RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ZP2Q05996 745 aa8.92□□□□□ -0.98
SPG11-213ENST00000558988 SPP2Q13103 211 aa8.92□□□□□ -0.98
SPG11-213ENST00000558988 MOGSQ13724 837 aa8.92□□□□□ -0.98
SPG11-213ENST00000558988 TMEM67Q5HYA8 995 aa8.92□□□□□ -0.98
SPG11-213ENST00000558988 C17orf99Q6UX52 265 aa8.92□□□□□ -0.98
SPG11-213ENST00000558988 CAPN12Q6ZSI9 719 aa8.92□□□□□ -0.98
SPG11-213ENST00000558988 FASTKD5Q7L8L6 764 aaKnown RBP8.92□□□□□ -0.98
SPG11-213ENST00000558988 PRRT2Q7Z6L0 340 aaPredicted RBP8.92□□□□□ -0.98
SPG11-213ENST00000558988 EAF2Q96CJ1 260 aaPredicted RBP8.92□□□□□ -0.98
SPG11-213ENST00000558988 ZNF333Q96JL9 665 aa8.92□□□□□ -0.98
SPG11-213ENST00000558988 CHRDQ9H2X0 955 aa8.92□□□□□ -0.98
SPG11-213ENST00000558988 NSUN3Q9H649 340 aaKnown RBP8.92□□□□□ -0.98
SPG11-213ENST00000558988 AFG3L2Q9Y4W6 797 aa8.92□□□□□ -0.98
SPG11-213ENST00000558988 MAST2Q6P0Q8 1798 aa8.91□□□□□ -0.98
SPG11-213ENST00000558988 MYPNQ86TC9 1320 aa8.91□□□□□ -0.98
SPG11-213ENST00000558988 PSPNO60542 156 aa8.91□□□□□ -0.98
SPG11-213ENST00000558988 HMGCS2P54868 508 aa8.91□□□□□ -0.98
SPG11-213ENST00000558988 FCGRTP55899 365 aa8.91□□□□□ -0.98
SPG11-213ENST00000558988 NAA30Q147X3 362 aaPredicted RBP8.91□□□□□ -0.98
SPG11-213ENST00000558988 TREML2Q5T2D2 321 aa8.91□□□□□ -0.98
SPG11-213ENST00000558988 ANKRD13CQ8N6S4 541 aa8.91□□□□□ -0.98
SPG11-213ENST00000558988 FAM200AQ8TCP9 573 aa8.91□□□□□ -0.98
SPG11-213ENST00000558988 KIRREL1Q96J84 757 aa8.91□□□□□ -0.98
SPG11-213ENST00000558988 GPR108Q9NPR9 543 aa8.91□□□□□ -0.98
SPG11-213ENST00000558988 SRRDQ9UH36 339 aa8.91□□□□□ -0.98
SPG11-213ENST00000558988 PALD1Q9ULE6 856 aa8.91□□□□□ -0.98
SPG11-213ENST00000558988 FLT1P17948 1338 aa8.9□□□□□ -0.98
SPG11-213ENST00000558988 ADGRA2Q96PE1 1338 aa8.9□□□□□ -0.98
SPG11-213ENST00000558988 ATAD5Q96QE3 1844 aa8.9□□□□□ -0.98
SPG11-213ENST00000558988 TNPO2O14787 897 aaKnown RBP8.9□□□□□ -0.98
SPG11-213ENST00000558988 NUAK1O60285 661 aa8.9□□□□□ -0.98
SPG11-213ENST00000558988 EIF4EBP3O60516 100 aaPredicted RBP8.9□□□□□ -0.98
SPG11-213ENST00000558988 LEFTY1O75610 366 aa8.9□□□□□ -0.98
SPG11-213ENST00000558988 HOXD10P28358 340 aa8.9□□□□□ -0.98
SPG11-213ENST00000558988 USP5P45974 858 aa8.9□□□□□ -0.98
SPG11-213ENST00000558988 PRKCZQ05513 592 aa8.9□□□□□ -0.98
SPG11-213ENST00000558988 IKZF1Q13422 519 aa8.9□□□□□ -0.98
SPG11-213ENST00000558988 RRP1BQ14684 758 aaKnown RBP8.9□□□□□ -0.98
SPG11-213ENST00000558988 POU4F3Q15319 338 aa8.9□□□□□ -0.98
SPG11-213ENST00000558988 SHROOM1Q2M3G4 852 aaPredicted RBP8.9□□□□□ -0.98
SPG11-213ENST00000558988 ERC1Q8IUD2 1116 aa8.9□□□□□ -0.98
SPG11-213ENST00000558988 MAGEB6Q8N7X4 407 aa8.9□□□□□ -0.98
SPG11-213ENST00000558988 DNAJC2Q99543 621 aaKnown RBP8.9□□□□□ -0.98
SPG11-213ENST00000558988 BHLHE41Q9C0J9 482 aaPredicted RBP8.9□□□□□ -0.98
SPG11-213ENST00000558988 ANTXR1Q9H6X2 564 aa8.9□□□□□ -0.98
SPG11-213ENST00000558988 GABRQQ9UN88 632 aa8.9□□□□□ -0.98
SPG11-213ENST00000558988 AGTPBP1Q9UPW5 1226 aa8.9□□□□□ -0.98
SPG11-213ENST00000558988 NOP58Q9Y2X3 529 aaKnown RBP8.9□□□□□ -0.98
SPG11-213ENST00000558988 PTPRFP10586 1907 aa8.9□□□□□ -0.99
SPG11-213ENST00000558988 TCAF2A6NFQ2 919 aa8.89□□□□□ -0.99
SPG11-213ENST00000558988 ECEL1O95672 775 aa8.89□□□□□ -0.99
SPG11-213ENST00000558988 HLA-DOAP06340 250 aa8.89□□□□□ -0.99
SPG11-213ENST00000558988 IFIT2P09913 472 aaKnown RBP8.89□□□□□ -0.99
SPG11-213ENST00000558988 GRK4P32298 578 aa8.89□□□□□ -0.99
SPG11-213ENST00000558988 CAP2P40123 477 aa8.89□□□□□ -0.99
SPG11-213ENST00000558988 ZYXQ15942 572 aaKnown RBP8.89□□□□□ -0.99
SPG11-213ENST00000558988 HP1BP3Q5SSJ5 553 aaPredicted RBP8.89□□□□□ -0.99
SPG11-213ENST00000558988 STIM2Q9P246 746 aa8.89□□□□□ -0.99
SPG11-213ENST00000558988 PI4KBQ9UBF8 816 aa8.89□□□□□ -0.99
SPG11-213ENST00000558988 RCAN3Q9UKA8 241 aa8.89□□□□□ -0.99
SPG11-213ENST00000558988 PHIPQ8WWQ0 1821 aa8.89□□□□□ -0.99
SPG11-213ENST00000558988 CDK5RAP2Q96SN8 1893 aa8.88□□□□□ -0.99
SPG11-213ENST00000558988 PRMT3O60678 531 aa8.88□□□□□ -0.99
SPG11-213ENST00000558988 PEX10O60683 326 aa8.88□□□□□ -0.99
SPG11-213ENST00000558988 MAP4K4O95819 1239 aaPredicted RBP8.88□□□□□ -0.99
SPG11-213ENST00000558988 CYP11A1P05108 521 aa8.88□□□□□ -0.99
SPG11-213ENST00000558988 ITIH2P19823 946 aa8.88□□□□□ -0.99
SPG11-213ENST00000558988 PRMT2P55345 433 aa8.88□□□□□ -0.99
SPG11-213ENST00000558988 IRX3P78415 501 aaPredicted RBP8.88□□□□□ -0.99
SPG11-213ENST00000558988 KRTAP1-1Q07627 177 aa8.88□□□□□ -0.99
SPG11-213ENST00000558988 MAP3K12Q12852 859 aa8.88□□□□□ -0.99
SPG11-213ENST00000558988 HSP90AB4PQ58FF6 505 aa8.88□□□□□ -0.99
SPG11-213ENST00000558988 XKR5Q6UX68 686 aa8.88□□□□□ -0.99
SPG11-213ENST00000558988 CLASRPQ8N2M8 674 aaKnown RBP8.88□□□□□ -0.99
SPG11-213ENST00000558988 FEZ1Q99689 392 aa8.88□□□□□ -0.99
SPG11-213ENST00000558988 DHX36Q9H2U1 1008 aaKnown RBP8.88□□□□□ -0.99
SPG11-213ENST00000558988 DNAJC18Q9H819 358 aa8.88□□□□□ -0.99
SPG11-213ENST00000558988 AS3MTQ9HBK9 375 aa8.88□□□□□ -0.99
SPG11-213ENST00000558988 TMOD4Q9NZQ9 345 aa8.88□□□□□ -0.99
SPG11-213ENST00000558988 HERC5Q9UII4 1024 aaKnown RBP8.88□□□□□ -0.99
SPG11-213ENST00000558988 PPP1R9AQ9ULJ8 1098 aa8.88□□□□□ -0.99
SPG11-213ENST00000558988 SMG5Q9UPR3 1016 aaKnown RBP8.88□□□□□ -0.99
SPG11-213ENST00000558988 MGAMO43451 1857 aa8.87□□□□□ -0.99
SPG11-213ENST00000558988 SIPA1L1O43166 1804 aa8.87□□□□□ -0.99
SPG11-213ENST00000558988 RBBP6Q7Z6E9 1792 aaKnown RBP8.87□□□□□ -0.99
SPG11-213ENST00000558988 GOLIM4O00461 696 aa8.87□□□□□ -0.99
SPG11-213ENST00000558988 ADCY3O60266 1144 aa8.87□□□□□ -0.99
SPG11-213ENST00000558988 HMMRO75330 724 aa8.87□□□□□ -0.99
SPG11-213ENST00000558988 GH2P01242 217 aa8.87□□□□□ -0.99
SPG11-213ENST00000558988 MED14OSP0DP75 135 aa8.87□□□□□ -0.99
SPG11-213ENST00000558988 CCL5P13501 91 aa8.87□□□□□ -0.99
SPG11-213ENST00000558988 FLT3LGP49771 235 aa8.87□□□□□ -0.99
SPG11-213ENST00000558988 UBXN2AP68543 259 aa8.87□□□□□ -0.99
SPG11-213ENST00000558988 C20orf194Q5TEA3 1177 aa8.87□□□□□ -0.99
SPG11-213ENST00000558988 GLMNQ92990 594 aa8.87□□□□□ -0.99
SPG11-213ENST00000558988 PMEPA1Q969W9 287 aa8.87□□□□□ -0.99
SPG11-213ENST00000558988 COA7Q96BR5 231 aa8.87□□□□□ -0.99
SPG11-213ENST00000558988 EDC3Q96F86 508 aaKnown RBP8.87□□□□□ -0.99
SPG11-213ENST00000558988 ZNF512BQ96KM6 892 aaPredicted RBP8.87□□□□□ -0.99
SPG11-213ENST00000558988 PPP1R12CQ9BZL4 782 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms