RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 LRWD1Q9UFC0 647 aa10.56□□□□□ -0.72
HERC1-206ENST00000559996 WDR81Q562E7 1941 aa10.55□□□□□ -0.72
HERC1-206ENST00000559996 A0A087WWV3 80 aa10.55□□□□□ -0.72
HERC1-206ENST00000559996 ZBTB39O15060 712 aa10.55□□□□□ -0.72
HERC1-206ENST00000559996 NR1I2O75469 434 aa10.55□□□□□ -0.72
HERC1-206ENST00000559996 HOXD8P13378 290 aaPredicted RBP10.55□□□□□ -0.72
HERC1-206ENST00000559996 PFKFB1P16118 471 aa10.55□□□□□ -0.72
HERC1-206ENST00000559996 RPA1P27694 616 aa10.55□□□□□ -0.72
HERC1-206ENST00000559996 GRK4P32298 578 aa10.55□□□□□ -0.72
HERC1-206ENST00000559996 ACTR2P61160 394 aa10.55□□□□□ -0.72
HERC1-206ENST00000559996 TNFAIP2Q03169 654 aa10.55□□□□□ -0.72
HERC1-206ENST00000559996 ARHGEF6Q15052 776 aa10.55□□□□□ -0.72
HERC1-206ENST00000559996 MFSD14CQ5VZR4 134 aa10.55□□□□□ -0.72
HERC1-206ENST00000559996 KCNK18Q7Z418 384 aa10.55□□□□□ -0.72
HERC1-206ENST00000559996 RAET1EQ8TD07 263 aa10.55□□□□□ -0.72
HERC1-206ENST00000559996 LENG1Q96BZ8 264 aaPredicted RBP10.55□□□□□ -0.72
HERC1-206ENST00000559996 DYDC2Q96IM9 177 aa10.55□□□□□ -0.72
HERC1-206ENST00000559996 GPR20Q99678 358 aa10.55□□□□□ -0.72
HERC1-206ENST00000559996 MTRQ99707 1265 aa10.55□□□□□ -0.72
HERC1-206ENST00000559996 EIF2AK1Q9BQI3 630 aaKnown RBP10.55□□□□□ -0.72
HERC1-206ENST00000559996 POLR3CQ9BUI4 534 aaPredicted RBP10.55□□□□□ -0.72
HERC1-206ENST00000559996 PANK2Q9BZ23 570 aa10.55□□□□□ -0.72
HERC1-206ENST00000559996 DISC1Q9NRI5 854 aa10.55□□□□□ -0.72
HERC1-206ENST00000559996 BLOC1S4Q9NUP1 217 aa10.55□□□□□ -0.72
HERC1-206ENST00000559996 ZHX1Q9UKY1 873 aaPredicted RBP10.55□□□□□ -0.72
HERC1-206ENST00000559996 Q9Y3F1 56 aa10.55□□□□□ -0.72
HERC1-206ENST00000559996 NKRFO15226 690 aaKnown RBP eCLIP10.54□□□□□ -0.72
HERC1-206ENST00000559996 SEPT4O43236 478 aa10.54□□□□□ -0.72
HERC1-206ENST00000559996 ZNF862O60290 1169 aa10.54□□□□□ -0.72
HERC1-206ENST00000559996 LGR5O75473 907 aa10.54□□□□□ -0.72
HERC1-206ENST00000559996 HMGCRP04035 888 aa10.54□□□□□ -0.72
HERC1-206ENST00000559996 CENPFP49454 3210 aa10.54□□□□□ -0.72
HERC1-206ENST00000559996 CTCFP49711 727 aaPredicted RBP10.54□□□□□ -0.72
HERC1-206ENST00000559996 PSMC6P62333 389 aa10.54□□□□□ -0.72
HERC1-206ENST00000559996 MDM2Q00987 491 aaPredicted RBP10.54□□□□□ -0.72
HERC1-206ENST00000559996 KRT76Q01546 638 aa10.54□□□□□ -0.72
HERC1-206ENST00000559996 KARSQ15046 597 aaKnown RBP10.54□□□□□ -0.72
HERC1-206ENST00000559996 UGCGQ16739 394 aa10.54□□□□□ -0.72
HERC1-206ENST00000559996 CSPP1Q1MSJ5 1256 aa10.54□□□□□ -0.72
HERC1-206ENST00000559996 TPRNQ4KMQ1 711 aa10.54□□□□□ -0.72
HERC1-206ENST00000559996 TMEM119Q4V9L6 283 aa10.54□□□□□ -0.72
HERC1-206ENST00000559996 NCAPH2Q6IBW4 605 aa10.54□□□□□ -0.72
HERC1-206ENST00000559996 MIER3Q7Z3K6 550 aa10.54□□□□□ -0.72
HERC1-206ENST00000559996 CCDC60Q8IWA6 550 aaPredicted RBP10.54□□□□□ -0.72
HERC1-206ENST00000559996 DHX37Q8IY37 1157 aaKnown RBP10.54□□□□□ -0.72
HERC1-206ENST00000559996 FSIP1Q8NA03 581 aa10.54□□□□□ -0.72
HERC1-206ENST00000559996 GIMAP8Q8ND71 665 aaPredicted RBP10.54□□□□□ -0.72
HERC1-206ENST00000559996 SDF4Q9BRK5 362 aa10.54□□□□□ -0.72
HERC1-206ENST00000559996 JPH1Q9HDC5 661 aaPredicted RBP10.54□□□□□ -0.72
HERC1-206ENST00000559996 FAM184BQ9ULE4 1060 aa10.54□□□□□ -0.72
HERC1-206ENST00000559996 PCDHA10Q9Y5I2 948 aa10.54□□□□□ -0.72
HERC1-206ENST00000559996 MAFBQ9Y5Q3 323 aaPredicted RBP10.54□□□□□ -0.72
HERC1-206ENST00000559996 MYADML2A6NDP7 307 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 A6NJR5 290 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 DYNC1LI2O43237 492 aaPredicted RBP10.53□□□□□ -0.72
HERC1-206ENST00000559996 CHMP2AO43633 222 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 ACTN4O43707 911 aaKnown RBP10.53□□□□□ -0.72
HERC1-206ENST00000559996 MARCH6O60337 910 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 DUSP11O75319 330 aaKnown RBP10.53□□□□□ -0.72
HERC1-206ENST00000559996 ZNF202O95125 648 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 LYPLA2O95372 231 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 GH1P01241 217 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 INHAP05111 366 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 P4HBP07237 508 aaKnown RBP10.53□□□□□ -0.72
HERC1-206ENST00000559996 SUPT20HL2P0C7V6 817 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 AKR1A1P14550 325 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 HOXB1P14653 301 aaPredicted RBP10.53□□□□□ -0.72
HERC1-206ENST00000559996 SFNP31947 248 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 LAMC2Q13753 1193 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 CTTNQ14247 550 aaKnown RBP10.53□□□□□ -0.72
HERC1-206ENST00000559996 TMEM266Q2M3C6 531 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 LONRF3Q496Y0 759 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 CCSAPQ6IQ19 270 aaPredicted RBP10.53□□□□□ -0.72
HERC1-206ENST00000559996 PDXDC2PQ6P474 469 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 SH3RF1Q7Z6J0 888 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 CTU1Q7Z7A3 348 aaKnown RBP10.53□□□□□ -0.72
HERC1-206ENST00000559996 CABP7Q86V35 215 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 SMAP1Q8IYB5 467 aaPredicted RBP10.53□□□□□ -0.72
HERC1-206ENST00000559996 RDM1Q8NG50 284 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 PPTC7Q8NI37 304 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 AFAP1L1Q8TED9 768 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 SH3TC2Q8TF17 1288 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 SEPT1Q8WYJ6 367 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 MRPS27Q92552 414 aaKnown RBP10.53□□□□□ -0.72
HERC1-206ENST00000559996 CEP89Q96ST8 783 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 PLIN2Q99541 437 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 C16orf70Q9BSU1 422 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 UPF3AQ9H1J1 476 aaKnown RBP10.53□□□□□ -0.72
HERC1-206ENST00000559996 MLXIPQ9HAP2 919 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 KCNH3Q9ULD8 1083 aa10.53□□□□□ -0.72
HERC1-206ENST00000559996 WDR64B1ANS9 1081 aa10.52□□□□□ -0.73
HERC1-206ENST00000559996 POLR2DO15514 142 aaKnown RBP10.52□□□□□ -0.73
HERC1-206ENST00000559996 SLC26A4O43511 780 aa10.52□□□□□ -0.73
HERC1-206ENST00000559996 ADAMTS4O75173 837 aa10.52□□□□□ -0.73
HERC1-206ENST00000559996 PLCG1P19174 1290 aa10.52□□□□□ -0.73
HERC1-206ENST00000559996 MUTP22033 750 aa10.52□□□□□ -0.73
HERC1-206ENST00000559996 UBA7P41226 1012 aa10.52□□□□□ -0.73
HERC1-206ENST00000559996 JAK3P52333 1124 aa10.52□□□□□ -0.73
HERC1-206ENST00000559996 GJA9P57773 515 aa10.52□□□□□ -0.73
HERC1-206ENST00000559996 MTFR1Q15390 333 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms