RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 TRAPPC12Q8WVT3 735 aa15.74■□□□□ 0.11
TPM1-230ENST00000561266 GLG1Q92896 1179 aa15.74■□□□□ 0.11
TPM1-230ENST00000561266 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.74■□□□□ 0.111e-6■□□□□ 10.6
TPM1-230ENST00000561266 SMARCAD1Q9H4L7 1026 aa15.74■□□□□ 0.11
TPM1-230ENST00000561266 KCNMB3Q9NPA1 279 aa15.74■□□□□ 0.11
TPM1-230ENST00000561266 TBC1D22BQ9NU19 505 aa15.74■□□□□ 0.11
TPM1-230ENST00000561266 SZT2Q5T011 3432 aa15.74■□□□□ 0.11
TPM1-230ENST00000561266 C17orf102A2RUQ5 167 aa15.73■□□□□ 0.11
TPM1-230ENST00000561266 EML1O00423 815 aa15.73■□□□□ 0.11
TPM1-230ENST00000561266 CCNT1O60563 726 aaKnown RBP15.73■□□□□ 0.11
TPM1-230ENST00000561266 GJB2P29033 226 aa15.73■□□□□ 0.11
TPM1-230ENST00000561266 MCM2P49736 904 aa15.73■□□□□ 0.11
TPM1-230ENST00000561266 FXR1P51114 621 aaKnown RBP eCLIP15.73■□□□□ 0.11
TPM1-230ENST00000561266 CUL4AQ13619 759 aa15.73■□□□□ 0.11
TPM1-230ENST00000561266 TRIM29Q14134 588 aa15.73■□□□□ 0.11
TPM1-230ENST00000561266 MBTPS1Q14703 1052 aa15.73■□□□□ 0.11
TPM1-230ENST00000561266 TMEM240Q5SV17 173 aa15.73■□□□□ 0.11
TPM1-230ENST00000561266 LRCH2Q5VUJ6 765 aa15.73■□□□□ 0.11
TPM1-230ENST00000561266 PPP4R3AQ6IN85 833 aa15.73■□□□□ 0.11
TPM1-230ENST00000561266 ZNF746Q6NUN9 644 aaPredicted RBP15.73■□□□□ 0.11
TPM1-230ENST00000561266 SERINC5Q86VE9 423 aa15.73■□□□□ 0.11
TPM1-230ENST00000561266 TDHQ8IZJ6 230 aa15.73■□□□□ 0.11
TPM1-230ENST00000561266 FAM184AQ8NB25 1140 aa15.73■□□□□ 0.11
TPM1-230ENST00000561266 ATP6V0A1Q93050 837 aa15.73■□□□□ 0.11
TPM1-230ENST00000561266 RIT2Q99578 217 aa15.73■□□□□ 0.11
TPM1-230ENST00000561266 ERAP1Q9NZ08 941 aa15.73■□□□□ 0.11
TPM1-230ENST00000561266 PTPRSQ13332 1948 aa15.72■□□□□ 0.11
TPM1-230ENST00000561266 ZBTB42B2RXF5 422 aa15.72■□□□□ 0.11
TPM1-230ENST00000561266 CHMP2AO43633 222 aa15.72■□□□□ 0.11
TPM1-230ENST00000561266 ZNF862O60290 1169 aa15.72■□□□□ 0.11
TPM1-230ENST00000561266 GAS7O60861 476 aa15.72■□□□□ 0.11
TPM1-230ENST00000561266 IQCF3P0C7M6 154 aa15.72■□□□□ 0.11
TPM1-230ENST00000561266 CKBP12277 381 aa15.72■□□□□ 0.11
TPM1-230ENST00000561266 INSRRP14616 1297 aa15.72■□□□□ 0.11
TPM1-230ENST00000561266 PTK7Q13308 1070 aa15.72■□□□□ 0.11
TPM1-230ENST00000561266 GRIK4Q16099 956 aa15.72■□□□□ 0.11
TPM1-230ENST00000561266 ZNF618Q5T7W0 954 aa15.72■□□□□ 0.11
TPM1-230ENST00000561266 ZNF365Q70YC5 407 aa15.72■□□□□ 0.11
TPM1-230ENST00000561266 PLPPR4Q7Z2D5 763 aa15.72■□□□□ 0.11
TPM1-230ENST00000561266 AFAP1L1Q8TED9 768 aa15.72■□□□□ 0.11
TPM1-230ENST00000561266 LRCH3Q96II8 777 aa15.72■□□□□ 0.11
TPM1-230ENST00000561266 TMEM60Q9H2L4 133 aa15.72■□□□□ 0.11
TPM1-230ENST00000561266 VAV3Q9UKW4 847 aa15.72■□□□□ 0.11
TPM1-230ENST00000561266 ZNF215Q9UL58 517 aaPredicted RBP15.72■□□□□ 0.11
TPM1-230ENST00000561266 NOD1Q9Y239 953 aa15.72■□□□□ 0.11
TPM1-230ENST00000561266 BACH1O14867 736 aa15.71■□□□□ 0.11
TPM1-230ENST00000561266 STBD1O95210 358 aa15.71■□□□□ 0.11
TPM1-230ENST00000561266 ATP2B1P20020 1258 aa15.71■□□□□ 0.11
TPM1-230ENST00000561266 TOB1P50616 345 aaPredicted RBP15.71■□□□□ 0.11
TPM1-230ENST00000561266 IGBP1P78318 339 aa15.71■□□□□ 0.11
TPM1-230ENST00000561266 KRT76Q01546 638 aa15.71■□□□□ 0.11
TPM1-230ENST00000561266 RBL2Q08999 1139 aa15.71■□□□□ 0.11
TPM1-230ENST00000561266 PPFIA1Q13136 1202 aa15.71■□□□□ 0.11
TPM1-230ENST00000561266 NBR1Q14596 966 aa15.71■□□□□ 0.11
TPM1-230ENST00000561266 TRMT1LQ7Z2T5 733 aaKnown RBP15.71■□□□□ 0.11
TPM1-230ENST00000561266 DEFB128Q7Z7B8 93 aa15.71■□□□□ 0.11
TPM1-230ENST00000561266 TMEM199Q8N511 208 aa15.71■□□□□ 0.11
TPM1-230ENST00000561266 IL27Q8NEV9 243 aa15.71■□□□□ 0.11
TPM1-230ENST00000561266 TEKT3Q9BXF9 490 aa15.71■□□□□ 0.11
TPM1-230ENST00000561266 BRMS1Q9HCU9 246 aa15.71■□□□□ 0.11
TPM1-230ENST00000561266 IL23AQ9NPF7 189 aa15.71■□□□□ 0.11
TPM1-230ENST00000561266 ZNF302Q9NR11 478 aa15.71■□□□□ 0.11
TPM1-230ENST00000561266 DISC1Q9NRI5 854 aa15.71■□□□□ 0.11
TPM1-230ENST00000561266 GABBR1Q9UBS5 961 aa15.71■□□□□ 0.11
TPM1-230ENST00000561266 PCDHA10Q9Y5I2 948 aa15.71■□□□□ 0.11
TPM1-230ENST00000561266 MAFBQ9Y5Q3 323 aaPredicted RBP15.71■□□□□ 0.11
TPM1-230ENST00000561266 GBF1Q92538 1859 aa15.71■□□□□ 0.11
TPM1-230ENST00000561266 MBLAC1A4D2B0 266 aaPredicted RBP15.7■□□□□ 0.1
TPM1-230ENST00000561266 PITPNM1O00562 1244 aa15.7■□□□□ 0.1
TPM1-230ENST00000561266 NBNO60934 754 aa15.7■□□□□ 0.1
TPM1-230ENST00000561266 GCFC2P16383 781 aaKnown RBP15.7■□□□□ 0.1
TPM1-230ENST00000561266 SPIRE1Q08AE8 756 aa15.7■□□□□ 0.1
TPM1-230ENST00000561266 PPIGQ13427 754 aaKnown RBP eCLIP15.7■□□□□ 0.11e-7■■□□□ 14.5
TPM1-230ENST00000561266 FAM109BQ6ICB4 259 aaPredicted RBP15.7■□□□□ 0.1
TPM1-230ENST00000561266 MIS18BP1Q6P0N0 1132 aa15.7■□□□□ 0.1
TPM1-230ENST00000561266 PDXDC2PQ6P474 469 aa15.7■□□□□ 0.1
TPM1-230ENST00000561266 FOXP1Q9H334 677 aaPredicted RBP15.7■□□□□ 0.1
TPM1-230ENST00000561266 AZI2Q9H6S1 392 aa15.7■□□□□ 0.1
TPM1-230ENST00000561266 CXXC1Q9P0U4 656 aaPredicted RBP15.7■□□□□ 0.1
TPM1-230ENST00000561266 NRCAMQ92823 1304 aa15.69■□□□□ 0.1
TPM1-230ENST00000561266 IGSF9BQ9UPX0 1349 aa15.69■□□□□ 0.1
TPM1-230ENST00000561266 A0A1W2PPC1 479 aa15.69■□□□□ 0.1
TPM1-230ENST00000561266 POTEB3A0JP26 581 aa15.69■□□□□ 0.1
TPM1-230ENST00000561266 TMEM150BA6NC51 233 aa15.69■□□□□ 0.1
TPM1-230ENST00000561266 WDR64B1ANS9 1081 aa15.69■□□□□ 0.1
TPM1-230ENST00000561266 PSAPP07602 524 aa15.69■□□□□ 0.1
TPM1-230ENST00000561266 SELPP16109 830 aa15.69■□□□□ 0.1
TPM1-230ENST00000561266 U2AF2P26368 475 aaKnown RBP eCLIP15.69■□□□□ 0.14e-8■■■■■ 38.8
TPM1-230ENST00000561266 BFSP2Q13515 415 aa15.69■□□□□ 0.1
TPM1-230ENST00000561266 ZNF174Q15697 407 aa15.69■□□□□ 0.1
TPM1-230ENST00000561266 RASIP1Q5U651 963 aa15.69■□□□□ 0.1
TPM1-230ENST00000561266 POTEBQ6S5H4 581 aa15.69■□□□□ 0.1
TPM1-230ENST00000561266 LRRC8DQ7L1W4 858 aa15.69■□□□□ 0.1
TPM1-230ENST00000561266 SMAP1Q8IYB5 467 aaPredicted RBP15.69■□□□□ 0.1
TPM1-230ENST00000561266 CAGE1Q8TC20 777 aa15.69■□□□□ 0.1
TPM1-230ENST00000561266 FAM20AQ96MK3 541 aa15.69■□□□□ 0.1
TPM1-230ENST00000561266 MTMR9Q96QG7 549 aa15.69■□□□□ 0.1
TPM1-230ENST00000561266 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
TPM1-230ENST00000561266 WRAP73Q9P2S5 460 aaPredicted RBP15.69■□□□□ 0.1
TPM1-230ENST00000561266 SMC3Q9UQE7 1217 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms