-210ENST00000561277 PSMD10O75832 226 aa22.5■■□□□ 1.19
TSPAN3-210ENST00000561277 GNL2Q13823 731 aaKnown RBP22.5■■□□□ 1.19
TSPAN3-210ENST00000561277 TRIM71Q2Q1W2 868 aaKnown RBP22.5■■□□□ 1.19
TSPAN3-210ENST00000561277 PSRC1Q6PGN9 363 aaPredicted RBP22.5■■□□□ 1.19
TSPAN3-210ENST00000561277 ZNF365Q70YC5 407 aa22.5■■□□□ 1.19
TSPAN3-210ENST00000561277 POTEDQ86YR6 584 aa22.5■■□□□ 1.19
TSPAN3-210ENST00000561277 CKAP2LQ8IYA6 745 aa22.5■■□□□ 1.19
TSPAN3-210ENST00000561277 KIF3AQ9Y496 699 aa22.5■■□□□ 1.19
TSPAN3-210ENST00000561277 PCDHA10Q9Y5I2 948 aa22.5■■□□□ 1.19
TSPAN3-210ENST00000561277 SZT2Q5T011 3432 aa22.49■■□□□ 1.19
TSPAN3-210ENST00000561277 SOX1O00570 391 aaPredicted RBP22.49■■□□□ 1.19
TSPAN3-210ENST00000561277 MARCH6O60337 910 aa22.49■■□□□ 1.19
TSPAN3-210ENST00000561277 INSRRP14616 1297 aa22.49■■□□□ 1.19
TSPAN3-210ENST00000561277 SELPP16109 830 aa22.49■■□□□ 1.19
TSPAN3-210ENST00000561277 GJB2P29033 226 aa22.49■■□□□ 1.19
TSPAN3-210ENST00000561277 THPOP40225 353 aa22.49■■□□□ 1.19
TSPAN3-210ENST00000561277 SLC26A2P50443 739 aa22.49■■□□□ 1.19
TSPAN3-210ENST00000561277 ADAM17P78536 824 aa22.49■■□□□ 1.19
TSPAN3-210ENST00000561277 RBL2Q08999 1139 aa22.49■■□□□ 1.19
TSPAN3-210ENST00000561277 TMEM240Q5SV17 173 aa22.49■■□□□ 1.19
TSPAN3-210ENST00000561277 TRMT1LQ7Z2T5 733 aaKnown RBP22.49■■□□□ 1.19
TSPAN3-210ENST00000561277 DISC1Q9NRI5 854 aa22.49■■□□□ 1.19
TSPAN3-210ENST00000561277 GABBR1Q9UBS5 961 aa22.49■■□□□ 1.19
TSPAN3-210ENST00000561277 TUBE1Q9UJT0 475 aa22.49■■□□□ 1.19
TSPAN3-210ENST00000561277 KAT6AQ92794 2004 aa22.48■■□□□ 1.19
TSPAN3-210ENST00000561277 POTEB3A0JP26 581 aa22.48■■□□□ 1.19
TSPAN3-210ENST00000561277 WNT7AO00755 349 aa22.48■■□□□ 1.19
TSPAN3-210ENST00000561277 ATP2B1P20020 1258 aa22.48■■□□□ 1.19
TSPAN3-210ENST00000561277 JAK3P52333 1124 aa22.48■■□□□ 1.19
TSPAN3-210ENST00000561277 LRIT3Q3SXY7 679 aa22.48■■□□□ 1.19
TSPAN3-210ENST00000561277 ZNF618Q5T7W0 954 aa22.48■■□□□ 1.19
TSPAN3-210ENST00000561277 POTEBQ6S5H4 581 aa22.48■■□□□ 1.19
TSPAN3-210ENST00000561277 RPUSD2Q8IZ73 545 aaKnown RBP22.48■■□□□ 1.19
TSPAN3-210ENST00000561277 TRAPPC12Q8WVT3 735 aa22.48■■□□□ 1.19
TSPAN3-210ENST00000561277 ZBTB10Q96DT7 871 aa22.48■■□□□ 1.19
TSPAN3-210ENST00000561277 KCNMB3Q9NPA1 279 aa22.48■■□□□ 1.19
TSPAN3-210ENST00000561277 RBAK-RBAKDNI3L0D1 243 aa22.47■■□□□ 1.19
TSPAN3-210ENST00000561277 OTOP2Q7RTS6 562 aa22.47■■□□□ 1.19
TSPAN3-210ENST00000561277 MIER3Q7Z3K6 550 aa22.47■■□□□ 1.19
TSPAN3-210ENST00000561277 TNPO1Q92973 898 aaKnown RBP22.47■■□□□ 1.19
TSPAN3-210ENST00000561277 LRCH3Q96II8 777 aa22.47■■□□□ 1.19
TSPAN3-210ENST00000561277 FOXP1Q9H334 677 aaPredicted RBP22.47■■□□□ 1.19
TSPAN3-210ENST00000561277 SMC3Q9UQE7 1217 aa22.47■■□□□ 1.19
TSPAN3-210ENST00000561277 IGSF9BQ9UPX0 1349 aa22.47■■□□□ 1.19
TSPAN3-210ENST00000561277 FGBP02675 491 aa22.46■■□□□ 1.19
TSPAN3-210ENST00000561277 CTSHP09668 335 aa22.46■■□□□ 1.19
TSPAN3-210ENST00000561277 SFNP31947 248 aa22.46■■□□□ 1.19
TSPAN3-210ENST00000561277 RFC2P35250 354 aa22.46■■□□□ 1.19
TSPAN3-210ENST00000561277 MARCH8Q5T0T0 291 aa22.46■■□□□ 1.19
TSPAN3-210ENST00000561277 RUFY4Q6ZNE9 571 aa22.46■■□□□ 1.19
TSPAN3-210ENST00000561277 ATP8B4Q8TF62 1192 aa22.46■■□□□ 1.19
TSPAN3-210ENST00000561277 VWCEQ96DN2 955 aa22.46■■□□□ 1.19
TSPAN3-210ENST00000561277 FAM20AQ96MK3 541 aa22.46■■□□□ 1.19
TSPAN3-210ENST00000561277 FTOQ9C0B1 505 aaKnown RBP eCLIP22.46■■□□□ 1.19
TSPAN3-210ENST00000561277 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.46■■□□□ 1.19
TSPAN3-210ENST00000561277 MAFBQ9Y5Q3 323 aaPredicted RBP22.46■■□□□ 1.19
TSPAN3-210ENST00000561277 RRN3P2A6NIE6 340 aa22.46■■□□□ 1.19
TSPAN3-210ENST00000561277 KIF28PB7ZC32 967 aa22.46■■□□□ 1.19
TSPAN3-210ENST00000561277 ATP4AP20648 1035 aa22.46■■□□□ 1.19
TSPAN3-210ENST00000561277 HAS1Q92839 578 aa22.46■■□□□ 1.19
TSPAN3-210ENST00000561277 TBX3O15119 743 aa22.45■■□□□ 1.18
TSPAN3-210ENST00000561277 HBP1O60381 514 aa22.45■■□□□ 1.18
TSPAN3-210ENST00000561277 NEMFO60524 1076 aa22.45■■□□□ 1.18
TSPAN3-210ENST00000561277 PFKMP08237 780 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms