RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 PRR23AA6NEV1 266 aa11.49□□□□□ -0.57
TPM1-225ENST00000560679 TRIM6-TRIM34B2RNG4 842 aa11.49□□□□□ -0.57
TPM1-225ENST00000560679 SPATA31C2B4DYI2 1134 aa11.49□□□□□ -0.57
TPM1-225ENST00000560679 B4E1Z4 1266 aa11.49□□□□□ -0.57
TPM1-225ENST00000560679 ATF7P17544 494 aaPredicted RBP11.49□□□□□ -0.57
TPM1-225ENST00000560679 CD52P31358 61 aa11.49□□□□□ -0.57
TPM1-225ENST00000560679 GATMP50440 423 aa11.49□□□□□ -0.57
TPM1-225ENST00000560679 NAALADL2Q58DX5 795 aa11.49□□□□□ -0.57
TPM1-225ENST00000560679 UTP14CQ5TAP6 766 aaKnown RBP11.49□□□□□ -0.57
TPM1-225ENST00000560679 TSHZ1Q6ZSZ6 1077 aa11.49□□□□□ -0.57
TPM1-225ENST00000560679 RTN4RL1Q86UN2 441 aaPredicted RBP11.49□□□□□ -0.57
TPM1-225ENST00000560679 FCHSD1Q86WN1 690 aa11.49□□□□□ -0.57
TPM1-225ENST00000560679 IQCA1Q86XH1 822 aa11.49□□□□□ -0.57
TPM1-225ENST00000560679 ATP8B4Q8TF62 1192 aa11.49□□□□□ -0.57
TPM1-225ENST00000560679 ZBTB10Q96DT7 871 aa11.49□□□□□ -0.57
TPM1-225ENST00000560679 MAD2L2Q9UI95 211 aa11.49□□□□□ -0.57
TPM1-225ENST00000560679 ZNF215Q9UL58 517 aaPredicted RBP11.49□□□□□ -0.57
TPM1-225ENST00000560679 PCDHA1Q9Y5I3 950 aa11.49□□□□□ -0.57
TPM1-225ENST00000560679 CDY2AQ9Y6F7 541 aa11.49□□□□□ -0.57
TPM1-225ENST00000560679 NRCAMQ92823 1304 aa11.49□□□□□ -0.57
TPM1-225ENST00000560679 ZNF292O60281 2723 aa11.49□□□□□ -0.57
TPM1-225ENST00000560679 KAT6AQ92794 2004 aa11.48□□□□□ -0.57
TPM1-225ENST00000560679 MBLAC1A4D2B0 266 aaPredicted RBP11.48□□□□□ -0.57
TPM1-225ENST00000560679 ZBTB5O15062 677 aa11.48□□□□□ -0.57
TPM1-225ENST00000560679 GALR2O43603 387 aaPredicted RBP11.48□□□□□ -0.57
TPM1-225ENST00000560679 PDE1AP54750 535 aa11.48□□□□□ -0.57
TPM1-225ENST00000560679 SP4Q02446 784 aa11.48□□□□□ -0.57
TPM1-225ENST00000560679 NEDD9Q14511 834 aa11.48□□□□□ -0.57
TPM1-225ENST00000560679 MARCH8Q5T0T0 291 aa11.48□□□□□ -0.57
TPM1-225ENST00000560679 TAF2Q6P1X5 1199 aa11.48□□□□□ -0.57
TPM1-225ENST00000560679 NPAS4Q8IUM7 802 aa11.48□□□□□ -0.57
TPM1-225ENST00000560679 SAMD3Q8N6K7 520 aa11.48□□□□□ -0.57
TPM1-225ENST00000560679 DNAJB3Q8WWF6 145 aa11.48□□□□□ -0.57
TPM1-225ENST00000560679 FNDC1Q4ZHG4 1894 aaPredicted RBP11.48□□□□□ -0.57
TPM1-225ENST00000560679 LOXHD1Q8IVV2 1947 aa11.48□□□□□ -0.57
TPM1-225ENST00000560679 KLRF2D3W0D1 207 aa11.47□□□□□ -0.57
TPM1-225ENST00000560679 GCOM1H8Y6P7 765 aaPredicted RBP11.47□□□□□ -0.57
TPM1-225ENST00000560679 PER2O15055 1255 aa11.47□□□□□ -0.57
TPM1-225ENST00000560679 FIBPO43427 364 aa11.47□□□□□ -0.57
TPM1-225ENST00000560679 POLR2MP0CAP2 368 aa11.47□□□□□ -0.57
TPM1-225ENST00000560679 NBL1P41271 181 aa11.47□□□□□ -0.57
TPM1-225ENST00000560679 PPFIA1Q13136 1202 aa11.47□□□□□ -0.57
TPM1-225ENST00000560679 KCNC3Q14003 757 aa11.47□□□□□ -0.57
TPM1-225ENST00000560679 GRIK4Q16099 956 aa11.47□□□□□ -0.57
TPM1-225ENST00000560679 DUSP6Q16828 381 aa11.47□□□□□ -0.57
TPM1-225ENST00000560679 CCDC178Q5BJE1 867 aa11.47□□□□□ -0.57
TPM1-225ENST00000560679 HOMER1Q86YM7 354 aa11.47□□□□□ -0.57
TPM1-225ENST00000560679 TMEM105Q8N8V8 129 aa11.47□□□□□ -0.57
TPM1-225ENST00000560679 IRF2BPLQ9H1B7 796 aa11.47□□□□□ -0.57
TPM1-225ENST00000560679 S1PR5Q9H228 398 aa11.47□□□□□ -0.57
TPM1-225ENST00000560679 RTEL1Q9NZ71 1219 aa11.47□□□□□ -0.57
TPM1-225ENST00000560679 ZSWIM5Q9P217 1185 aa11.47□□□□□ -0.57
TPM1-225ENST00000560679 HCSTQ9UBK5 93 aa11.47□□□□□ -0.57
TPM1-225ENST00000560679 CDH22Q9UJ99 828 aa11.47□□□□□ -0.57
TPM1-225ENST00000560679 TUBE1Q9UJT0 475 aa11.47□□□□□ -0.57
TPM1-225ENST00000560679 BAZ2BQ9UIF8 2168 aaKnown RBP11.47□□□□□ -0.57
TPM1-225ENST00000560679 PALM3A6NDB9 673 aaPredicted RBP11.46□□□□□ -0.57
TPM1-225ENST00000560679 ZNF213O14771 459 aa11.46□□□□□ -0.57
TPM1-225ENST00000560679 CYTH3O43739 400 aa11.46□□□□□ -0.57
TPM1-225ENST00000560679 SP100P23497 879 aaPredicted RBP11.46□□□□□ -0.57
TPM1-225ENST00000560679 MARK3P27448 753 aa11.46□□□□□ -0.57
TPM1-225ENST00000560679 TCF7P36402 384 aaPredicted RBP11.46□□□□□ -0.57
TPM1-225ENST00000560679 NT5C2P49902 561 aa11.46□□□□□ -0.57
TPM1-225ENST00000560679 NUBP1P53384 320 aa11.46□□□□□ -0.57
TPM1-225ENST00000560679 MRPS6P82932 125 aaKnown RBP11.46□□□□□ -0.57
TPM1-225ENST00000560679 SEC23AQ15436 765 aa11.46□□□□□ -0.57
TPM1-225ENST00000560679 GNPTABQ3T906 1256 aa11.46□□□□□ -0.57
TPM1-225ENST00000560679 RIPOR3Q96MK2 946 aa11.46□□□□□ -0.57
TPM1-225ENST00000560679 PIGSQ96S52 555 aa11.46□□□□□ -0.57
TPM1-225ENST00000560679 TMX1Q9H3N1 280 aa11.46□□□□□ -0.57
TPM1-225ENST00000560679 SMOC2Q9H3U7 446 aa11.46□□□□□ -0.57
TPM1-225ENST00000560679 TLE6Q9H808 572 aa11.46□□□□□ -0.57
TPM1-225ENST00000560679 FRYLO94915 3013 aa11.46□□□□□ -0.58
TPM1-225ENST00000560679 FSCN2O14926 492 aa11.45□□□□□ -0.58
TPM1-225ENST00000560679 STAM2O75886 525 aa11.45□□□□□ -0.58
TPM1-225ENST00000560679 SCG2P13521 617 aa11.45□□□□□ -0.58
TPM1-225ENST00000560679 KCNA2P16389 499 aa11.45□□□□□ -0.58
TPM1-225ENST00000560679 ERVFC1P60507 584 aa11.45□□□□□ -0.58
TPM1-225ENST00000560679 SYCE2Q6PIF2 218 aa11.45□□□□□ -0.58
TPM1-225ENST00000560679 RSPH3Q86UC2 560 aa11.45□□□□□ -0.58
TPM1-225ENST00000560679 TICAM2Q86XR7 235 aa11.45□□□□□ -0.58
TPM1-225ENST00000560679 NEK1Q96PY6 1258 aa11.45□□□□□ -0.58
TPM1-225ENST00000560679 SENP7Q9BQF6 1050 aa11.45□□□□□ -0.58
TPM1-225ENST00000560679 FAM49AQ9H0Q0 323 aaPredicted RBP11.45□□□□□ -0.58
TPM1-225ENST00000560679 PADI3Q9ULW8 664 aa11.45□□□□□ -0.58
TPM1-225ENST00000560679 TRPC6Q9Y210 931 aa11.45□□□□□ -0.58
TPM1-225ENST00000560679 IGSF9BQ9UPX0 1349 aa11.44□□□□□ -0.58
TPM1-225ENST00000560679 ZFHX4Q86UP3 3567 aa11.44□□□□□ -0.58
TPM1-225ENST00000560679 GSTTP1A0A1W2PQM5 241 aa11.44□□□□□ -0.58
TPM1-225ENST00000560679 MGEA5O60502 916 aa11.44□□□□□ -0.58
TPM1-225ENST00000560679 PPFIA3O75145 1194 aa11.44□□□□□ -0.58
TPM1-225ENST00000560679 BRD1O95696 1058 aa11.44□□□□□ -0.58
TPM1-225ENST00000560679 UBE3AQ05086 875 aa11.44□□□□□ -0.58
TPM1-225ENST00000560679 TMEM62Q0P6H9 643 aa11.44□□□□□ -0.58
TPM1-225ENST00000560679 IFIT1BQ5T764 474 aaKnown RBP11.44□□□□□ -0.58
TPM1-225ENST00000560679 TMEM184AQ6ZMB5 413 aa11.44□□□□□ -0.58
TPM1-225ENST00000560679 ERMP1Q7Z2K6 904 aa11.44□□□□□ -0.58
TPM1-225ENST00000560679 FRMD5Q7Z6J6 570 aa11.44□□□□□ -0.58
TPM1-225ENST00000560679 KREMEN2Q8NCW0 462 aa11.44□□□□□ -0.58
TPM1-225ENST00000560679 CDCA3Q99618 268 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms