RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 TOB2Q14106 344 aaPredicted RBP23.49■■□□□ 1.35
PSEN1-225ENST00000560005 SART3Q15020 963 aaKnown RBP23.49■■□□□ 1.35
PSEN1-225ENST00000560005 CCDC178Q5BJE1 867 aa23.49■■□□□ 1.35
PSEN1-225ENST00000560005 ADGRA3Q8IWK6 1321 aa23.49■■□□□ 1.35
PSEN1-225ENST00000560005 CFAP54Q96N23 3096 aa23.48■■□□□ 1.35
PSEN1-225ENST00000560005 NOP56O00567 594 aaKnown RBP23.48■■□□□ 1.35
PSEN1-225ENST00000560005 PPP1R11O60927 126 aaPredicted RBP23.48■■□□□ 1.35
PSEN1-225ENST00000560005 NUCB2P80303 420 aa23.48■■□□□ 1.35
PSEN1-225ENST00000560005 IER5LQ5T953 404 aa23.48■■□□□ 1.35
PSEN1-225ENST00000560005 TMTC2Q8N394 836 aa23.48■■□□□ 1.35
PSEN1-225ENST00000560005 ENAHQ8N8S7 591 aaPredicted RBP23.48■■□□□ 1.35
PSEN1-225ENST00000560005 ZNF274Q96GC6 653 aaPredicted RBP23.48■■□□□ 1.35
PSEN1-225ENST00000560005 ZSCAN10Q96SZ4 725 aaPredicted RBP23.48■■□□□ 1.35
PSEN1-225ENST00000560005 CD207Q9UJ71 328 aa23.48■■□□□ 1.35
PSEN1-225ENST00000560005 RWDD3Q9Y3V2 267 aa23.48■■□□□ 1.35
PSEN1-225ENST00000560005 B4E1Z4 1266 aa23.47■■□□□ 1.35
PSEN1-225ENST00000560005 GNAT1P11488 350 aa23.47■■□□□ 1.35
PSEN1-225ENST00000560005 CCND2P30279 289 aa23.47■■□□□ 1.35
PSEN1-225ENST00000560005 EVCP57679 992 aa23.47■■□□□ 1.35
PSEN1-225ENST00000560005 MAP3K20Q9NYL2 800 aaKnown RBP23.47■■□□□ 1.35
PSEN1-225ENST00000560005 TPCN1Q9ULQ1 816 aa23.47■■□□□ 1.35
PSEN1-225ENST00000560005 PCDHA1Q9Y5I3 950 aa23.47■■□□□ 1.35
PSEN1-225ENST00000560005 ZDBF2Q9HCK1 2354 aa23.47■■□□□ 1.35
PSEN1-225ENST00000560005 DDIT3P35638 169 aa23.46■■□□□ 1.35
PSEN1-225ENST00000560005 PTPN5P54829 565 aa23.46■■□□□ 1.35
PSEN1-225ENST00000560005 FAM26DQ5JW98 314 aa23.46■■□□□ 1.35
PSEN1-225ENST00000560005 BMP8AQ7Z5Y6 402 aa23.46■■□□□ 1.35
PSEN1-225ENST00000560005 TRIM50Q86XT4 487 aa23.46■■□□□ 1.35
PSEN1-225ENST00000560005 STAG2Q8N3U4 1231 aa23.46■■□□□ 1.35
PSEN1-225ENST00000560005 CLP1Q92989 425 aaKnown RBP23.46■■□□□ 1.35
PSEN1-225ENST00000560005 BRF1Q92994 677 aa23.46■■□□□ 1.35
PSEN1-225ENST00000560005 PBXIP1Q96AQ6 731 aa23.46■■□□□ 1.35
PSEN1-225ENST00000560005 RC3H2Q9HBD1 1191 aaKnown RBP23.46■■□□□ 1.35
PSEN1-225ENST00000560005 ERICH2A1L162 156 aa23.45■■□□□ 1.34
PSEN1-225ENST00000560005 TMEM221A6NGB7 291 aa23.45■■□□□ 1.34
PSEN1-225ENST00000560005 M0R296 226 aa23.45■■□□□ 1.34
PSEN1-225ENST00000560005 MMP1P03956 469 aa23.45■■□□□ 1.34
PSEN1-225ENST00000560005 GHRP10912 638 aa23.45■■□□□ 1.34
PSEN1-225ENST00000560005 NDUFV1P49821 464 aa23.45■■□□□ 1.34
PSEN1-225ENST00000560005 ARHGAP4P98171 946 aa23.45■■□□□ 1.34
PSEN1-225ENST00000560005 ME3Q16798 604 aa23.45■■□□□ 1.34
PSEN1-225ENST00000560005 TRIM67Q6ZTA4 783 aa23.45■■□□□ 1.34
PSEN1-225ENST00000560005 FCHSD1Q86WN1 690 aa23.45■■□□□ 1.34
PSEN1-225ENST00000560005 TCEANC2Q96MN5 208 aa23.45■■□□□ 1.34
PSEN1-225ENST00000560005 ALG13Q9NP73 1137 aaKnown RBP23.45■■□□□ 1.34
PSEN1-225ENST00000560005 CHRNA1P02708 482 aa23.44■■□□□ 1.34
PSEN1-225ENST00000560005 ADAM15Q13444 863 aa23.44■■□□□ 1.34
PSEN1-225ENST00000560005 BTG3Q14201 252 aaPredicted RBP23.44■■□□□ 1.34
PSEN1-225ENST00000560005 LMBR1Q8WVP7 490 aa23.44■■□□□ 1.34
PSEN1-225ENST00000560005 ZSWIM5Q9P217 1185 aa23.44■■□□□ 1.34
PSEN1-225ENST00000560005 ZBTB5O15062 677 aa23.43■■□□□ 1.34
PSEN1-225ENST00000560005 PFKFB2O60825 505 aa23.43■■□□□ 1.34
PSEN1-225ENST00000560005 LIFRP42702 1097 aa23.43■■□□□ 1.34
PSEN1-225ENST00000560005 ADAM17P78536 824 aa23.43■■□□□ 1.34
PSEN1-225ENST00000560005 CAMK1Q14012 370 aa23.43■■□□□ 1.34
PSEN1-225ENST00000560005 METTL7BQ6UX53 244 aa23.43■■□□□ 1.34
PSEN1-225ENST00000560005 CYFIP1Q7L576 1253 aa23.43■■□□□ 1.34
PSEN1-225ENST00000560005 SUGP1Q8IWZ8 645 aaKnown RBP23.43■■□□□ 1.34
PSEN1-225ENST00000560005 SAMD3Q8N6K7 520 aa23.43■■□□□ 1.34
PSEN1-225ENST00000560005 MTMR8Q96EF0 704 aa23.43■■□□□ 1.34
PSEN1-225ENST00000560005 MSLNLQ96KJ4 702 aa23.43■■□□□ 1.34
PSEN1-225ENST00000560005 GPR20Q99678 358 aa23.43■■□□□ 1.34
PSEN1-225ENST00000560005 LLPHQ9BRT6 129 aaKnown RBP23.43■■□□□ 1.34
PSEN1-225ENST00000560005 FOXD4L1Q9NU39 408 aa23.43■■□□□ 1.34
PSEN1-225ENST00000560005 ZNF215Q9UL58 517 aaPredicted RBP23.43■■□□□ 1.34
PSEN1-225ENST00000560005 SMC3Q9UQE7 1217 aa23.43■■□□□ 1.34
PSEN1-225ENST00000560005 ZFHX2Q9C0A1 2572 aaPredicted RBP23.43■■□□□ 1.34
PSEN1-225ENST00000560005 KLRF2D3W0D1 207 aa23.42■■□□□ 1.34
PSEN1-225ENST00000560005 GCOM1H8Y6P7 765 aaPredicted RBP23.42■■□□□ 1.34
PSEN1-225ENST00000560005 POLR2MP0CAP2 368 aa23.42■■□□□ 1.34
PSEN1-225ENST00000560005 TCF15Q12870 199 aa23.42■■□□□ 1.34
PSEN1-225ENST00000560005 GNPTABQ3T906 1256 aa23.42■■□□□ 1.34
PSEN1-225ENST00000560005 UTP14CQ5TAP6 766 aaKnown RBP23.42■■□□□ 1.34
PSEN1-225ENST00000560005 HOMER1Q86YM7 354 aa23.42■■□□□ 1.34
PSEN1-225ENST00000560005 PLVAPQ9BX97 442 aa23.42■■□□□ 1.34
PSEN1-225ENST00000560005 EHMT1Q9H9B1 1298 aa23.42■■□□□ 1.34
PSEN1-225ENST00000560005 PLAGL2Q9UPG8 496 aa23.42■■□□□ 1.34
PSEN1-225ENST00000560005 TELO2Q9Y4R8 837 aa23.42■■□□□ 1.34
PSEN1-225ENST00000560005 DOCK5Q9H7D0 1870 aa23.41■■□□□ 1.34
PSEN1-225ENST00000560005 CACNA1HO95180 2353 aa23.41■■□□□ 1.34
PSEN1-225ENST00000560005 ENPP3O14638 875 aa23.41■■□□□ 1.34
PSEN1-225ENST00000560005 IFIT3O14879 490 aaKnown RBP23.41■■□□□ 1.34
PSEN1-225ENST00000560005 EYA4O95677 639 aa23.41■■□□□ 1.34
PSEN1-225ENST00000560005 ANTXR2P58335 489 aa23.41■■□□□ 1.34
PSEN1-225ENST00000560005 NEDD9Q14511 834 aa23.41■■□□□ 1.34
PSEN1-225ENST00000560005 LPIN1Q14693 890 aa23.41■■□□□ 1.34
PSEN1-225ENST00000560005 PKN1Q16512 942 aa23.41■■□□□ 1.34
PSEN1-225ENST00000560005 SYNE3Q6ZMZ3 975 aa23.41■■□□□ 1.34
PSEN1-225ENST00000560005 ZNF689Q96CS4 500 aaPredicted RBP23.41■■□□□ 1.34
PSEN1-225ENST00000560005 PRRX2Q99811 253 aa23.41■■□□□ 1.34
PSEN1-225ENST00000560005 UBAC1Q9BSL1 405 aa23.41■■□□□ 1.34
PSEN1-225ENST00000560005 LRRC2Q9BYS8 371 aa23.41■■□□□ 1.34
PSEN1-225ENST00000560005 CLEC1BQ9P126 229 aa23.41■■□□□ 1.34
PSEN1-225ENST00000560005 SH2B2O14492 632 aaPredicted RBP23.4■■□□□ 1.34
PSEN1-225ENST00000560005 DNAJB1P25685 340 aa23.4■■□□□ 1.34
PSEN1-225ENST00000560005 ICAM3P32942 547 aa23.4■■□□□ 1.34
PSEN1-225ENST00000560005 MRPS9P82933 396 aaKnown RBP23.4■■□□□ 1.34
PSEN1-225ENST00000560005 ZXDAP98168 799 aa23.4■■□□□ 1.34
PSEN1-225ENST00000560005 SP4Q02446 784 aa23.4■■□□□ 1.34
PSEN1-225ENST00000560005 SEMA3FQ13275 785 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms