RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 COL6A1P12109 1028 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 RAG1P15918 1043 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 UBA1P22314 1058 aaKnown RBP9.11□□□□□ -0.95
LRRC28-219ENST00000560483 CST5P28325 142 aaPredicted RBP9.11□□□□□ -0.95
LRRC28-219ENST00000560483 EVCP57679 992 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 MDM2Q00987 491 aaPredicted RBP9.11□□□□□ -0.95
LRRC28-219ENST00000560483 GHRHRQ02643 423 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 TLE2Q04725 743 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 ITGA7Q13683 1181 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 NEDD9Q14511 834 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 HIC1Q14526 733 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 NTRK3Q16288 839 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 PKN1Q16512 942 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 DGKDQ16760 1214 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 UTP14CQ5TAP6 766 aaKnown RBP9.11□□□□□ -0.95
LRRC28-219ENST00000560483 XRRA1Q6P2D8 792 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 PPP1R13LQ8WUF5 828 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 HLA-CQ95604 372 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 GTF3C6Q969F1 213 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 AIFM3Q96NN9 605 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 UIMC1Q96RL1 719 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 SDF4Q9BRK5 362 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 ALG1Q9BT22 464 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 ALDH8A1Q9H2A2 487 aaPredicted RBP9.11□□□□□ -0.95
LRRC28-219ENST00000560483 KCNJ14Q9UNX9 436 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 CEP290O15078 2479 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 DOCK5Q9H7D0 1870 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 ELP1O95163 1332 aa9.1□□□□□ -0.95
LRRC28-219ENST00000560483 CCDC194A0A1B0GVG4 234 aa9.1□□□□□ -0.95
LRRC28-219ENST00000560483 ARVCFO00192 962 aa9.1□□□□□ -0.95
LRRC28-219ENST00000560483 TERTO14746 1132 aaKnown RBP9.1□□□□□ -0.95
LRRC28-219ENST00000560483 KPNA6O60684 536 aa9.1□□□□□ -0.95
LRRC28-219ENST00000560483 LARGE1O95461 756 aa9.1□□□□□ -0.95
LRRC28-219ENST00000560483 MMP3P08254 477 aa9.1□□□□□ -0.95
LRRC28-219ENST00000560483 ZNF286BP0CG31 522 aa9.1□□□□□ -0.95
LRRC28-219ENST00000560483 TGFB3P10600 412 aa9.1□□□□□ -0.95
LRRC28-219ENST00000560483 MRPS9P82933 396 aaKnown RBP9.1□□□□□ -0.95
LRRC28-219ENST00000560483 ARHGAP4P98171 946 aa9.1□□□□□ -0.95
LRRC28-219ENST00000560483 CELF3Q5SZQ8 465 aaKnown RBP9.1□□□□□ -0.95
LRRC28-219ENST00000560483 MCTP2Q6DN12 878 aa9.1□□□□□ -0.95
LRRC28-219ENST00000560483 C7orf31Q8N865 590 aa9.1□□□□□ -0.95
LRRC28-219ENST00000560483 GIMAP8Q8ND71 665 aaPredicted RBP9.1□□□□□ -0.95
LRRC28-219ENST00000560483 ZSCAN31Q96LW9 406 aaPredicted RBP9.1□□□□□ -0.95
LRRC28-219ENST00000560483 ZMYND12Q9H0C1 365 aa9.1□□□□□ -0.95
LRRC28-219ENST00000560483 SH3GLB2Q9NR46 395 aa9.1□□□□□ -0.95
LRRC28-219ENST00000560483 PCDHA4Q9UN74 947 aa9.1□□□□□ -0.95
LRRC28-219ENST00000560483 ESYT2A0FGR8 921 aa9.09□□□□□ -0.95
LRRC28-219ENST00000560483 JAK2O60674 1132 aa9.09□□□□□ -0.95
LRRC28-219ENST00000560483 LORP23490 312 aaPredicted RBP9.09□□□□□ -0.95
LRRC28-219ENST00000560483 RBM25P49756 843 aaKnown RBP9.09□□□□□ -0.95
LRRC28-219ENST00000560483 SKOR1P84550 965 aa9.09□□□□□ -0.95
LRRC28-219ENST00000560483 PURAQ00577 322 aaKnown RBP9.09□□□□□ -0.95
LRRC28-219ENST00000560483 ARHGAP1Q07960 439 aa9.09□□□□□ -0.95
LRRC28-219ENST00000560483 SAFBQ15424 915 aaKnown RBP eCLIP9.09□□□□□ -0.95
LRRC28-219ENST00000560483 MSS51Q4VC12 460 aa9.09□□□□□ -0.95
LRRC28-219ENST00000560483 CEP55Q53EZ4 464 aa9.09□□□□□ -0.95
LRRC28-219ENST00000560483 CCDC62Q6P9F0 684 aa9.09□□□□□ -0.95
LRRC28-219ENST00000560483 PLA2G4DQ86XP0 818 aa9.09□□□□□ -0.95
LRRC28-219ENST00000560483 BLIDQ8IZY5 108 aa9.09□□□□□ -0.95
LRRC28-219ENST00000560483 PPTC7Q8NI37 304 aa9.09□□□□□ -0.95
LRRC28-219ENST00000560483 GLG1Q92896 1179 aa9.09□□□□□ -0.95
LRRC28-219ENST00000560483 GPRASP2Q96D09 838 aa9.09□□□□□ -0.95
LRRC28-219ENST00000560483 MXRA8Q9BRK3 442 aa9.09□□□□□ -0.95
LRRC28-219ENST00000560483 KATNAL1Q9BW62 490 aa9.09□□□□□ -0.95
LRRC28-219ENST00000560483 PPP1R12CQ9BZL4 782 aa9.09□□□□□ -0.95
LRRC28-219ENST00000560483 UBE2OQ9C0C9 1292 aaKnown RBP9.09□□□□□ -0.95
LRRC28-219ENST00000560483 JADE2Q9NQC1 790 aa9.09□□□□□ -0.95
LRRC28-219ENST00000560483 SH2B1Q9NRF2 756 aaPredicted RBP9.09□□□□□ -0.95
LRRC28-219ENST00000560483 SAMM50Q9Y512 469 aa9.09□□□□□ -0.95
LRRC28-219ENST00000560483 KAT6AQ92794 2004 aa9.09□□□□□ -0.95
LRRC28-219ENST00000560483 STK36Q9NRP7 1315 aa9.08□□□□□ -0.96
LRRC28-219ENST00000560483 A6NJR5 290 aa9.08□□□□□ -0.96
LRRC28-219ENST00000560483 SPATA31C2B4DYI2 1134 aa9.08□□□□□ -0.96
LRRC28-219ENST00000560483 BACH1O14867 736 aa9.08□□□□□ -0.96
LRRC28-219ENST00000560483 ITGB5P18084 799 aa9.08□□□□□ -0.96
LRRC28-219ENST00000560483 KRT2P35908 639 aa9.08□□□□□ -0.96
LRRC28-219ENST00000560483 SREBF1P36956 1147 aa9.08□□□□□ -0.96
LRRC28-219ENST00000560483 MAGEA10P43363 369 aaPredicted RBP9.08□□□□□ -0.96
LRRC28-219ENST00000560483 SP2Q02086 613 aa9.08□□□□□ -0.96
LRRC28-219ENST00000560483 GUCY1B3Q02153 619 aa9.08□□□□□ -0.96
LRRC28-219ENST00000560483 NONOQ15233 471 aaKnown RBP eCLIP9.08□□□□□ -0.96
LRRC28-219ENST00000560483 KIAA0753Q2KHM9 967 aa9.08□□□□□ -0.96
LRRC28-219ENST00000560483 NBPF20Q3BBV1 942 aa9.08□□□□□ -0.96
LRRC28-219ENST00000560483 HSDL1Q3SXM5 330 aa9.08□□□□□ -0.96
LRRC28-219ENST00000560483 PRR16Q569H4 304 aa9.08□□□□□ -0.96
LRRC28-219ENST00000560483 MYSM1Q5VVJ2 828 aa9.08□□□□□ -0.96
LRRC28-219ENST00000560483 CCSAPQ6IQ19 270 aaPredicted RBP9.08□□□□□ -0.96
LRRC28-219ENST00000560483 METTL7BQ6UX53 244 aa9.08□□□□□ -0.96
LRRC28-219ENST00000560483 TRMT1LQ7Z2T5 733 aaKnown RBP9.08□□□□□ -0.96
LRRC28-219ENST00000560483 SNIP1Q8TAD8 396 aaKnown RBP9.08□□□□□ -0.96
LRRC28-219ENST00000560483 INPP4AQ96PE3 977 aaPredicted RBP9.08□□□□□ -0.96
LRRC28-219ENST00000560483 ZNF577Q9BSK1 485 aa9.08□□□□□ -0.96
LRRC28-219ENST00000560483 AZI2Q9H6S1 392 aa9.08□□□□□ -0.96
LRRC28-219ENST00000560483 JPH1Q9HDC5 661 aaPredicted RBP9.08□□□□□ -0.96
LRRC28-219ENST00000560483 KCNH7Q9NS40 1196 aa9.08□□□□□ -0.96
LRRC28-219ENST00000560483 ZNF215Q9UL58 517 aaPredicted RBP9.08□□□□□ -0.96
LRRC28-219ENST00000560483 FRMPD4Q14CM0 1322 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 CTAGE5O15320 804 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 MAFGO15525 162 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 PPFIA4O75335 1185 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms