RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 AGO4Q9HCK5 861 aaKnown RBP17.28■□□□□ 0.36
SNRPA1-210ENST00000560383 JPH1Q9HDC5 661 aaPredicted RBP17.28■□□□□ 0.36
SNRPA1-210ENST00000560383 COL4A4P53420 1690 aaPredicted RBP17.28■□□□□ 0.36
SNRPA1-210ENST00000560383 M0R2N6 131 aa17.27■□□□□ 0.36
SNRPA1-210ENST00000560383 EDIL3O43854 480 aa17.27■□□□□ 0.36
SNRPA1-210ENST00000560383 CTDNEP1O95476 244 aa17.27■□□□□ 0.36
SNRPA1-210ENST00000560383 TCF7P36402 384 aaPredicted RBP17.27■□□□□ 0.36
SNRPA1-210ENST00000560383 NLRP5P59047 1200 aa17.27■□□□□ 0.36
SNRPA1-210ENST00000560383 TAP1Q03518 808 aa17.27■□□□□ 0.36
SNRPA1-210ENST00000560383 ITGB3BPQ13352 177 aaPredicted RBP17.27■□□□□ 0.36
SNRPA1-210ENST00000560383 ME3Q16798 604 aa17.27■□□□□ 0.36
SNRPA1-210ENST00000560383 ZNF618Q5T7W0 954 aa17.27■□□□□ 0.36
SNRPA1-210ENST00000560383 RASGRP4Q8TDF6 673 aa17.27■□□□□ 0.36
SNRPA1-210ENST00000560383 WNT8BQ93098 351 aa17.27■□□□□ 0.36
SNRPA1-210ENST00000560383 SLC9A2Q9UBY0 812 aa17.27■□□□□ 0.36
SNRPA1-210ENST00000560383 ZNF215Q9UL58 517 aaPredicted RBP17.27■□□□□ 0.36
SNRPA1-210ENST00000560383 PCDHA4Q9UN74 947 aa17.27■□□□□ 0.36
SNRPA1-210ENST00000560383 C17orf102A2RUQ5 167 aa17.26■□□□□ 0.35
SNRPA1-210ENST00000560383 TLL1O43897 1013 aa17.26■□□□□ 0.35
SNRPA1-210ENST00000560383 SMIM10L2AP0DMW4 78 aa17.26■□□□□ 0.35
SNRPA1-210ENST00000560383 SMIM10L2BP0DMW5 78 aa17.26■□□□□ 0.35
SNRPA1-210ENST00000560383 ZNF76P36508 570 aa17.26■□□□□ 0.35
SNRPA1-210ENST00000560383 ZNF200P98182 395 aaPredicted RBP17.26■□□□□ 0.35
SNRPA1-210ENST00000560383 SP4Q02446 784 aa17.26■□□□□ 0.35
SNRPA1-210ENST00000560383 TRIM50Q86XT4 487 aa17.26■□□□□ 0.35
SNRPA1-210ENST00000560383 GTF3C6Q969F1 213 aa17.26■□□□□ 0.35
SNRPA1-210ENST00000560383 AIFM3Q96NN9 605 aa17.26■□□□□ 0.35
SNRPA1-210ENST00000560383 KIF2CQ99661 725 aa17.26■□□□□ 0.35
SNRPA1-210ENST00000560383 SDF4Q9BRK5 362 aa17.26■□□□□ 0.35
SNRPA1-210ENST00000560383 RNPEPQ9H4A4 650 aa17.26■□□□□ 0.35
SNRPA1-210ENST00000560383 PKD2L1Q9P0L9 805 aa17.26■□□□□ 0.35
SNRPA1-210ENST00000560383 DHX15O43143 795 aaKnown RBP17.25■□□□□ 0.35
SNRPA1-210ENST00000560383 LGR5O75473 907 aa17.25■□□□□ 0.35
SNRPA1-210ENST00000560383 ATG7O95352 703 aa17.25■□□□□ 0.35
SNRPA1-210ENST00000560383 LARGE1O95461 756 aa17.25■□□□□ 0.35
SNRPA1-210ENST00000560383 GNAT1P11488 350 aa17.25■□□□□ 0.35
SNRPA1-210ENST00000560383 USP11P51784 963 aa17.25■□□□□ 0.35
SNRPA1-210ENST00000560383 ADAM17P78536 824 aa17.25■□□□□ 0.35
SNRPA1-210ENST00000560383 SETQ01105 290 aaPredicted RBP17.25■□□□□ 0.35
SNRPA1-210ENST00000560383 IKBKEQ14164 716 aa17.25■□□□□ 0.35
SNRPA1-210ENST00000560383 MBTPS1Q14703 1052 aa17.25■□□□□ 0.35
SNRPA1-210ENST00000560383 UTP14CQ5TAP6 766 aaKnown RBP17.25■□□□□ 0.35
SNRPA1-210ENST00000560383 PLA2G4DQ86XP0 818 aa17.25■□□□□ 0.35
SNRPA1-210ENST00000560383 PPM1EQ8WY54 764 aa17.25■□□□□ 0.35
SNRPA1-210ENST00000560383 ATP6V0A1Q93050 837 aa17.25■□□□□ 0.35
SNRPA1-210ENST00000560383 PCYT2Q99447 389 aa17.25■□□□□ 0.35
SNRPA1-210ENST00000560383 C22orf23Q9BZE7 217 aa17.25■□□□□ 0.35
SNRPA1-210ENST00000560383 SIP14410 1827 aa17.25■□□□□ 0.35
SNRPA1-210ENST00000560383 COL4A6Q14031 1691 aa17.24■□□□□ 0.35
SNRPA1-210ENST00000560383 RSPH10B2B2RC85 870 aa17.24■□□□□ 0.35
SNRPA1-210ENST00000560383 IPO5O00410 1097 aaKnown RBP17.24■□□□□ 0.35
SNRPA1-210ENST00000560383 GTPBP6O43824 516 aaPredicted RBP17.24■□□□□ 0.35
SNRPA1-210ENST00000560383 GJB5O95377 273 aa17.24■□□□□ 0.35
SNRPA1-210ENST00000560383 RSPH10BP0C881 870 aa17.24■□□□□ 0.35
SNRPA1-210ENST00000560383 FDPSP14324 419 aaKnown RBP17.24■□□□□ 0.35
SNRPA1-210ENST00000560383 RBM25P49756 843 aaKnown RBP17.24■□□□□ 0.35
SNRPA1-210ENST00000560383 ACTR2P61160 394 aa17.24■□□□□ 0.35
SNRPA1-210ENST00000560383 DEFB103AP81534 67 aa17.24■□□□□ 0.35
SNRPA1-210ENST00000560383 MKRN4PQ13434 485 aaPredicted RBP17.24■□□□□ 0.35
SNRPA1-210ENST00000560383 BLIDQ8IZY5 108 aa17.24■□□□□ 0.35
SNRPA1-210ENST00000560383 NECAB1Q8N987 351 aa17.24■□□□□ 0.35
SNRPA1-210ENST00000560383 LENG9Q96B70 501 aa17.24■□□□□ 0.35
SNRPA1-210ENST00000560383 ASB2Q96Q27 587 aa17.24■□□□□ 0.35
SNRPA1-210ENST00000560383 PHF20Q9BVI0 1012 aa17.24■□□□□ 0.35
SNRPA1-210ENST00000560383 TSPYL2Q9H2G4 693 aaPredicted RBP17.24■□□□□ 0.35
SNRPA1-210ENST00000560383 SMARCAD1Q9H4L7 1026 aa17.24■□□□□ 0.35
SNRPA1-210ENST00000560383 PRDM6Q9NQX0 595 aa17.24■□□□□ 0.35
SNRPA1-210ENST00000560383 ERAP1Q9NZ08 941 aa17.24■□□□□ 0.35
SNRPA1-210ENST00000560383 NRCAMQ92823 1304 aa17.23■□□□□ 0.35
SNRPA1-210ENST00000560383 KAT6AQ92794 2004 aa17.23■□□□□ 0.35
SNRPA1-210ENST00000560383 IGKV6D-21A0A0A0MT36 114 aa17.23■□□□□ 0.35
SNRPA1-210ENST00000560383 ARHGEF15O94989 841 aa17.23■□□□□ 0.35
SNRPA1-210ENST00000560383 CCNE2O96020 404 aa17.23■□□□□ 0.35
SNRPA1-210ENST00000560383 THPOP40225 353 aa17.23■□□□□ 0.35
SNRPA1-210ENST00000560383 MRPS5P82675 430 aaKnown RBP17.23■□□□□ 0.35
SNRPA1-210ENST00000560383 TCTN1Q2MV58 587 aa17.23■□□□□ 0.35
SNRPA1-210ENST00000560383 PLPPR4Q7Z2D5 763 aa17.23■□□□□ 0.35
SNRPA1-210ENST00000560383 RAD9AQ99638 391 aa17.23■□□□□ 0.35
SNRPA1-210ENST00000560383 ZBED2Q9BTP6 218 aa17.23■□□□□ 0.35
SNRPA1-210ENST00000560383 ORC3Q9UBD5 711 aaPredicted RBP17.23■□□□□ 0.35
SNRPA1-210ENST00000560383 MTCH2Q9Y6C9 303 aa17.23■□□□□ 0.35
SNRPA1-210ENST00000560383 PRRC2BQ5JSZ5 2229 aaKnown RBP17.23■□□□□ 0.35
SNRPA1-210ENST00000560383 CYP3A7-CYP3A51PA0A087WV96 503 aa17.22■□□□□ 0.35
SNRPA1-210ENST00000560383 EPOPA6NHQ4 379 aa17.22■□□□□ 0.35
SNRPA1-210ENST00000560383 TREHO43280 583 aa17.22■□□□□ 0.35
SNRPA1-210ENST00000560383 XBP1P17861 261 aa17.22■□□□□ 0.35
SNRPA1-210ENST00000560383 CYP3A7P24462 503 aa17.22■□□□□ 0.35
SNRPA1-210ENST00000560383 CCDC85BQ15834 202 aaPredicted RBP17.22■□□□□ 0.35
SNRPA1-210ENST00000560383 PLEKHG4Q58EX7 1191 aa17.22■□□□□ 0.35
SNRPA1-210ENST00000560383 ABHD15Q6UXT9 468 aa17.22■□□□□ 0.35
SNRPA1-210ENST00000560383 NSUN7Q8NE18 718 aaKnown RBP17.22■□□□□ 0.35
SNRPA1-210ENST00000560383 TBCKQ8TEA7 893 aa17.22■□□□□ 0.35
SNRPA1-210ENST00000560383 WASF1Q92558 559 aa17.22■□□□□ 0.35
SNRPA1-210ENST00000560383 GLG1Q92896 1179 aa17.22■□□□□ 0.35
SNRPA1-210ENST00000560383 TBC1D22BQ9NU19 505 aa17.22■□□□□ 0.35
SNRPA1-210ENST00000560383 SETD4Q9NVD3 440 aa17.22■□□□□ 0.35
SNRPA1-210ENST00000560383 LCHNA4D1U4 455 aa17.21■□□□□ 0.35
SNRPA1-210ENST00000560383 ST3GAL1Q11201 340 aa17.21■□□□□ 0.35
SNRPA1-210ENST00000560383 PRR16Q569H4 304 aa17.21■□□□□ 0.35
SNRPA1-210ENST00000560383 MOXD1Q6UVY6 613 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms