RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 GCOM1H8Y6P7 765 aaPredicted RBP19.79■□□□□ 0.76
SNX1-208ENST00000559844 TNPO2O14787 897 aaKnown RBP19.79■□□□□ 0.76
SNX1-208ENST00000559844 STX10O60499 249 aa19.79■□□□□ 0.76
SNX1-208ENST00000559844 TUBB4AP04350 444 aa19.79■□□□□ 0.76
SNX1-208ENST00000559844 POLR2MP0CAP2 368 aa19.79■□□□□ 0.76
SNX1-208ENST00000559844 CTGFP29279 349 aa19.79■□□□□ 0.76
SNX1-208ENST00000559844 RPS6P62753 249 aaKnown RBP19.79■□□□□ 0.76
SNX1-208ENST00000559844 BAATQ14032 418 aaPredicted RBP19.79■□□□□ 0.76
SNX1-208ENST00000559844 KIF22Q14807 665 aa19.79■□□□□ 0.76
SNX1-208ENST00000559844 PRR16Q569H4 304 aa19.79■□□□□ 0.76
SNX1-208ENST00000559844 TTI2Q6NXR4 508 aa19.79■□□□□ 0.76
SNX1-208ENST00000559844 FAM114A1Q8IWE2 563 aa19.79■□□□□ 0.76
SNX1-208ENST00000559844 TC2NQ8N9U0 490 aa19.79■□□□□ 0.76
SNX1-208ENST00000559844 BAG1Q99933 345 aaPredicted RBP19.79■□□□□ 0.76
SNX1-208ENST00000559844 BMP2KQ9NSY1 1161 aaPredicted RBP19.79■□□□□ 0.76
SNX1-208ENST00000559844 PFASO15067 1338 aa19.79■□□□□ 0.76
SNX1-208ENST00000559844 ZNF236Q9UL36 1845 aa19.78■□□□□ 0.76
SNX1-208ENST00000559844 TRIM49BA6NDI0 452 aa19.78■□□□□ 0.76
SNX1-208ENST00000559844 COBLO75128 1261 aa19.78■□□□□ 0.76
SNX1-208ENST00000559844 TPM1P09493 284 aa19.78■□□□□ 0.76
SNX1-208ENST00000559844 PSMC4P43686 418 aa19.78■□□□□ 0.76
SNX1-208ENST00000559844 HSD17B4P51659 736 aa19.78■□□□□ 0.76
SNX1-208ENST00000559844 FCGRTP55899 365 aa19.78■□□□□ 0.76
SNX1-208ENST00000559844 STK4Q13043 487 aa19.78■□□□□ 0.76
SNX1-208ENST00000559844 PTPN21Q16825 1174 aa19.78■□□□□ 0.76
SNX1-208ENST00000559844 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.78■□□□□ 0.76
SNX1-208ENST00000559844 ZNF296Q8WUU4 475 aaPredicted RBP19.78■□□□□ 0.76
SNX1-208ENST00000559844 TRMT1Q9NXH9 659 aaKnown RBP19.78■□□□□ 0.76
SNX1-208ENST00000559844 CASP8AP2Q9UKL3 1982 aa19.78■□□□□ 0.76
SNX1-208ENST00000559844 STRNO43815 780 aa19.77■□□□□ 0.76
SNX1-208ENST00000559844 FKTNO75072 461 aa19.77■□□□□ 0.76
SNX1-208ENST00000559844 ZNF76P36508 570 aa19.77■□□□□ 0.76
SNX1-208ENST00000559844 GHRHRQ02643 423 aa19.77■□□□□ 0.76
SNX1-208ENST00000559844 TRIM14Q14142 442 aa19.77■□□□□ 0.76
SNX1-208ENST00000559844 CEP135Q66GS9 1140 aa19.77■□□□□ 0.76
SNX1-208ENST00000559844 PANX2Q96RD6 677 aa19.77■□□□□ 0.76
SNX1-208ENST00000559844 SRRTQ9BXP5 876 aaKnown RBP19.77■□□□□ 0.76
SNX1-208ENST00000559844 PGK2P07205 417 aa19.77■□□□□ 0.75
SNX1-208ENST00000559844 ADORA2AP29274 412 aa19.77■□□□□ 0.75
SNX1-208ENST00000559844 PMS1P54277 932 aaKnown RBP19.77■□□□□ 0.75
SNX1-208ENST00000559844 TMEM139Q8IV31 216 aa19.77■□□□□ 0.75
SNX1-208ENST00000559844 ABRAQ8N0Z2 381 aa19.77■□□□□ 0.75
SNX1-208ENST00000559844 CSGALNACT2Q8N6G5 542 aa19.77■□□□□ 0.75
SNX1-208ENST00000559844 CD99L2Q8TCZ2 262 aa19.77■□□□□ 0.75
SNX1-208ENST00000559844 DDX12PQ92771 950 aa19.77■□□□□ 0.75
SNX1-208ENST00000559844 CCDC51Q96ER9 411 aa19.77■□□□□ 0.75
SNX1-208ENST00000559844 TAB2Q9NYJ8 693 aa19.77■□□□□ 0.75
SNX1-208ENST00000559844 MAP3K20Q9NYL2 800 aaKnown RBP19.77■□□□□ 0.75
SNX1-208ENST00000559844 GRB14Q14449 540 aa19.76■□□□□ 0.75
SNX1-208ENST00000559844 ECM1Q16610 540 aa19.76■□□□□ 0.75
SNX1-208ENST00000559844 DYMQ7RTS9 669 aa19.76■□□□□ 0.75
SNX1-208ENST00000559844 KCNK18Q7Z418 384 aa19.76■□□□□ 0.75
SNX1-208ENST00000559844 SAMD3Q8N6K7 520 aa19.76■□□□□ 0.75
SNX1-208ENST00000559844 SYTL5Q8TDW5 730 aaPredicted RBP19.76■□□□□ 0.75
SNX1-208ENST00000559844 GJA10Q969M2 543 aa19.76■□□□□ 0.75
SNX1-208ENST00000559844 LENG9Q96B70 501 aa19.76■□□□□ 0.75
SNX1-208ENST00000559844 PPP1R13BQ96KQ4 1090 aa19.76■□□□□ 0.75
SNX1-208ENST00000559844 NAA15Q9BXJ9 866 aaKnown RBP19.76■□□□□ 0.75
SNX1-208ENST00000559844 VPS16Q9H269 839 aa19.76■□□□□ 0.75
SNX1-208ENST00000559844 COL20A1Q9P218 1284 aa19.76■□□□□ 0.75
SNX1-208ENST00000559844 FAM86B1E9PN63 330 aa19.75■□□□□ 0.75
SNX1-208ENST00000559844 DYNC1I1O14576 645 aa19.75■□□□□ 0.75
SNX1-208ENST00000559844 ZSCAN12O43309 604 aa19.75■□□□□ 0.75
SNX1-208ENST00000559844 FAM86B2P0C5J1 330 aa19.75■□□□□ 0.75
SNX1-208ENST00000559844 CAP1Q01518 475 aa19.75■□□□□ 0.75
SNX1-208ENST00000559844 IRF2BP1Q8IU81 584 aa19.75■□□□□ 0.75
SNX1-208ENST00000559844 CNGA4Q8IV77 575 aa19.75■□□□□ 0.75
SNX1-208ENST00000559844 GUF1Q8N442 669 aaKnown RBP19.75■□□□□ 0.75
SNX1-208ENST00000559844 KIAA0895Q8NCT3 520 aa19.75■□□□□ 0.75
SNX1-208ENST00000559844 ERO1AQ96HE7 468 aa19.75■□□□□ 0.75
SNX1-208ENST00000559844 PURBQ96QR8 312 aaKnown RBP19.75■□□□□ 0.75
SNX1-208ENST00000559844 DUSP9Q99956 384 aaKnown RBP19.75■□□□□ 0.75
SNX1-208ENST00000559844 MAF1Q9H063 256 aa19.75■□□□□ 0.75
SNX1-208ENST00000559844 MCM3APO60318 1980 aa19.75■□□□□ 0.75
SNX1-208ENST00000559844 SLC15A5A6NIM6 579 aa19.75■□□□□ 0.75
SNX1-208ENST00000559844 POTEB2H3BUK9 544 aa19.75■□□□□ 0.75
SNX1-208ENST00000559844 GTF2F1P35269 517 aaKnown RBP eCLIP19.75■□□□□ 0.75
SNX1-208ENST00000559844 ADKP55263 362 aaKnown RBP19.75■□□□□ 0.75
SNX1-208ENST00000559844 CNTN2Q02246 1040 aa19.75■□□□□ 0.75
SNX1-208ENST00000559844 SPIRE1Q08AE8 756 aa19.75■□□□□ 0.75
SNX1-208ENST00000559844 GOLGA8FQ08AF8 430 aa19.75■□□□□ 0.75
SNX1-208ENST00000559844 GOLGA8DPQ0D2H9 430 aa19.75■□□□□ 0.75
SNX1-208ENST00000559844 CREBRFQ8IUR6 639 aa19.75■□□□□ 0.75
SNX1-208ENST00000559844 KCTD17Q8N5Z5 321 aa19.75■□□□□ 0.75
SNX1-208ENST00000559844 SLC39A2Q9NP94 309 aa19.75■□□□□ 0.75
SNX1-208ENST00000559844 KIAA1024Q9UPX6 916 aa19.75■□□□□ 0.75
SNX1-208ENST00000559844 FGFR1OPO95684 399 aaKnown RBP19.74■□□□□ 0.75
SNX1-208ENST00000559844 HSPA1AP0DMV8 641 aaKnown RBP19.74■□□□□ 0.75
SNX1-208ENST00000559844 HSPA1BP0DMV9 641 aaKnown RBP19.74■□□□□ 0.75
SNX1-208ENST00000559844 IDEP14735 1019 aa19.74■□□□□ 0.75
SNX1-208ENST00000559844 EHHADHQ08426 723 aa19.74■□□□□ 0.75
SNX1-208ENST00000559844 RBL2Q08999 1139 aa19.74■□□□□ 0.75
SNX1-208ENST00000559844 ANKRD40Q6AI12 368 aa19.74■□□□□ 0.75
SNX1-208ENST00000559844 CENPPQ6IPU0 288 aa19.74■□□□□ 0.75
SNX1-208ENST00000559844 FOXR2Q6PJQ5 311 aa19.74■□□□□ 0.75
SNX1-208ENST00000559844 DNAJC25-GNG10A0A024R161 153 aa19.74■□□□□ 0.75
SNX1-208ENST00000559844 LGALS16A8MUM7 142 aa19.74■□□□□ 0.75
SNX1-208ENST00000559844 MSH4O15457 936 aa19.74■□□□□ 0.75
SNX1-208ENST00000559844 PLA2G4BP0C869 781 aa19.74■□□□□ 0.75
SNX1-208ENST00000559844 MORN1Q5T089 497 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms