RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 SLC8A3P57103 927 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 IFI16Q16666 785 aaKnown RBP11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 PADI6Q6TGC4 694 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 DDX12PQ92771 950 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 PPP1R13BQ96KQ4 1090 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 FAM193BQ96PV7 902 aaPredicted RBP11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 PARP2Q9UGN5 583 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 ALS2Q96Q42 1657 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 RGPD2P0DJD1 1756 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 KCNJ18B7U540 433 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 KCNJ12Q14500 433 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 DPCR1Q3MIW9 517 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 GBP6Q6ZN66 633 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 C11orf57Q6ZUT1 292 aaPredicted RBP11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 KIFAP3Q92845 792 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 FAM167AQ96KS9 214 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 FAM170AA1A519 330 aa11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 TMEM110-MUSTN1A8MSY1 372 aa11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 ZBTB22O15209 634 aa11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 PTPRAP18433 802 aa11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 GBP2P32456 591 aaPredicted RBP11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 KRT83P78385 493 aa11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 MSANTD4Q8NCY6 345 aa11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 RPS6KC1Q96S38 1066 aa11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 JPH1Q9HDC5 661 aaPredicted RBP11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 MKRN1Q9UHC7 482 aaKnown RBP11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 KCPQ6ZWJ8 1503 aa11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 KRT86O43790 486 aa11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 PGK2P07205 417 aa11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 GCLCP48506 637 aaPredicted RBP11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 HERVK_113P62684 666 aa11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 EVX2Q03828 476 aa11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 SPATA1Q5VX52 437 aa11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 DYDC1Q8WWB3 177 aa11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 ACCSQ96QU6 501 aa11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 NAPGQ99747 312 aaPredicted RBP11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 LXNQ9BS40 222 aa11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 PDHXO00330 501 aa11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 CDC25BP30305 580 aa11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 ADKP55263 362 aaKnown RBP11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 KMT5BQ4FZB7 885 aa11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 CATSPER4Q7RTX7 472 aa11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 ZBTB33Q86T24 672 aa11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 MMS19Q96T76 1030 aa11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 METTL14Q9HCE5 456 aaKnown RBP11.65□□□□□ -0.54
CARMIL3-202ENST00000559694 IRF6O14896 467 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 TNNC2P02585 160 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 STAT5BP51692 787 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 PSMC5P62195 406 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 ATP2C1P98194 919 aaPredicted RBP11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 FKBP3Q00688 224 aaKnown RBP11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 BRD3Q15059 726 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 CHADLQ6NUI6 762 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 C7orf31Q8N865 590 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 MCPH1Q8NEM0 835 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 ZC3H15Q8WU90 426 aaKnown RBP11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 P2RX7Q99572 595 aaKnown RBP11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 EIF2AK1Q9BQI3 630 aaKnown RBP11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 NUB1Q9Y5A7 615 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 PNMA6AP0CW24 399 aaPredicted RBP11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 BCRP11274 1271 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 GNAT1P11488 350 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 MAP2K1Q02750 393 aaPredicted RBP11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 RESP18Q5W5W9 173 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 OR6J1Q8NGC5 347 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 IL17RAQ96F46 866 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 DESI2Q9BSY9 194 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 TAF1DQ9H5J8 278 aaPredicted RBP11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 PFASO15067 1338 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 CYP2C8P10632 490 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 PPATQ06203 517 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 KCNV1Q6PIU1 500 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 FMNL3Q8IVF7 1028 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 ZNF579Q8NAF0 562 aaKnown RBP11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 GMCL1P1Q8NEA9 526 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 MAN1B1Q9UKM7 699 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 KCNH4Q9UQ05 1017 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 STRCQ7RTU9 1775 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 NDUFAB1O14561 156 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 MYL1P05976 194 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 ORC2Q13416 577 aaPredicted RBP11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 EPHA7Q15375 998 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 RRAGAQ7L523 313 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 PPM1KQ8N3J5 372 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 SLC17A8Q8NDX2 589 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 PSPC1Q8WXF1 523 aaKnown RBP11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 P2RX5Q93086 422 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 PPP2R2CQ9Y2T4 447 aa11.64□□□□□ -0.55
CARMIL3-202ENST00000559694 NFIBO00712 420 aa11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 CUL4BQ13620 913 aa11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 VWA3BQ502W6 1294 aa11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 SCFD2Q8WU76 684 aa11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 SEPT1Q8WYJ6 367 aa11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 GDAP1L1Q96MZ0 367 aa11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 NUP58Q9BVL2 599 aa11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 TAL1P17542 331 aaPredicted RBP11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 CCDC122Q5T0U0 273 aa11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 ZNF658Q5TYW1 1059 aaPredicted RBP11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 ZNF710Q8N1W2 664 aa11.63□□□□□ -0.55
CARMIL3-202ENST00000559694 DHTKD1Q96HY7 919 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms