RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 NCOA3Q9Y6Q9 1424 aa7.51□□□□□ -1.21
AP4E1-203ENST00000560508 LRRN2O75325 713 aa7.51□□□□□ -1.21
AP4E1-203ENST00000560508 SEC31AO94979 1220 aaKnown RBP7.51□□□□□ -1.21
AP4E1-203ENST00000560508 LDHAP00338 332 aaKnown RBP7.51□□□□□ -1.21
AP4E1-203ENST00000560508 FAM47CQ5HY64 1035 aa7.51□□□□□ -1.21
AP4E1-203ENST00000560508 STOX1Q6ZVD7 989 aa7.51□□□□□ -1.21
AP4E1-203ENST00000560508 EPB41L5Q9HCM4 733 aa7.51□□□□□ -1.21
AP4E1-203ENST00000560508 GJB4Q9NTQ9 266 aa7.51□□□□□ -1.21
AP4E1-203ENST00000560508 ZNF148Q9UQR1 794 aa7.51□□□□□ -1.21
AP4E1-203ENST00000560508 SPATA31A1Q5TZJ5 1347 aa7.51□□□□□ -1.21
AP4E1-203ENST00000560508 UBR1Q8IWV7 1749 aa7.51□□□□□ -1.21
AP4E1-203ENST00000560508 AFDNP55196 1824 aaKnown RBP7.51□□□□□ -1.21
AP4E1-203ENST00000560508 MTMR1Q13613 665 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 SCARF1Q14162 830 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 SGO2Q562F6 1265 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 SPOUT1Q5T280 376 aaKnown RBP7.5□□□□□ -1.21
AP4E1-203ENST00000560508 RSPH3Q86UC2 560 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 SESTD1Q86VW0 696 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 LMNTD2Q8IXW0 634 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 FAM193BQ96PV7 902 aaPredicted RBP7.5□□□□□ -1.21
AP4E1-203ENST00000560508 AP5M1Q9H0R1 490 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 OSBPL5Q9H0X9 879 aaPredicted RBP7.5□□□□□ -1.21
AP4E1-203ENST00000560508 SNX25Q9H3E2 840 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 TMEM260Q9NX78 707 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 GDAQ9Y2T3 454 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 CCDC160A6NGH7 325 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 ECEL1O95672 775 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 PPP2R5DQ14738 602 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 GPR162Q16538 588 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 ALS2CLQ60I27 953 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 EEF2KMTQ96G04 330 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.5□□□□□ -1.21
AP4E1-203ENST00000560508 DAAM1Q9Y4D1 1078 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 ATP8B3O60423 1300 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 H7C0C1 242 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 HEXIM1O94992 359 aaKnown RBP7.5□□□□□ -1.21
AP4E1-203ENST00000560508 KRT1P04264 644 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 ATP1A3P13637 1013 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 ATP5OP48047 213 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 MAP7Q14244 749 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 SBK1Q52WX2 424 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 MON2Q7Z3U7 1717 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 WHAMMQ8TF30 809 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 DDX23Q9BUQ8 820 aaKnown RBP7.5□□□□□ -1.21
AP4E1-203ENST00000560508 PIM2Q9P1W9 311 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 JCADQ9P266 1359 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 USP17L10C9JJH3 530 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 FTCDO95954 541 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 IFNB1P01574 187 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 MXI1P50539 228 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 NAA35Q5VZE5 725 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 METTL23Q86XA0 190 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 ANKRD13CQ8N6S4 541 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 NLRP7Q8WX94 980 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 ATP6V0A4Q9HBG4 840 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 KLHL14Q9P2G3 628 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 KDM6AO15550 1401 aaPredicted RBP7.5□□□□□ -1.21
AP4E1-203ENST00000560508 C21orf2O43822 256 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 ATP1A2P50993 1020 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 TSNAXIP1Q2TAA8 658 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 SHC4Q6S5L8 630 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 ZBTB33Q86T24 672 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 APOBEC3FQ8IUX4 373 aaKnown RBP7.5□□□□□ -1.21
AP4E1-203ENST00000560508 CTAGE3PQ8IX95 158 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 NSUN4Q96CB9 384 aaKnown RBP7.5□□□□□ -1.21
AP4E1-203ENST00000560508 RILPQ96NA2 401 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 IPO11Q9UI26 975 aaKnown RBP7.5□□□□□ -1.21
AP4E1-203ENST00000560508 FBXO2Q9UK22 296 aaPredicted RBP7.5□□□□□ -1.21
AP4E1-203ENST00000560508 LPXNO60711 386 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 CAMTA2O94983 1202 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 IRX5P78411 483 aaPredicted RBP7.5□□□□□ -1.21
AP4E1-203ENST00000560508 VPS72Q15906 364 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 DNAJC24Q6P3W2 148 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 RHOT2Q8IXI1 618 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 PHF20Q9BVI0 1012 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 RPF1Q9H9Y2 349 aaKnown RBP7.5□□□□□ -1.21
AP4E1-203ENST00000560508 TTLL3Q9Y4R7 772 aa7.5□□□□□ -1.21
AP4E1-203ENST00000560508 ZNF233A6NK53 670 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 USP11P51784 963 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 MYO1EQ12965 1108 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 CUL1Q13616 776 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 SF3B3Q15393 1217 aaKnown RBP7.49□□□□□ -1.21
AP4E1-203ENST00000560508 C12orf60Q5U649 245 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 BANK1Q8NDB2 785 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 KIAA1586Q9HCI6 787 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 BCAP29Q9UHQ4 241 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 ANAPC5Q9UJX4 755 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 PNMA3Q9UL41 463 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 GLE1Q53GS7 698 aaKnown RBP7.49□□□□□ -1.21
AP4E1-203ENST00000560508 PDXDC2PQ6P474 469 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 IGDCC4Q8TDY8 1250 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 GJD4Q96KN9 370 aaPredicted RBP7.49□□□□□ -1.21
AP4E1-203ENST00000560508 CRAMP1Q96RY5 1269 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 TBC1D22BQ9NU19 505 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 SEL1LQ9UBV2 794 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 MCF2LO15068 1137 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 OATP04181 439 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 SRGAP2BP0DMP2 458 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 VPS41P49754 854 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 BARGINQ6ZT62 677 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms