RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 RBPJLQ9UBG7 517 aa4.92□□□□□ -1.62
CASC4-210ENST00000559550 SRPK3Q9UPE1 567 aa4.92□□□□□ -1.62
CASC4-210ENST00000559550 ZNF561-AS1K7EIQ3 104 aa4.91□□□□□ -1.62
CASC4-210ENST00000559550 MAN2B1O00754 1011 aa4.91□□□□□ -1.62
CASC4-210ENST00000559550 MAFKO60675 156 aa4.91□□□□□ -1.62
CASC4-210ENST00000559550 CYP2C8P10632 490 aa4.91□□□□□ -1.62
CASC4-210ENST00000559550 KRT15P19012 456 aa4.91□□□□□ -1.62
CASC4-210ENST00000559550 PABPC4Q13310 644 aaKnown RBP eCLIP4.91□□□□□ -1.62
CASC4-210ENST00000559550 GPR19Q15760 415 aa4.91□□□□□ -1.62
CASC4-210ENST00000559550 TEPPQ6URK8 271 aa4.91□□□□□ -1.62
CASC4-210ENST00000559550 KCTD1Q719H9 257 aa4.91□□□□□ -1.62
CASC4-210ENST00000559550 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.91□□□□□ -1.62
CASC4-210ENST00000559550 TRIM48Q8IWZ4 208 aa4.91□□□□□ -1.62
CASC4-210ENST00000559550 CISD2Q8N5K1 135 aaKnown RBP4.91□□□□□ -1.62
CASC4-210ENST00000559550 IGSF22Q8N9C0 903 aa4.91□□□□□ -1.62
CASC4-210ENST00000559550 TTLL11Q8NHH1 800 aa4.91□□□□□ -1.62
CASC4-210ENST00000559550 ZNF526Q8TF50 670 aaPredicted RBP4.91□□□□□ -1.62
CASC4-210ENST00000559550 APPBP2Q92624 585 aa4.91□□□□□ -1.62
CASC4-210ENST00000559550 TOE1Q96GM8 510 aaKnown RBP4.91□□□□□ -1.62
CASC4-210ENST00000559550 YIPF4Q9BSR8 244 aa4.91□□□□□ -1.62
CASC4-210ENST00000559550 CELF4Q9BZC1 486 aaKnown RBP4.91□□□□□ -1.62
CASC4-210ENST00000559550 TNPO3Q9Y5L0 923 aaKnown RBP4.91□□□□□ -1.62
CASC4-210ENST00000559550 PMF1-BGLAPU3KQ54 211 aa4.91□□□□□ -1.62
CASC4-210ENST00000559550 ACOT7O00154 380 aa4.9□□□□□ -1.63
CASC4-210ENST00000559550 CDC45O75419 566 aa4.9□□□□□ -1.63
CASC4-210ENST00000559550 RFPL3O75679 317 aa4.9□□□□□ -1.63
CASC4-210ENST00000559550 EPHA5P54756 1037 aa4.9□□□□□ -1.63
CASC4-210ENST00000559550 ITGA1P56199 1179 aa4.9□□□□□ -1.63
CASC4-210ENST00000559550 ST5P78524 1137 aa4.9□□□□□ -1.63
CASC4-210ENST00000559550 LACTBP83111 547 aaPredicted RBP4.9□□□□□ -1.63
CASC4-210ENST00000559550 SMAD4Q13485 552 aaKnown RBP4.9□□□□□ -1.63
CASC4-210ENST00000559550 SEC23AQ15436 765 aa4.9□□□□□ -1.63
CASC4-210ENST00000559550 TCEA2Q15560 299 aa4.9□□□□□ -1.63
CASC4-210ENST00000559550 FAM47CQ5HY64 1035 aa4.9□□□□□ -1.63
CASC4-210ENST00000559550 ZC3H18Q86VM9 953 aaKnown RBP4.9□□□□□ -1.63
CASC4-210ENST00000559550 PROSER1Q86XN7 944 aa4.9□□□□□ -1.63
CASC4-210ENST00000559550 LINC00482Q8N8I6 264 aa4.9□□□□□ -1.63
CASC4-210ENST00000559550 PDGFDQ9GZP0 370 aaPredicted RBP4.9□□□□□ -1.63
CASC4-210ENST00000559550 TLDC2A0PJX2 215 aa4.89□□□□□ -1.63
CASC4-210ENST00000559550 FAM83GA6ND36 823 aa4.89□□□□□ -1.63
CASC4-210ENST00000559550 FAM90A27PA6NNH2 459 aa4.89□□□□□ -1.63
CASC4-210ENST00000559550 THBS2P35442 1172 aa4.89□□□□□ -1.63
CASC4-210ENST00000559550 NKX3-2P78367 333 aa4.89□□□□□ -1.63
CASC4-210ENST00000559550 CRY1Q16526 586 aa4.89□□□□□ -1.63
CASC4-210ENST00000559550 PAN2Q504Q3 1202 aaKnown RBP4.89□□□□□ -1.63
CASC4-210ENST00000559550 TM4SF20Q53R12 229 aa4.89□□□□□ -1.63
CASC4-210ENST00000559550 TMC5Q6UXY8 1006 aa4.89□□□□□ -1.63
CASC4-210ENST00000559550 OVCH1Q7RTY7 1134 aa4.89□□□□□ -1.63
CASC4-210ENST00000559550 SPRED1Q7Z699 444 aa4.89□□□□□ -1.63
CASC4-210ENST00000559550 KIAA0907Q7Z7F0 614 aaPredicted RBP4.89□□□□□ -1.63
CASC4-210ENST00000559550 SYNPOQ8N3V7 929 aa4.89□□□□□ -1.63
CASC4-210ENST00000559550 ZBTB8AQ96BR9 441 aa4.89□□□□□ -1.63
CASC4-210ENST00000559550 C11orf84Q9BUA3 381 aaPredicted RBP4.89□□□□□ -1.63
CASC4-210ENST00000559550 SSBP3Q9BWW4 388 aaPredicted RBP4.89□□□□□ -1.63
CASC4-210ENST00000559550 SPATA6Q9NWH7 488 aaPredicted RBP4.89□□□□□ -1.63
CASC4-210ENST00000559550 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.88□□□□□ -1.63
CASC4-210ENST00000559550 ENPP3O14638 875 aa4.88□□□□□ -1.63
CASC4-210ENST00000559550 GSTA4O15217 222 aa4.88□□□□□ -1.63
CASC4-210ENST00000559550 OPA1O60313 960 aa4.88□□□□□ -1.63
CASC4-210ENST00000559550 GLRX3O76003 335 aaKnown RBP4.88□□□□□ -1.63
CASC4-210ENST00000559550 FAHP16930 419 aa4.88□□□□□ -1.63
CASC4-210ENST00000559550 PTPN1P18031 435 aaKnown RBP4.88□□□□□ -1.63
CASC4-210ENST00000559550 TGM1P22735 817 aa4.88□□□□□ -1.63
CASC4-210ENST00000559550 IGFALSP35858 605 aa4.88□□□□□ -1.63
CASC4-210ENST00000559550 ADAM9Q13443 819 aa4.88□□□□□ -1.63
CASC4-210ENST00000559550 TMEM177Q53S58 311 aa4.88□□□□□ -1.63
CASC4-210ENST00000559550 FIGNQ5HY92 759 aa4.88□□□□□ -1.63
CASC4-210ENST00000559550 ZCCHC8Q6NZY4 707 aaKnown RBP4.88□□□□□ -1.63
CASC4-210ENST00000559550 NOSTRINQ8IVI9 506 aa4.88□□□□□ -1.63
CASC4-210ENST00000559550 DHX37Q8IY37 1157 aaKnown RBP4.88□□□□□ -1.63
CASC4-210ENST00000559550 PCED1AQ9H1Q7 454 aa4.88□□□□□ -1.63
CASC4-210ENST00000559550 HSPBP1Q9NZL4 362 aa4.88□□□□□ -1.63
CASC4-210ENST00000559550 SAMD15Q9P1V8 674 aa4.88□□□□□ -1.63
CASC4-210ENST00000559550 ATP23Q9Y6H3 246 aa4.88□□□□□ -1.63
CASC4-210ENST00000559550 M0R2C6 588 aa4.87□□□□□ -1.63
CASC4-210ENST00000559550 ASLP04424 464 aa4.87□□□□□ -1.63
CASC4-210ENST00000559550 MECP2P51608 486 aaKnown RBP4.87□□□□□ -1.63
CASC4-210ENST00000559550 CDSNQ15517 529 aa4.87□□□□□ -1.63
CASC4-210ENST00000559550 DALRD3Q5D0E6 543 aaKnown RBP4.87□□□□□ -1.63
CASC4-210ENST00000559550 PHF19Q5T6S3 580 aa4.87□□□□□ -1.63
CASC4-210ENST00000559550 BTBD8Q5XKL5 378 aa4.87□□□□□ -1.63
CASC4-210ENST00000559550 NLGN4XQ8N0W4 816 aa4.87□□□□□ -1.63
CASC4-210ENST00000559550 CARFQ8N187 725 aa4.87□□□□□ -1.63
CASC4-210ENST00000559550 KYQ8NBH2 561 aa4.87□□□□□ -1.63
CASC4-210ENST00000559550 NINJ1Q92982 152 aa4.87□□□□□ -1.63
CASC4-210ENST00000559550 LOXL4Q96JB6 756 aa4.87□□□□□ -1.63
CASC4-210ENST00000559550 ZSWIM3Q96MP5 696 aa4.87□□□□□ -1.63
CASC4-210ENST00000559550 FEZ1Q99689 392 aa4.87□□□□□ -1.63
CASC4-210ENST00000559550 NGRNQ9NPE2 291 aaKnown RBP4.87□□□□□ -1.63
CASC4-210ENST00000559550 RIC8BQ9NVN3 520 aa4.87□□□□□ -1.63
CASC4-210ENST00000559550 TMA7Q9Y2S6 64 aaKnown RBP4.87□□□□□ -1.63
CASC4-210ENST00000559550 NUB1Q9Y5A7 615 aa4.87□□□□□ -1.63
CASC4-210ENST00000559550 SCDO00767 359 aa4.86□□□□□ -1.63
CASC4-210ENST00000559550 C4BPAP04003 597 aaKnown RBP4.86□□□□□ -1.63
CASC4-210ENST00000559550 JMJD7P0C870 316 aa4.86□□□□□ -1.63
CASC4-210ENST00000559550 TBC1D10BQ4KMP7 808 aaPredicted RBP4.86□□□□□ -1.63
CASC4-210ENST00000559550 PLEKHG4Q58EX7 1191 aa4.86□□□□□ -1.63
CASC4-210ENST00000559550 CD276Q5ZPR3 534 aa4.86□□□□□ -1.63
CASC4-210ENST00000559550 CDCA2Q69YH5 1023 aaPredicted RBP4.86□□□□□ -1.63
CASC4-210ENST00000559550 SDE2Q6IQ49 451 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms